RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 IGHV6-1A0A0B4J1U7 121 aa10.91□□□□□ -0.66
VARS-224ENST00000479051 C20orf166-AS1Q96NR2 134 aa10.9□□□□□ -0.66
VARS-224ENST00000479051 GTF2H5Q6ZYL4 71 aa10.89□□□□□ -0.67
VARS-224ENST00000479051 A0A1B0GVX0 72 aa10.88□□□□□ -0.67
VARS-224ENST00000479051 C8orf87E5RJ46 101 aa10.88□□□□□ -0.67
VARS-224ENST00000479051 NDUFB1O75438 58 aa10.88□□□□□ -0.67
VARS-224ENST00000479051 NREPQ16612 68 aa10.88□□□□□ -0.67
VARS-224ENST00000479051 A8MUU9 505 aa10.87□□□□□ -0.67
VARS-224ENST00000479051 SMCPP49901 116 aaPredicted RBP10.85□□□□□ -0.67
VARS-224ENST00000479051 PRO0461Q9UI25 63 aa10.83□□□□□ -0.68
VARS-224ENST00000479051 NOTCH2NLQ7Z3S9 236 aa10.82□□□□□ -0.68
VARS-224ENST00000479051 KRTAP16-1A8MUX0 517 aa10.81□□□□□ -0.68
VARS-224ENST00000479051 A8MWP4 228 aa10.81□□□□□ -0.68
VARS-224ENST00000479051 FAT4Q6V0I7 4981 aa10.79□□□□□ -0.68
VARS-224ENST00000479051 F8W1H4 67 aa10.76□□□□□ -0.69
VARS-224ENST00000479051 IGKV3D-7A0A0C4DH55 119 aa10.73□□□□□ -0.69
VARS-224ENST00000479051 LCE2AQ5TA79 106 aaPredicted RBP10.73□□□□□ -0.69
VARS-224ENST00000479051 C8orf17Q9NRJ1 99 aa10.72□□□□□ -0.69
VARS-224ENST00000479051 BPY2O14599 106 aa10.71□□□□□ -0.69
VARS-224ENST00000479051 PRR15Q8IV56 129 aa10.71□□□□□ -0.69
VARS-224ENST00000479051 Q6ZVQ6 151 aa10.69□□□□□ -0.7
VARS-224ENST00000479051 COX6B2Q6YFQ2 88 aa10.66□□□□□ -0.7
VARS-224ENST00000479051 UBL5Q9BZL1 73 aa10.66□□□□□ -0.7
VARS-224ENST00000479051 ETDBQ3ZM63 59 aa10.65□□□□□ -0.7
VARS-224ENST00000479051 KRTAP19-2Q3LHN2 52 aa10.64□□□□□ -0.71
VARS-224ENST00000479051 K7EQZ3 153 aa10.63□□□□□ -0.71
VARS-224ENST00000479051 LCE2CQ5TA81 110 aa10.62□□□□□ -0.71
VARS-224ENST00000479051 Q8N9P0 234 aaPredicted RBP10.62□□□□□ -0.71
VARS-224ENST00000479051 LINC00846Q9NV44 126 aa10.61□□□□□ -0.71
VARS-224ENST00000479051 MMP24-AS1A0A0U1RRL7 71 aa10.6□□□□□ -0.71
VARS-224ENST00000479051 TMEM254Q8TBM7 123 aa10.59□□□□□ -0.71
VARS-224ENST00000479051 ZCCHC13Q8WW36 166 aaKnown RBP10.59□□□□□ -0.71
VARS-224ENST00000479051 hDV103S1A0JD37 113 aa10.57□□□□□ -0.72
VARS-224ENST00000479051 MRPL34Q9BQ48 92 aaKnown RBP10.57□□□□□ -0.72
VARS-224ENST00000479051 MT1HP80294 61 aa10.51□□□□□ -0.73
VARS-224ENST00000479051 Q8N9L7 120 aa10.51□□□□□ -0.73
VARS-224ENST00000479051 NDUFS5O43920 106 aa10.5□□□□□ -0.73
VARS-224ENST00000479051 CASC2Q6XLA1 102 aa10.48□□□□□ -0.73
VARS-224ENST00000479051 WFDC13Q8IUB5 93 aa10.47□□□□□ -0.73
VARS-224ENST00000479051 RBM12B-AS1Q9P1G2 102 aa10.46□□□□□ -0.73
VARS-224ENST00000479051 ACYP1P07311 99 aa10.45□□□□□ -0.74
VARS-224ENST00000479051 M0R2T5 61 aa10.44□□□□□ -0.74
VARS-224ENST00000479051 FAM236DA0A1B0GTK5 79 aa10.43□□□□□ -0.74
VARS-224ENST00000479051 A0A1B0GV90 55 aa10.43□□□□□ -0.74
VARS-224ENST00000479051 FAM236CP0DP71 79 aa10.43□□□□□ -0.74
VARS-224ENST00000479051 SPINK7P58062 85 aa10.43□□□□□ -0.74
VARS-224ENST00000479051 CXCL6P80162 114 aa10.43□□□□□ -0.74
VARS-224ENST00000479051 HRES1P13985 223 aa10.41□□□□□ -0.74
VARS-224ENST00000479051 FAM240AA0A1B0GVK7 77 aa10.4□□□□□ -0.74
VARS-224ENST00000479051 HCG22E2RYF7 251 aa10.4□□□□□ -0.74
VARS-224ENST00000479051 MPLKIPQ8TAP9 179 aa10.37□□□□□ -0.75
VARS-224ENST00000479051 FLGP20930 4061 aaPredicted RBP10.33□□□□□ -0.76
VARS-224ENST00000479051 ATP5EP2Q5VTU8 51 aa10.3□□□□□ -0.76
VARS-224ENST00000479051 KRTAP10-6P60371 365 aaPredicted RBP10.27□□□□□ -0.77
VARS-224ENST00000479051 Q5W150 140 aa10.26□□□□□ -0.77
VARS-224ENST00000479051 IGKV2D-30A0A075B6S6 120 aa10.25□□□□□ -0.77
VARS-224ENST00000479051 IGKV2-30P06310 120 aa10.25□□□□□ -0.77
VARS-224ENST00000479051 C7orf65Q6ZTY9 151 aa10.25□□□□□ -0.77
VARS-224ENST00000479051 LORP23490 312 aaPredicted RBP10.24□□□□□ -0.77
VARS-224ENST00000479051 TP53AIP1Q9HCN2 124 aa10.23□□□□□ -0.77
VARS-224ENST00000479051 KRTAP9-2Q9BYQ4 174 aa10.22□□□□□ -0.77
VARS-224ENST00000479051 J3QR89 54 aa10.2□□□□□ -0.78
VARS-224ENST00000479051 HIST1H4AP62805 103 aaKnown RBP10.19□□□□□ -0.78
VARS-224ENST00000479051 LINC00643Q86TS7 51 aa10.19□□□□□ -0.78
VARS-224ENST00000479051 LCE2DQ5TA82 110 aaPredicted RBP10.11□□□□□ -0.79
VARS-224ENST00000479051 H1FX-AS1Q4G0G2 97 aa10.04□□□□□ -0.8
VARS-224ENST00000479051 TRAV22A0A0B4J277 110 aa10.02□□□□□ -0.81
VARS-224ENST00000479051 A0A087WVE0 104 aa10.01□□□□□ -0.81
VARS-224ENST00000479051 C4orf26Q17RF5 130 aa10.01□□□□□ -0.81
VARS-224ENST00000479051 UQCRQO14949 82 aa9.99□□□□□ -0.81
VARS-224ENST00000479051 KRTAP9-8Q9BYQ0 159 aa9.97□□□□□ -0.81
VARS-224ENST00000479051 LOC101927531A0A1B0GV80 90 aa9.95□□□□□ -0.82
VARS-224ENST00000479051 ATOX1O00244 68 aa9.93□□□□□ -0.82
VARS-224ENST00000479051 CYP4F30PQ9H0H9 118 aa9.92□□□□□ -0.82
VARS-224ENST00000479051 K7ERU9 68 aa9.91□□□□□ -0.82
VARS-224ENST00000479051 H0Y9P7 68 aa9.9□□□□□ -0.82
VARS-224ENST00000479051 C1orf64Q8NEQ6 169 aa9.89□□□□□ -0.83
VARS-224ENST00000479051 MT2AP02795 61 aa9.88□□□□□ -0.83
VARS-224ENST00000479051 KRTAP10-10P60014 251 aa9.83□□□□□ -0.84
VARS-224ENST00000479051 MP68P56378 58 aa9.82□□□□□ -0.84
VARS-224ENST00000479051 OCR1Q9BZK8 76 aa9.82□□□□□ -0.84
VARS-224ENST00000479051 SCGB1A1P11684 91 aa9.81□□□□□ -0.84
VARS-224ENST00000479051 MT1FP04733 61 aa9.8□□□□□ -0.84
VARS-224ENST00000479051 KRTAP3-1Q9BYR8 98 aa9.8□□□□□ -0.84
VARS-224ENST00000479051 KRTAP9-6A0A140TA67 174 aa9.79□□□□□ -0.84
VARS-224ENST00000479051 S4R3F8 94 aa9.79□□□□□ -0.84
VARS-224ENST00000479051 IMUPQ9GZP8 106 aa9.78□□□□□ -0.84
VARS-224ENST00000479051 LINC00208Q96KT6 92 aa9.77□□□□□ -0.85
VARS-224ENST00000479051 C5orf47Q569G3 176 aa9.76□□□□□ -0.85
VARS-224ENST00000479051 MT-ATP8P03928 68 aa9.72□□□□□ -0.85
VARS-224ENST00000479051 CRCT1Q9UGL9 99 aa9.72□□□□□ -0.85
VARS-224ENST00000479051 H3BPC8 53 aa9.7□□□□□ -0.86
VARS-224ENST00000479051 CSAG1Q6PB30 78 aa9.68□□□□□ -0.86
VARS-224ENST00000479051 FSIP2Q5CZC0 6907 aa9.67□□□□□ -0.86
VARS-224ENST00000479051 LCA10Q71F78 164 aa9.67□□□□□ -0.86
VARS-224ENST00000479051 KRTAP9-3Q9BYQ3 159 aa9.66□□□□□ -0.86
VARS-224ENST00000479051 A8MUN3 132 aa9.62□□□□□ -0.87
VARS-224ENST00000479051 KLKP1Q107X0 134 aa9.62□□□□□ -0.87
VARS-224ENST00000479051 SMIM20Q8N5G0 67 aa9.61□□□□□ -0.87
VARS-224ENST00000479051 FAM236AA0A1B0GUQ0 79 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms