RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 LIMD2Q9BT23 127 aa8.06□□□□□ -1.12
HDAC7-221ENST00000477203 NDUFB1O75438 58 aa8.06□□□□□ -1.12
HDAC7-221ENST00000477203 ATP11AUNQ6ZP68 121 aa8.05□□□□□ -1.12
HDAC7-221ENST00000477203 FAT2Q9NYQ8 4349 aa8.05□□□□□ -1.12
HDAC7-221ENST00000477203 SPRR1BP22528 89 aa8.05□□□□□ -1.12
HDAC7-221ENST00000477203 KRTAP21-3Q3LHN1 58 aa8.05□□□□□ -1.12
HDAC7-221ENST00000477203 SPAG11AQ6PDA7 123 aa8.05□□□□□ -1.12
HDAC7-221ENST00000477203 PKD1P98161 4303 aa8.04□□□□□ -1.12
HDAC7-221ENST00000477203 IGLV8-61A0A075B6I0 122 aa8.03□□□□□ -1.12
HDAC7-221ENST00000477203 IGLV7-43P04211 117 aa8.03□□□□□ -1.12
HDAC7-221ENST00000477203 SACSQ9NZJ4 4579 aa8.03□□□□□ -1.12
HDAC7-221ENST00000477203 A6NN06 94 aa8.03□□□□□ -1.12
HDAC7-221ENST00000477203 H0Y9P7 68 aa8.03□□□□□ -1.12
HDAC7-221ENST00000477203 NDUFS5O43920 106 aa8.03□□□□□ -1.12
HDAC7-221ENST00000477203 SPINK6Q6UWN8 80 aa8.03□□□□□ -1.12
HDAC7-221ENST00000477203 PRAC1Q96KF2 57 aa8.03□□□□□ -1.12
HDAC7-221ENST00000477203 PCOTHQ58A44 107 aa8.01□□□□□ -1.13
HDAC7-221ENST00000477203 ALMS1Q8TCU4 4167 aa8□□□□□ -1.13
HDAC7-221ENST00000477203 C7orf65Q6ZTY9 151 aa8□□□□□ -1.13
HDAC7-221ENST00000477203 C8orf87E5RJ46 101 aa8□□□□□ -1.13
HDAC7-221ENST00000477203 SMR3BP02814 79 aaPredicted RBP8□□□□□ -1.13
HDAC7-221ENST00000477203 COA5Q86WW8 74 aa7.99□□□□□ -1.13
HDAC7-221ENST00000477203 H3BS24 57 aa7.98□□□□□ -1.13
HDAC7-221ENST00000477203 VPS13BQ7Z7G8 4022 aa7.98□□□□□ -1.13
HDAC7-221ENST00000477203 ZNF706Q9Y5V0 76 aaPredicted RBP7.98□□□□□ -1.13
HDAC7-221ENST00000477203 A0A1B0GW54 56 aa7.97□□□□□ -1.13
HDAC7-221ENST00000477203 KMT2CQ8NEZ4 4911 aaKnown RBP7.97□□□□□ -1.13
HDAC7-221ENST00000477203 Q75L30 129 aa7.96□□□□□ -1.14
HDAC7-221ENST00000477203 SPINK7P58062 85 aa7.95□□□□□ -1.14
HDAC7-221ENST00000477203 LINC00472Q9H8W2 130 aa7.95□□□□□ -1.14
HDAC7-221ENST00000477203 CDC42SE1Q9NRR8 79 aa7.95□□□□□ -1.14
HDAC7-221ENST00000477203 A0A087X002 238 aa7.94□□□□□ -1.14
HDAC7-221ENST00000477203 LOC101927531A0A1B0GV80 90 aa7.94□□□□□ -1.14
HDAC7-221ENST00000477203 LINC00483Q53H64 154 aa7.94□□□□□ -1.14
HDAC7-221ENST00000477203 ADM2Q7Z4H4 148 aa7.94□□□□□ -1.14
HDAC7-221ENST00000477203 IGHV6-1A0A0B4J1U7 121 aa7.94□□□□□ -1.14
HDAC7-221ENST00000477203 CASC2Q6XLA1 102 aa7.93□□□□□ -1.14
HDAC7-221ENST00000477203 FAT1Q14517 4588 aa7.9□□□□□ -1.14
HDAC7-221ENST00000477203 A8MWP4 228 aa7.9□□□□□ -1.14
HDAC7-221ENST00000477203 LINC00313P59037 77 aa7.9□□□□□ -1.14
HDAC7-221ENST00000477203 Q6ZSA8 131 aa7.89□□□□□ -1.15
HDAC7-221ENST00000477203 NOTCH2NLQ7Z3S9 236 aa7.88□□□□□ -1.15
HDAC7-221ENST00000477203 Q96NJ1 140 aa7.88□□□□□ -1.15
HDAC7-221ENST00000477203 CDK2AP2O75956 126 aa7.87□□□□□ -1.15
HDAC7-221ENST00000477203 SPANXA2-OT1Q8N9U9 137 aa7.87□□□□□ -1.15
HDAC7-221ENST00000477203 DYNC1H1Q14204 4646 aaKnown RBP7.86□□□□□ -1.15
HDAC7-221ENST00000477203 KRTAP13-2Q52LG2 175 aa7.85□□□□□ -1.15
HDAC7-221ENST00000477203 PLA2G1BP04054 148 aaKnown RBP7.83□□□□□ -1.16
HDAC7-221ENST00000477203 MMP24-AS1A0A0U1RRL7 71 aa7.83□□□□□ -1.16
HDAC7-221ENST00000477203 KRTAP29-1A8MX34 341 aaPredicted RBP7.82□□□□□ -1.16
HDAC7-221ENST00000477203 FLG2Q5D862 2391 aaPredicted RBP7.81□□□□□ -1.16
HDAC7-221ENST00000477203 RETNLBQ9BQ08 111 aa7.79□□□□□ -1.16
HDAC7-221ENST00000477203 C8orf17Q9NRJ1 99 aa7.79□□□□□ -1.16
HDAC7-221ENST00000477203 IGLV7-46A0A075B6I9 117 aa7.78□□□□□ -1.16
HDAC7-221ENST00000477203 PRR26Q8N8Z3 221 aa7.78□□□□□ -1.16
HDAC7-221ENST00000477203 A0A1B0GVX0 72 aa7.78□□□□□ -1.16
HDAC7-221ENST00000477203 LINC01558Q9Y6Z2 57 aa7.78□□□□□ -1.16
HDAC7-221ENST00000477203 RYR2Q92736 4967 aa7.77□□□□□ -1.16
HDAC7-221ENST00000477203 KRTAP1-4P0C5Y4 121 aa7.76□□□□□ -1.17
HDAC7-221ENST00000477203 LINC01554Q52M75 96 aa7.76□□□□□ -1.17
HDAC7-221ENST00000477203 H3BPC8 53 aa7.74□□□□□ -1.17
HDAC7-221ENST00000477203 SSBP3-AS1Q7Z2R9 100 aa7.74□□□□□ -1.17
HDAC7-221ENST00000477203 TYMSOSQ8TAI1 123 aa7.74□□□□□ -1.17
HDAC7-221ENST00000477203 HRES1P13985 223 aa7.74□□□□□ -1.17
HDAC7-221ENST00000477203 DMBT1Q9UGM3 2413 aaPredicted RBP7.72□□□□□ -1.17
HDAC7-221ENST00000477203 APOBP04114 4563 aaKnown RBP7.7□□□□□ -1.18
HDAC7-221ENST00000477203 A0A1B0GVY2 172 aa7.69□□□□□ -1.18
HDAC7-221ENST00000477203 RYR3Q15413 4870 aa7.69□□□□□ -1.18
HDAC7-221ENST00000477203 MRPL34Q9BQ48 92 aaKnown RBP7.69□□□□□ -1.18
HDAC7-221ENST00000477203 Q5W150 140 aa7.64□□□□□ -1.19
HDAC7-221ENST00000477203 CSAG1Q6PB30 78 aa7.63□□□□□ -1.19
HDAC7-221ENST00000477203 LRP1Q07954 4544 aaKnown RBP7.63□□□□□ -1.19
HDAC7-221ENST00000477203 LINC00304Q8N9R0 145 aa7.61□□□□□ -1.19
HDAC7-221ENST00000477203 ASB16-AS1Q495Z4 193 aa7.59□□□□□ -1.19
HDAC7-221ENST00000477203 C9orf92A6NGG3 77 aa7.57□□□□□ -1.2
HDAC7-221ENST00000477203 TP53AIP1Q9HCN2 124 aa7.56□□□□□ -1.2
HDAC7-221ENST00000477203 KIAA1109Q2LD37 5005 aa7.56□□□□□ -1.2
HDAC7-221ENST00000477203 A0A1B0GU69 56 aa7.56□□□□□ -1.2
HDAC7-221ENST00000477203 SPINK1P00995 79 aa7.53□□□□□ -1.2
HDAC7-221ENST00000477203 KRTAP10-4P60372 401 aaPredicted RBP7.53□□□□□ -1.2
HDAC7-221ENST00000477203 IGKV2D-30A0A075B6S6 120 aa7.5□□□□□ -1.21
HDAC7-221ENST00000477203 IGKV2-30P06310 120 aa7.5□□□□□ -1.21
HDAC7-221ENST00000477203 MIR22HGQ0VDD5 57 aa7.5□□□□□ -1.21
HDAC7-221ENST00000477203 MYCBP2O75592 4640 aa7.49□□□□□ -1.21
HDAC7-221ENST00000477203 HSPG2P98160 4391 aa7.49□□□□□ -1.21
HDAC7-221ENST00000477203 FAM229AH3BQW9 127 aa7.48□□□□□ -1.21
HDAC7-221ENST00000477203 Q5VSD8 79 aa7.48□□□□□ -1.21
HDAC7-221ENST00000477203 PKHD1L1Q86WI1 4243 aa7.47□□□□□ -1.21
HDAC7-221ENST00000477203 KRTAP17-1Q9BYP8 105 aa7.47□□□□□ -1.21
HDAC7-221ENST00000477203 ACYP2P14621 99 aa7.46□□□□□ -1.21
HDAC7-221ENST00000477203 EPPK1P58107 5090 aaKnown RBP7.45□□□□□ -1.22
HDAC7-221ENST00000477203 KRTAP16-1A8MUX0 517 aa7.45□□□□□ -1.22
HDAC7-221ENST00000477203 UQCR11O14957 56 aa7.42□□□□□ -1.22
HDAC7-221ENST00000477203 KRTAP13-3Q3SY46 172 aa7.42□□□□□ -1.22
HDAC7-221ENST00000477203 Q8N1X5 172 aa7.42□□□□□ -1.22
HDAC7-221ENST00000477203 SPATA8Q6RVD6 105 aa7.41□□□□□ -1.22
HDAC7-221ENST00000477203 RYR1P21817 5038 aa7.39□□□□□ -1.23
HDAC7-221ENST00000477203 FAT3Q8TDW7 4589 aa7.36□□□□□ -1.23
HDAC7-221ENST00000477203 CRIPTQ9P021 101 aa7.36□□□□□ -1.23
HDAC7-221ENST00000477203 TNXBP22105 4242 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms