RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 CDK2AP2O75956 126 aa12.39□□□□□ -0.43
LIMS2-214ENST00000476932 MRPL34Q9BQ48 92 aaKnown RBP12.39□□□□□ -0.43
LIMS2-214ENST00000476932 KRTAP10-2P60368 255 aa12.37□□□□□ -0.43
LIMS2-214ENST00000476932 IGLV7-46A0A075B6I9 117 aa12.36□□□□□ -0.43
LIMS2-214ENST00000476932 CD164Q04900 197 aa12.36□□□□□ -0.43
LIMS2-214ENST00000476932 NDUFS5O43920 106 aa12.35□□□□□ -0.43
LIMS2-214ENST00000476932 CIRBP-AS1Q8TBR5 109 aa12.35□□□□□ -0.43
LIMS2-214ENST00000476932 PCOTHQ58A44 107 aa12.35□□□□□ -0.43
LIMS2-214ENST00000476932 PSPHP1O15172 72 aa12.32□□□□□ -0.44
LIMS2-214ENST00000476932 PKD1P98161 4303 aa12.32□□□□□ -0.44
LIMS2-214ENST00000476932 SPINK6Q6UWN8 80 aa12.31□□□□□ -0.44
LIMS2-214ENST00000476932 SSBP3-AS1Q7Z2R9 100 aa12.27□□□□□ -0.44
LIMS2-214ENST00000476932 COA5Q86WW8 74 aa12.27□□□□□ -0.44
LIMS2-214ENST00000476932 FAT2Q9NYQ8 4349 aa12.27□□□□□ -0.45
LIMS2-214ENST00000476932 Q8N9P0 234 aaPredicted RBP12.26□□□□□ -0.45
LIMS2-214ENST00000476932 V9GYY9 64 aa12.26□□□□□ -0.45
LIMS2-214ENST00000476932 A8MUN3 132 aa12.26□□□□□ -0.45
LIMS2-214ENST00000476932 LRP1BQ9NZR2 4599 aa12.25□□□□□ -0.45
LIMS2-214ENST00000476932 KRTAP13-3Q3SY46 172 aa12.25□□□□□ -0.45
LIMS2-214ENST00000476932 Q6ZSA8 131 aa12.24□□□□□ -0.45
LIMS2-214ENST00000476932 HYDINQ4G0P3 5121 aa12.24□□□□□ -0.45
LIMS2-214ENST00000476932 KRTAP21-3Q3LHN1 58 aa12.22□□□□□ -0.45
LIMS2-214ENST00000476932 Q5W150 140 aa12.22□□□□□ -0.45
LIMS2-214ENST00000476932 KRTAP10-1P60331 282 aa12.21□□□□□ -0.45
LIMS2-214ENST00000476932 KRTAP13-2Q52LG2 175 aa12.21□□□□□ -0.46
LIMS2-214ENST00000476932 Q5VV11 94 aa12.21□□□□□ -0.46
LIMS2-214ENST00000476932 C1orf195Q5TG92 126 aa12.2□□□□□ -0.46
LIMS2-214ENST00000476932 LIMD2Q9BT23 127 aa12.16□□□□□ -0.46
LIMS2-214ENST00000476932 C8orf87E5RJ46 101 aa12.16□□□□□ -0.46
LIMS2-214ENST00000476932 LOC101927531A0A1B0GV80 90 aa12.15□□□□□ -0.46
LIMS2-214ENST00000476932 HRES1P13985 223 aa12.12□□□□□ -0.47
LIMS2-214ENST00000476932 VPS13BQ7Z7G8 4022 aa12.1□□□□□ -0.47
LIMS2-214ENST00000476932 PRR15LQ9BU68 103 aa12.1□□□□□ -0.47
LIMS2-214ENST00000476932 KRTAP1-4P0C5Y4 121 aa12.09□□□□□ -0.47
LIMS2-214ENST00000476932 LINC00313P59037 77 aa12.06□□□□□ -0.48
LIMS2-214ENST00000476932 A8MU10 97 aa12.04□□□□□ -0.48
LIMS2-214ENST00000476932 CHKB-CPT1BH3BT56 60 aa12.02□□□□□ -0.49
LIMS2-214ENST00000476932 Q75L30 129 aa12.02□□□□□ -0.49
LIMS2-214ENST00000476932 KRTAP16-1A8MUX0 517 aa12□□□□□ -0.49
LIMS2-214ENST00000476932 SPAG11AQ6PDA7 123 aa11.99□□□□□ -0.49
LIMS2-214ENST00000476932 LINC01558Q9Y6Z2 57 aa11.99□□□□□ -0.49
LIMS2-214ENST00000476932 FAM229AH3BQW9 127 aa11.97□□□□□ -0.49
LIMS2-214ENST00000476932 RETNLBQ9BQ08 111 aa11.94□□□□□ -0.5
LIMS2-214ENST00000476932 PKHD1P08F94 4074 aa11.93□□□□□ -0.5
LIMS2-214ENST00000476932 IGKV2-30P06310 120 aa11.91□□□□□ -0.5
LIMS2-214ENST00000476932 PRR26Q8N8Z3 221 aa11.89□□□□□ -0.51
LIMS2-214ENST00000476932 DMAC1Q96GE9 116 aa11.89□□□□□ -0.51
LIMS2-214ENST00000476932 PLA2G1BP04054 148 aaKnown RBP11.88□□□□□ -0.51
LIMS2-214ENST00000476932 LCA10Q71F78 164 aa11.88□□□□□ -0.51
LIMS2-214ENST00000476932 SACSQ9NZJ4 4579 aa11.87□□□□□ -0.51
LIMS2-214ENST00000476932 ACYP2P14621 99 aa11.86□□□□□ -0.51
LIMS2-214ENST00000476932 A6NED7 52 aa11.85□□□□□ -0.51
LIMS2-214ENST00000476932 TYMSOSQ8TAI1 123 aa11.85□□□□□ -0.51
LIMS2-214ENST00000476932 SPINK1P00995 79 aa11.81□□□□□ -0.52
LIMS2-214ENST00000476932 C4orf48Q5BLP8 95 aa11.8□□□□□ -0.52
LIMS2-214ENST00000476932 SPINK7P58062 85 aa11.76□□□□□ -0.53
LIMS2-214ENST00000476932 CDC42SE1Q9NRR8 79 aa11.76□□□□□ -0.53
LIMS2-214ENST00000476932 DYNC1H1Q14204 4646 aaKnown RBP11.76□□□□□ -0.53
LIMS2-214ENST00000476932 IGKV2D-30A0A075B6S6 120 aa11.72□□□□□ -0.53
LIMS2-214ENST00000476932 PMAIP1Q13794 54 aa11.71□□□□□ -0.54
LIMS2-214ENST00000476932 ATP11AUNQ6ZP68 121 aa11.7□□□□□ -0.54
LIMS2-214ENST00000476932 LINC00304Q8N9R0 145 aa11.7□□□□□ -0.54
LIMS2-214ENST00000476932 RPS29P62273 56 aaKnown RBP11.69□□□□□ -0.54
LIMS2-214ENST00000476932 SPTSSBQ8NFR3 76 aa11.69□□□□□ -0.54
LIMS2-214ENST00000476932 PKHD1L1Q86WI1 4243 aa11.67□□□□□ -0.54
LIMS2-214ENST00000476932 APOBP04114 4563 aaKnown RBP11.64□□□□□ -0.55
LIMS2-214ENST00000476932 SMR3BP02814 79 aaPredicted RBP11.63□□□□□ -0.55
LIMS2-214ENST00000476932 FAT1Q14517 4588 aa11.61□□□□□ -0.55
LIMS2-214ENST00000476932 A0A1B0GVY2 172 aa11.6□□□□□ -0.55
LIMS2-214ENST00000476932 KRTAP10-4P60372 401 aaPredicted RBP11.6□□□□□ -0.55
LIMS2-214ENST00000476932 A6NN06 94 aa11.59□□□□□ -0.55
LIMS2-214ENST00000476932 C7orf65Q6ZTY9 151 aa11.57□□□□□ -0.56
LIMS2-214ENST00000476932 A0A1B0GU69 56 aa11.53□□□□□ -0.56
LIMS2-214ENST00000476932 KTN1-AS1Q86SY8 53 aa11.48□□□□□ -0.57
LIMS2-214ENST00000476932 RYR2Q92736 4967 aa11.47□□□□□ -0.57
LIMS2-214ENST00000476932 C9orf92A6NGG3 77 aa11.46□□□□□ -0.58
LIMS2-214ENST00000476932 Q8N1X5 172 aa11.46□□□□□ -0.58
LIMS2-214ENST00000476932 C20orf166-AS1Q96NR2 134 aa11.46□□□□□ -0.58
LIMS2-214ENST00000476932 A8MUU9 505 aa11.45□□□□□ -0.58
LIMS2-214ENST00000476932 SPATA8Q6RVD6 105 aa11.37□□□□□ -0.59
LIMS2-214ENST00000476932 KMT2CQ8NEZ4 4911 aaKnown RBP11.35□□□□□ -0.59
LIMS2-214ENST00000476932 FLG2Q5D862 2391 aaPredicted RBP11.32□□□□□ -0.6
LIMS2-214ENST00000476932 UQCR11O14957 56 aa11.31□□□□□ -0.6
LIMS2-214ENST00000476932 SEC61GP60059 68 aa11.3□□□□□ -0.6
LIMS2-214ENST00000476932 MIR22HGQ0VDD5 57 aa11.29□□□□□ -0.6
LIMS2-214ENST00000476932 KRTAP3-1Q9BYR8 98 aa11.29□□□□□ -0.6
LIMS2-214ENST00000476932 TNXBP22105 4242 aa11.24□□□□□ -0.61
LIMS2-214ENST00000476932 FAT3Q8TDW7 4589 aa11.22□□□□□ -0.61
LIMS2-214ENST00000476932 LRP1Q07954 4544 aaKnown RBP11.19□□□□□ -0.62
LIMS2-214ENST00000476932 RBM12B-AS1Q9P1G2 102 aa11.16□□□□□ -0.62
LIMS2-214ENST00000476932 HSPG2P98160 4391 aa11.14□□□□□ -0.63
LIMS2-214ENST00000476932 KRTAP10-8P60410 259 aa11.1□□□□□ -0.63
LIMS2-214ENST00000476932 COX6B2Q6YFQ2 88 aa11.06□□□□□ -0.64
LIMS2-214ENST00000476932 ADM2Q7Z4H4 148 aa11.04□□□□□ -0.64
LIMS2-214ENST00000476932 H0YAA0 97 aa11.02□□□□□ -0.64
LIMS2-214ENST00000476932 Q5VSD8 79 aa11.02□□□□□ -0.64
LIMS2-214ENST00000476932 PRAC1Q96KF2 57 aa11.02□□□□□ -0.64
LIMS2-214ENST00000476932 RYR3Q15413 4870 aa11.02□□□□□ -0.65
LIMS2-214ENST00000476932 RYR1P21817 5038 aa10.97□□□□□ -0.65
LIMS2-214ENST00000476932 KRTAP17-1Q9BYP8 105 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms