RNA–Protein interactions for RNA: ENST00000476806.5

RBM39-230, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-230ENST00000476806 A0A087WSZ3 146 aa4.7□□□□□ -1.66
RBM39-230ENST00000476806 FAM236AA0A1B0GUQ0 79 aa4.7□□□□□ -1.66
RBM39-230ENST00000476806 FAM236BA0A1B0GV22 79 aa4.7□□□□□ -1.66
RBM39-230ENST00000476806 CDK2AP2O75956 126 aa4.7□□□□□ -1.66
RBM39-230ENST00000476806 MOBPQ13875 183 aa4.7□□□□□ -1.66
RBM39-230ENST00000476806 SPAG11AQ6PDA7 123 aa4.7□□□□□ -1.66
RBM39-230ENST00000476806 ANAPC13Q9BS18 74 aa4.7□□□□□ -1.66
RBM39-230ENST00000476806 IGKV3D-7A0A0C4DH55 119 aa4.69□□□□□ -1.66
RBM39-230ENST00000476806 PCP4P48539 62 aa4.69□□□□□ -1.66
RBM39-230ENST00000476806 RPS29P62273 56 aaKnown RBP4.69□□□□□ -1.66
RBM39-230ENST00000476806 FAT1Q14517 4588 aa4.69□□□□□ -1.66
RBM39-230ENST00000476806 ASB16-AS1Q495Z4 193 aa4.68□□□□□ -1.66
RBM39-230ENST00000476806 Q5XG85 94 aa4.68□□□□□ -1.66
RBM39-230ENST00000476806 KRTAP29-1A8MX34 341 aaPredicted RBP4.67□□□□□ -1.66
RBM39-230ENST00000476806 HMCN2Q8NDA2 5059 aa4.67□□□□□ -1.66
RBM39-230ENST00000476806 SPINK1P00995 79 aa4.66□□□□□ -1.66
RBM39-230ENST00000476806 A8MWP4 228 aa4.65□□□□□ -1.67
RBM39-230ENST00000476806 TYMSOSQ8TAI1 123 aa4.65□□□□□ -1.67
RBM39-230ENST00000476806 UQCRQO14949 82 aa4.64□□□□□ -1.67
RBM39-230ENST00000476806 SERP2Q8N6R1 65 aa4.63□□□□□ -1.67
RBM39-230ENST00000476806 HCG22E2RYF7 251 aa4.62□□□□□ -1.67
RBM39-230ENST00000476806 IGKV4-1P06312 121 aa4.62□□□□□ -1.67
RBM39-230ENST00000476806 PRR15Q8IV56 129 aa4.62□□□□□ -1.67
RBM39-230ENST00000476806 LINC00472Q9H8W2 130 aa4.62□□□□□ -1.67
RBM39-230ENST00000476806 TRAV7A0A075B6U4 112 aa4.61□□□□□ -1.67
RBM39-230ENST00000476806 C8orf87E5RJ46 101 aa4.61□□□□□ -1.67
RBM39-230ENST00000476806 KRTAP1-4P0C5Y4 121 aa4.6□□□□□ -1.67
RBM39-230ENST00000476806 COX7CP15954 63 aa4.6□□□□□ -1.67
RBM39-230ENST00000476806 A0A087WVE0 104 aa4.59□□□□□ -1.67
RBM39-230ENST00000476806 NDUFC1O43677 76 aa4.59□□□□□ -1.67
RBM39-230ENST00000476806 LINC00304Q8N9R0 145 aa4.59□□□□□ -1.67
RBM39-230ENST00000476806 TP53AIP1Q9HCN2 124 aa4.59□□□□□ -1.67
RBM39-230ENST00000476806 K7EQZ3 153 aa4.58□□□□□ -1.68
RBM39-230ENST00000476806 DSCR10P59022 87 aa4.58□□□□□ -1.68
RBM39-230ENST00000476806 KRTAP5-11Q6L8G4 156 aa4.58□□□□□ -1.68
RBM39-230ENST00000476806 SRRM2Q9UQ35 2752 aaKnown RBP4.57□□□□□ -1.68
RBM39-230ENST00000476806 VPS13BQ7Z7G8 4022 aa4.57□□□□□ -1.68
RBM39-230ENST00000476806 A0A1B0GVX0 72 aa4.57□□□□□ -1.68
RBM39-230ENST00000476806 H3BPC8 53 aa4.57□□□□□ -1.68
RBM39-230ENST00000476806 HRCT1Q6UXD1 115 aa4.57□□□□□ -1.68
RBM39-230ENST00000476806 CASC2Q6XLA1 102 aa4.57□□□□□ -1.68
RBM39-230ENST00000476806 DMBT1Q9UGM3 2413 aaPredicted RBP4.56□□□□□ -1.68
RBM39-230ENST00000476806 A0A087X002 238 aa4.56□□□□□ -1.68
RBM39-230ENST00000476806 hDV103S1A0JD37 113 aa4.56□□□□□ -1.68
RBM39-230ENST00000476806 SMR3BP02814 79 aaPredicted RBP4.56□□□□□ -1.68
RBM39-230ENST00000476806 KRTAP13-2Q52LG2 175 aa4.56□□□□□ -1.68
RBM39-230ENST00000476806 C5orf47Q569G3 176 aa4.56□□□□□ -1.68
RBM39-230ENST00000476806 Q5VSD8 79 aa4.56□□□□□ -1.68
RBM39-230ENST00000476806 ANAPC11Q9NYG5 84 aa4.56□□□□□ -1.68
RBM39-230ENST00000476806 RNF213Q63HN8 5207 aa4.55□□□□□ -1.68
RBM39-230ENST00000476806 MP68P56378 58 aa4.55□□□□□ -1.68
RBM39-230ENST00000476806 TMEM254Q8TBM7 123 aa4.54□□□□□ -1.68
RBM39-230ENST00000476806 Q96NJ1 140 aa4.54□□□□□ -1.68
RBM39-230ENST00000476806 KRTAP10-7P60409 375 aaPredicted RBP4.53□□□□□ -1.68
RBM39-230ENST00000476806 Q8N9L7 120 aa4.53□□□□□ -1.68
RBM39-230ENST00000476806 C8orf17Q9NRJ1 99 aa4.53□□□□□ -1.68
RBM39-230ENST00000476806 DNAH8Q96JB1 4490 aa4.52□□□□□ -1.69
RBM39-230ENST00000476806 A0A0G2JQZ4 141 aa4.52□□□□□ -1.69
RBM39-230ENST00000476806 ATP5EP56381 51 aaPredicted RBP4.52□□□□□ -1.69
RBM39-230ENST00000476806 KRTAP10-4P60372 401 aaPredicted RBP4.52□□□□□ -1.69
RBM39-230ENST00000476806 KLKP1Q107X0 134 aa4.52□□□□□ -1.69
RBM39-230ENST00000476806 IGHV6-1A0A0B4J1U7 121 aa4.51□□□□□ -1.69
RBM39-230ENST00000476806 PRR26Q8N8Z3 221 aa4.51□□□□□ -1.69
RBM39-230ENST00000476806 MRPL34Q9BQ48 92 aaKnown RBP4.51□□□□□ -1.69
RBM39-230ENST00000476806 OCR1Q9BZK8 76 aa4.51□□□□□ -1.69
RBM39-230ENST00000476806 MMP24-AS1A0A0U1RRL7 71 aa4.5□□□□□ -1.69
RBM39-230ENST00000476806 OXTP01178 125 aa4.5□□□□□ -1.69
RBM39-230ENST00000476806 LINC00313P59037 77 aa4.5□□□□□ -1.69
RBM39-230ENST00000476806 TMEM258P61165 79 aa4.5□□□□□ -1.69
RBM39-230ENST00000476806 DEFB116Q30KQ4 102 aa4.5□□□□□ -1.69
RBM39-230ENST00000476806 FP248Q71RG6 208 aaPredicted RBP4.5□□□□□ -1.69
RBM39-230ENST00000476806 TRAV22A0A0B4J277 110 aa4.49□□□□□ -1.69
RBM39-230ENST00000476806 C1orf195Q5TG92 126 aa4.49□□□□□ -1.69
RBM39-230ENST00000476806 WFDC13Q8IUB5 93 aa4.49□□□□□ -1.69
RBM39-230ENST00000476806 C20orf197Q8N268 126 aa4.48□□□□□ -1.69
RBM39-230ENST00000476806 NDUFS5O43920 106 aa4.47□□□□□ -1.69
RBM39-230ENST00000476806 LRP1Q07954 4544 aaKnown RBP4.47□□□□□ -1.69
RBM39-230ENST00000476806 FAT3Q8TDW7 4589 aa4.45□□□□□ -1.7
RBM39-230ENST00000476806 CCDC179H3BU77 68 aa4.45□□□□□ -1.7
RBM39-230ENST00000476806 LOC101927531A0A1B0GV80 90 aa4.44□□□□□ -1.7
RBM39-230ENST00000476806 A0A0U1RQV1 116 aa4.43□□□□□ -1.7
RBM39-230ENST00000476806 H0Y9P7 68 aa4.43□□□□□ -1.7
RBM39-230ENST00000476806 Q8N9P0 234 aaPredicted RBP4.43□□□□□ -1.7
RBM39-230ENST00000476806 KRTAP10-8P60410 259 aa4.42□□□□□ -1.7
RBM39-230ENST00000476806 LRP2P98164 4655 aa4.42□□□□□ -1.7
RBM39-230ENST00000476806 FLG2Q5D862 2391 aaPredicted RBP4.41□□□□□ -1.7
RBM39-230ENST00000476806 SPANXA2-OT1Q8N9U9 137 aa4.4□□□□□ -1.71
RBM39-230ENST00000476806 C1orf64Q8NEQ6 169 aa4.4□□□□□ -1.71
RBM39-230ENST00000476806 FAM236DA0A1B0GTK5 79 aa4.39□□□□□ -1.71
RBM39-230ENST00000476806 FAM236CP0DP71 79 aa4.39□□□□□ -1.71
RBM39-230ENST00000476806 LINC00208Q96KT6 92 aa4.39□□□□□ -1.71
RBM39-230ENST00000476806 H7BZZ5 65 aa4.38□□□□□ -1.71
RBM39-230ENST00000476806 KRTAP10-6P60371 365 aaPredicted RBP4.38□□□□□ -1.71
RBM39-230ENST00000476806 LCE1AQ5T7P2 110 aa4.37□□□□□ -1.71
RBM39-230ENST00000476806 SNURFQ9Y675 71 aa4.37□□□□□ -1.71
RBM39-230ENST00000476806 RPS28P62857 69 aaKnown RBP4.36□□□□□ -1.71
RBM39-230ENST00000476806 ZCCHC13Q8WW36 166 aaKnown RBP4.36□□□□□ -1.71
RBM39-230ENST00000476806 C20orf166-AS1Q96NR2 134 aa4.36□□□□□ -1.71
RBM39-230ENST00000476806 Q75L30 129 aa4.35□□□□□ -1.71
RBM39-230ENST00000476806 PKHD1L1Q86WI1 4243 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms