RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 LINC00313P59037 77 aa5.4□□□□□ -1.54
CCM2-208ENST00000476594 C20orf166-AS1Q96NR2 134 aa5.4□□□□□ -1.54
CCM2-208ENST00000476594 C9JAW5 83 aa5.39□□□□□ -1.55
CCM2-208ENST00000476594 JMJD7-PLA2G4BH0Y9G9 81 aa5.39□□□□□ -1.55
CCM2-208ENST00000476594 BAALC-AS2P0C853 105 aa5.39□□□□□ -1.55
CCM2-208ENST00000476594 TRBV20-1A0A075B6N2 111 aa5.37□□□□□ -1.55
CCM2-208ENST00000476594 A8MUU9 505 aa5.37□□□□□ -1.55
CCM2-208ENST00000476594 J3KT08 172 aa5.37□□□□□ -1.55
CCM2-208ENST00000476594 DSCR10P59022 87 aa5.37□□□□□ -1.55
CCM2-208ENST00000476594 A0A1B0GW54 56 aa5.36□□□□□ -1.55
CCM2-208ENST00000476594 KRTAP9-7A8MTY7 169 aa5.36□□□□□ -1.55
CCM2-208ENST00000476594 M0R2T5 61 aa5.36□□□□□ -1.55
CCM2-208ENST00000476594 PDE6GP18545 87 aa5.36□□□□□ -1.55
CCM2-208ENST00000476594 C8orf87E5RJ46 101 aa5.35□□□□□ -1.55
CCM2-208ENST00000476594 MT1HP80294 61 aa5.35□□□□□ -1.55
CCM2-208ENST00000476594 LINC00472Q9H8W2 130 aa5.35□□□□□ -1.55
CCM2-208ENST00000476594 IGHV6-1A0A0B4J1U7 121 aa5.34□□□□□ -1.55
CCM2-208ENST00000476594 NDUFB1O75438 58 aa5.34□□□□□ -1.55
CCM2-208ENST00000476594 KRTAP19-2Q3LHN2 52 aa5.34□□□□□ -1.55
CCM2-208ENST00000476594 KRTAP4-9Q9BYQ8 210 aa5.34□□□□□ -1.55
CCM2-208ENST00000476594 BATFQ16520 125 aa5.33□□□□□ -1.56
CCM2-208ENST00000476594 DEFB116Q30KQ4 102 aa5.33□□□□□ -1.56
CCM2-208ENST00000476594 A0A1B0GVX0 72 aa5.32□□□□□ -1.56
CCM2-208ENST00000476594 NAA38Q9BRA0 125 aaKnown RBP5.32□□□□□ -1.56
CCM2-208ENST00000476594 LOC110117498A0A087WWA1 95 aa5.31□□□□□ -1.56
CCM2-208ENST00000476594 Q6ZQT0 140 aa5.31□□□□□ -1.56
CCM2-208ENST00000476594 KRTAP16-1A8MUX0 517 aa5.28□□□□□ -1.56
CCM2-208ENST00000476594 C14orf132Q9NPU4 83 aa5.27□□□□□ -1.57
CCM2-208ENST00000476594 RBM12B-AS1Q9P1G2 102 aa5.27□□□□□ -1.57
CCM2-208ENST00000476594 FLGP20930 4061 aaPredicted RBP5.26□□□□□ -1.57
CCM2-208ENST00000476594 FAM236DA0A1B0GTK5 79 aa5.26□□□□□ -1.57
CCM2-208ENST00000476594 C9orf118A6NHY6 69 aa5.26□□□□□ -1.57
CCM2-208ENST00000476594 H3BT86 120 aa5.26□□□□□ -1.57
CCM2-208ENST00000476594 FAM236CP0DP71 79 aa5.26□□□□□ -1.57
CCM2-208ENST00000476594 A8MWP4 228 aa5.25□□□□□ -1.57
CCM2-208ENST00000476594 KRTAP10-6P60371 365 aaPredicted RBP5.25□□□□□ -1.57
CCM2-208ENST00000476594 NREPQ16612 68 aa5.25□□□□□ -1.57
CCM2-208ENST00000476594 LCE4AQ5TA78 99 aa5.25□□□□□ -1.57
CCM2-208ENST00000476594 NOTCH2NLQ7Z3S9 236 aa5.25□□□□□ -1.57
CCM2-208ENST00000476594 A0A1W2PPM0 123 aa5.24□□□□□ -1.57
CCM2-208ENST00000476594 MTURNQ8N3F0 131 aa5.24□□□□□ -1.57
CCM2-208ENST00000476594 LOC105371267A0A1B0GV96 52 aa5.23□□□□□ -1.57
CCM2-208ENST00000476594 KRTAP4-2Q9BYR5 136 aa5.23□□□□□ -1.57
CCM2-208ENST00000476594 ZCCHC13Q8WW36 166 aaKnown RBP5.22□□□□□ -1.57
CCM2-208ENST00000476594 TAX1BP3O14907 124 aa5.21□□□□□ -1.58
CCM2-208ENST00000476594 C8orf17Q9NRJ1 99 aa5.21□□□□□ -1.58
CCM2-208ENST00000476594 Q8N9P0 234 aaPredicted RBP5.2□□□□□ -1.58
CCM2-208ENST00000476594 KRTAP19-4Q3LI73 84 aa5.19□□□□□ -1.58
CCM2-208ENST00000476594 PRR15Q8IV56 129 aa5.19□□□□□ -1.58
CCM2-208ENST00000476594 IGKV3D-7A0A0C4DH55 119 aa5.18□□□□□ -1.58
CCM2-208ENST00000476594 Q6ZVQ6 151 aa5.18□□□□□ -1.58
CCM2-208ENST00000476594 SPCS1Q9Y6A9 102 aa5.18□□□□□ -1.58
CCM2-208ENST00000476594 COL5A1-AS1Q5SY13 56 aa5.17□□□□□ -1.58
CCM2-208ENST00000476594 BPY2O14599 106 aa5.16□□□□□ -1.58
CCM2-208ENST00000476594 HRES1P13985 223 aa5.16□□□□□ -1.58
CCM2-208ENST00000476594 TMEM254Q8TBM7 123 aa5.16□□□□□ -1.58
CCM2-208ENST00000476594 SPINK7P58062 85 aa5.15□□□□□ -1.59
CCM2-208ENST00000476594 MRPL34Q9BQ48 92 aaKnown RBP5.15□□□□□ -1.59
CCM2-208ENST00000476594 hDV103S1A0JD37 113 aa5.14□□□□□ -1.59
CCM2-208ENST00000476594 MPLKIPQ8TAP9 179 aa5.14□□□□□ -1.59
CCM2-208ENST00000476594 KRTAP4-11Q9BYQ6 195 aa5.14□□□□□ -1.59
CCM2-208ENST00000476594 NDUFS5O43920 106 aa5.13□□□□□ -1.59
CCM2-208ENST00000476594 MMP24-AS1A0A0U1RRL7 71 aa5.12□□□□□ -1.59
CCM2-208ENST00000476594 K7EQZ3 153 aa5.12□□□□□ -1.59
CCM2-208ENST00000476594 UBL5Q9BZL1 73 aa5.11□□□□□ -1.59
CCM2-208ENST00000476594 K7EP34 96 aa5.09□□□□□ -1.59
CCM2-208ENST00000476594 GTF2H5Q6ZYL4 71 aa5.09□□□□□ -1.59
CCM2-208ENST00000476594 WFDC13Q8IUB5 93 aa5.09□□□□□ -1.59
CCM2-208ENST00000476594 CASC2Q6XLA1 102 aa5.07□□□□□ -1.6
CCM2-208ENST00000476594 C7orf65Q6ZTY9 151 aa5.05□□□□□ -1.6
CCM2-208ENST00000476594 LCE5AQ5TCM9 118 aa5.04□□□□□ -1.6
CCM2-208ENST00000476594 F8W1H4 67 aa5.03□□□□□ -1.6
CCM2-208ENST00000476594 CXCL6P80162 114 aa5.03□□□□□ -1.6
CCM2-208ENST00000476594 KRTAP9-8Q9BYQ0 159 aa5.03□□□□□ -1.6
CCM2-208ENST00000476594 PRO0461Q9UI25 63 aa5.03□□□□□ -1.6
CCM2-208ENST00000476594 IGKV2D-30A0A075B6S6 120 aa5.02□□□□□ -1.61
CCM2-208ENST00000476594 HCG22E2RYF7 251 aa5.02□□□□□ -1.61
CCM2-208ENST00000476594 IGKV2-30P06310 120 aa5.02□□□□□ -1.61
CCM2-208ENST00000476594 Q8N9L7 120 aa5.02□□□□□ -1.61
CCM2-208ENST00000476594 LINC00846Q9NV44 126 aa5.02□□□□□ -1.61
CCM2-208ENST00000476594 PCP4L1A6NKN8 68 aa5□□□□□ -1.61
CCM2-208ENST00000476594 H3BS24 57 aa4.99□□□□□ -1.61
CCM2-208ENST00000476594 KRTAP10-10P60014 251 aa4.99□□□□□ -1.61
CCM2-208ENST00000476594 MT2AP02795 61 aa4.98□□□□□ -1.61
CCM2-208ENST00000476594 H1FX-AS1Q4G0G2 97 aa4.98□□□□□ -1.61
CCM2-208ENST00000476594 SYNE2Q8WXH0 6885 aaKnown RBP4.96□□□□□ -1.62
CCM2-208ENST00000476594 ETDBQ3ZM63 59 aa4.96□□□□□ -1.62
CCM2-208ENST00000476594 TP53AIP1Q9HCN2 124 aa4.96□□□□□ -1.62
CCM2-208ENST00000476594 Q5W150 140 aa4.95□□□□□ -1.62
CCM2-208ENST00000476594 KRTAP9-3Q9BYQ3 159 aa4.94□□□□□ -1.62
CCM2-208ENST00000476594 MT1FP04733 61 aa4.93□□□□□ -1.62
CCM2-208ENST00000476594 ACYP1P07311 99 aa4.93□□□□□ -1.62
CCM2-208ENST00000476594 C4orf26Q17RF5 130 aa4.89□□□□□ -1.63
CCM2-208ENST00000476594 ATP5EP2Q5VTU8 51 aa4.89□□□□□ -1.63
CCM2-208ENST00000476594 USH2AO75445 5202 aa4.88□□□□□ -1.63
CCM2-208ENST00000476594 FAM240AA0A1B0GVK7 77 aa4.88□□□□□ -1.63
CCM2-208ENST00000476594 C1orf64Q8NEQ6 169 aa4.84□□□□□ -1.63
CCM2-208ENST00000476594 S4R3F8 94 aa4.84□□□□□ -1.63
CCM2-208ENST00000476594 SSPOA2VEC9 5147 aa4.83□□□□□ -1.64
CCM2-208ENST00000476594 TRAV22A0A0B4J277 110 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms