RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 LINC00472Q9H8W2 130 aa8.22□□□□□ -1.09
SNX13-207ENST00000475800 IGKV4-1P06312 121 aa8.21□□□□□ -1.1
SNX13-207ENST00000475800 J3KT08 172 aa8.18□□□□□ -1.1
SNX13-207ENST00000475800 RPL37P61927 97 aaKnown RBP8.17□□□□□ -1.1
SNX13-207ENST00000475800 SMCPP49901 116 aaPredicted RBP8.16□□□□□ -1.1
SNX13-207ENST00000475800 PRO0461Q9UI25 63 aa8.16□□□□□ -1.1
SNX13-207ENST00000475800 DEFB116Q30KQ4 102 aa8.15□□□□□ -1.1
SNX13-207ENST00000475800 LINC00313P59037 77 aa8.13□□□□□ -1.11
SNX13-207ENST00000475800 PCOTHQ58A44 107 aa8.13□□□□□ -1.11
SNX13-207ENST00000475800 Q75L30 129 aa8.13□□□□□ -1.11
SNX13-207ENST00000475800 KRTAP9-6A0A140TA67 174 aa8.12□□□□□ -1.11
SNX13-207ENST00000475800 F8W1H4 67 aa8.12□□□□□ -1.11
SNX13-207ENST00000475800 NREPQ16612 68 aa8.12□□□□□ -1.11
SNX13-207ENST00000475800 A0A1B0GVX0 72 aa8.1□□□□□ -1.11
SNX13-207ENST00000475800 C8orf87E5RJ46 101 aa8.1□□□□□ -1.11
SNX13-207ENST00000475800 NDUFB1O75438 58 aa8.1□□□□□ -1.11
SNX13-207ENST00000475800 DSCR10P59022 87 aa8.1□□□□□ -1.11
SNX13-207ENST00000475800 IGHV6-1A0A0B4J1U7 121 aa8.09□□□□□ -1.11
SNX13-207ENST00000475800 C20orf166-AS1Q96NR2 134 aa8.09□□□□□ -1.11
SNX13-207ENST00000475800 KRTAP4-1Q9BYQ7 146 aa8.09□□□□□ -1.11
SNX13-207ENST00000475800 A8MUU9 505 aa8.07□□□□□ -1.12
SNX13-207ENST00000475800 ATP11AUNQ6ZP68 121 aa8.07□□□□□ -1.12
SNX13-207ENST00000475800 A8MWP4 228 aa8.06□□□□□ -1.12
SNX13-207ENST00000475800 PCP4P48539 62 aa8.05□□□□□ -1.12
SNX13-207ENST00000475800 KRTAP16-1A8MUX0 517 aa8.03□□□□□ -1.12
SNX13-207ENST00000475800 LCE2CQ5TA81 110 aa8.02□□□□□ -1.13
SNX13-207ENST00000475800 NOTCH2NLQ7Z3S9 236 aa8.02□□□□□ -1.13
SNX13-207ENST00000475800 ETDBQ3ZM63 59 aa8.01□□□□□ -1.13
SNX13-207ENST00000475800 IGKV3D-7A0A0C4DH55 119 aa7.99□□□□□ -1.13
SNX13-207ENST00000475800 BPY2O14599 106 aa7.99□□□□□ -1.13
SNX13-207ENST00000475800 Q6ZVQ6 151 aa7.99□□□□□ -1.13
SNX13-207ENST00000475800 PRR15Q8IV56 129 aa7.99□□□□□ -1.13
SNX13-207ENST00000475800 UBL5Q9BZL1 73 aa7.99□□□□□ -1.13
SNX13-207ENST00000475800 H3BS24 57 aa7.98□□□□□ -1.13
SNX13-207ENST00000475800 C8orf17Q9NRJ1 99 aa7.98□□□□□ -1.13
SNX13-207ENST00000475800 LINC00846Q9NV44 126 aa7.95□□□□□ -1.14
SNX13-207ENST00000475800 K7EQZ3 153 aa7.92□□□□□ -1.14
SNX13-207ENST00000475800 Q8N9P0 234 aaPredicted RBP7.92□□□□□ -1.14
SNX13-207ENST00000475800 A0A1B0GV90 55 aa7.9□□□□□ -1.14
SNX13-207ENST00000475800 TMEM254Q8TBM7 123 aa7.9□□□□□ -1.14
SNX13-207ENST00000475800 MMP24-AS1A0A0U1RRL7 71 aa7.89□□□□□ -1.15
SNX13-207ENST00000475800 hDV103S1A0JD37 113 aa7.88□□□□□ -1.15
SNX13-207ENST00000475800 ACYP1P07311 99 aa7.88□□□□□ -1.15
SNX13-207ENST00000475800 MRPL34Q9BQ48 92 aaKnown RBP7.87□□□□□ -1.15
SNX13-207ENST00000475800 ZCCHC13Q8WW36 166 aaKnown RBP7.86□□□□□ -1.15
SNX13-207ENST00000475800 FAM240AA0A1B0GVK7 77 aa7.85□□□□□ -1.15
SNX13-207ENST00000475800 FSIP2Q5CZC0 6907 aa7.85□□□□□ -1.15
SNX13-207ENST00000475800 CXCL6P80162 114 aa7.83□□□□□ -1.16
SNX13-207ENST00000475800 Q8N9L7 120 aa7.83□□□□□ -1.16
SNX13-207ENST00000475800 CRCT1Q9UGL9 99 aa7.83□□□□□ -1.16
SNX13-207ENST00000475800 LORP23490 312 aaPredicted RBP7.82□□□□□ -1.16
SNX13-207ENST00000475800 KRTAP19-2Q3LHN2 52 aa7.82□□□□□ -1.16
SNX13-207ENST00000475800 CASC2Q6XLA1 102 aa7.81□□□□□ -1.16
SNX13-207ENST00000475800 COX6B2Q6YFQ2 88 aa7.81□□□□□ -1.16
SNX13-207ENST00000475800 MT1HP80294 61 aa7.8□□□□□ -1.16
SNX13-207ENST00000475800 NDUFS5O43920 106 aa7.79□□□□□ -1.16
SNX13-207ENST00000475800 WFDC13Q8IUB5 93 aa7.79□□□□□ -1.16
SNX13-207ENST00000475800 HCG22E2RYF7 251 aa7.77□□□□□ -1.17
SNX13-207ENST00000475800 ATP5EP2Q5VTU8 51 aa7.76□□□□□ -1.17
SNX13-207ENST00000475800 M0R2T5 61 aa7.73□□□□□ -1.17
SNX13-207ENST00000475800 J3QR89 54 aa7.72□□□□□ -1.17
SNX13-207ENST00000475800 SPINK7P58062 85 aa7.72□□□□□ -1.17
SNX13-207ENST00000475800 RBM12B-AS1Q9P1G2 102 aa7.72□□□□□ -1.17
SNX13-207ENST00000475800 HRES1P13985 223 aa7.7□□□□□ -1.18
SNX13-207ENST00000475800 KRTAP10-6P60371 365 aaPredicted RBP7.68□□□□□ -1.18
SNX13-207ENST00000475800 LINC00643Q86TS7 51 aa7.68□□□□□ -1.18
SNX13-207ENST00000475800 MPLKIPQ8TAP9 179 aa7.68□□□□□ -1.18
SNX13-207ENST00000475800 FAM236DA0A1B0GTK5 79 aa7.67□□□□□ -1.18
SNX13-207ENST00000475800 FAM236CP0DP71 79 aa7.67□□□□□ -1.18
SNX13-207ENST00000475800 TP53AIP1Q9HCN2 124 aa7.65□□□□□ -1.18
SNX13-207ENST00000475800 Q5W150 140 aa7.64□□□□□ -1.19
SNX13-207ENST00000475800 KRTAP4-8Q9BYQ9 185 aa7.64□□□□□ -1.19
SNX13-207ENST00000475800 FLGP20930 4061 aaPredicted RBP7.62□□□□□ -1.19
SNX13-207ENST00000475800 HIST1H4AP62805 103 aaKnown RBP7.62□□□□□ -1.19
SNX13-207ENST00000475800 C7orf65Q6ZTY9 151 aa7.62□□□□□ -1.19
SNX13-207ENST00000475800 IGKV2D-30A0A075B6S6 120 aa7.59□□□□□ -1.19
SNX13-207ENST00000475800 IGKV2-30P06310 120 aa7.59□□□□□ -1.19
SNX13-207ENST00000475800 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.56□□□□□ -1.2
SNX13-207ENST00000475800 K7ERU9 68 aa7.52□□□□□ -1.21
SNX13-207ENST00000475800 A0A0A0MQY5 61 aa7.51□□□□□ -1.21
SNX13-207ENST00000475800 A0A087WVE0 104 aa7.5□□□□□ -1.21
SNX13-207ENST00000475800 TRAV22A0A0B4J277 110 aa7.49□□□□□ -1.21
SNX13-207ENST00000475800 UQCRQO14949 82 aa7.49□□□□□ -1.21
SNX13-207ENST00000475800 SEC61GP60059 68 aa7.46□□□□□ -1.22
SNX13-207ENST00000475800 LOC101927531A0A1B0GV80 90 aa7.44□□□□□ -1.22
SNX13-207ENST00000475800 ATOX1O00244 68 aa7.44□□□□□ -1.22
SNX13-207ENST00000475800 H1FX-AS1Q4G0G2 97 aa7.44□□□□□ -1.22
SNX13-207ENST00000475800 C4orf26Q17RF5 130 aa7.42□□□□□ -1.22
SNX13-207ENST00000475800 IMUPQ9GZP8 106 aa7.42□□□□□ -1.22
SNX13-207ENST00000475800 H0Y9P7 68 aa7.4□□□□□ -1.22
SNX13-207ENST00000475800 CYP4F30PQ9H0H9 118 aa7.4□□□□□ -1.22
SNX13-207ENST00000475800 USH2AO75445 5202 aa7.37□□□□□ -1.23
SNX13-207ENST00000475800 OCR1Q9BZK8 76 aa7.37□□□□□ -1.23
SNX13-207ENST00000475800 SCGB1A1P11684 91 aa7.36□□□□□ -1.23
SNX13-207ENST00000475800 MP68P56378 58 aa7.35□□□□□ -1.23
SNX13-207ENST00000475800 SSPOA2VEC9 5147 aa7.34□□□□□ -1.23
SNX13-207ENST00000475800 MT-ATP8P03928 68 aa7.34□□□□□ -1.23
SNX13-207ENST00000475800 C1orf64Q8NEQ6 169 aa7.34□□□□□ -1.23
SNX13-207ENST00000475800 C5orf47Q569G3 176 aa7.33□□□□□ -1.24
SNX13-207ENST00000475800 KRTAP9-8Q9BYQ0 159 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms