RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 S4R3F8 94 aa1.56□□□□□ -2.16
SDHB-205ENST00000475506 ANKRD17O75179 2603 aaKnown RBP1.56□□□□□ -2.16
SDHB-205ENST00000475506 CSPG4Q6UVK1 2322 aa1.56□□□□□ -2.16
SDHB-205ENST00000475506 CEP290O15078 2479 aa1.55□□□□□ -2.16
SDHB-205ENST00000475506 CHD9Q3L8U1 2897 aa1.55□□□□□ -2.16
SDHB-205ENST00000475506 NBASA2RRP1 2371 aa1.55□□□□□ -2.16
SDHB-205ENST00000475506 SPTBN4Q9H254 2564 aa1.54□□□□□ -2.16
SDHB-205ENST00000475506 DCHS1Q96JQ0 3298 aa1.54□□□□□ -2.16
SDHB-205ENST00000475506 XIRP2A4UGR9 3374 aa1.54□□□□□ -2.16
SDHB-205ENST00000475506 IGF2RP11717 2491 aa1.54□□□□□ -2.16
SDHB-205ENST00000475506 TENM2Q9NT68 2774 aa1.53□□□□□ -2.16
SDHB-205ENST00000475506 AKAP13Q12802 2813 aa1.53□□□□□ -2.16
SDHB-205ENST00000475506 NCOR2Q9Y618 2525 aa1.53□□□□□ -2.16
SDHB-205ENST00000475506 LAMA2P24043 3122 aaKnown RBP1.53□□□□□ -2.17
SDHB-205ENST00000475506 HTTP42858 3142 aa1.53□□□□□ -2.17
SDHB-205ENST00000475506 DSPP15924 2871 aaKnown RBP1.52□□□□□ -2.17
SDHB-205ENST00000475506 MAP1AP78559 2803 aaPredicted RBP1.52□□□□□ -2.17
SDHB-205ENST00000475506 FBN3Q75N90 2809 aa1.52□□□□□ -2.17
SDHB-205ENST00000475506 CHD6Q8TD26 2715 aa1.52□□□□□ -2.17
SDHB-205ENST00000475506 DEFB123Q8N688 67 aa1.52□□□□□ -2.17
SDHB-205ENST00000475506 USP34Q70CQ2 3546 aa1.52□□□□□ -2.17
SDHB-205ENST00000475506 REV3LO60673 3130 aa1.52□□□□□ -2.17
SDHB-205ENST00000475506 ITPR1Q14643 2758 aa1.51□□□□□ -2.17
SDHB-205ENST00000475506 M0QZ58 72 aa1.51□□□□□ -2.17
SDHB-205ENST00000475506 GVINP1Q7Z2Y8 2422 aa1.51□□□□□ -2.17
SDHB-205ENST00000475506 SPTBN5Q9NRC6 3674 aaKnown RBP1.51□□□□□ -2.17
SDHB-205ENST00000475506 LAMA1P25391 3075 aa1.51□□□□□ -2.17
SDHB-205ENST00000475506 DMXL2Q8TDJ6 3036 aa1.5□□□□□ -2.17
SDHB-205ENST00000475506 TACC2O95359 2948 aa1.5□□□□□ -2.17
SDHB-205ENST00000475506 PRRC2CQ9Y520 2896 aaKnown RBP1.49□□□□□ -2.17
SDHB-205ENST00000475506 RPS29P62273 56 aaKnown RBP1.49□□□□□ -2.17
SDHB-205ENST00000475506 FREM2Q5SZK8 3169 aa1.48□□□□□ -2.17
SDHB-205ENST00000475506 WDFY3Q8IZQ1 3526 aa1.47□□□□□ -2.17
SDHB-205ENST00000475506 DMDP11532 3685 aa1.47□□□□□ -2.17
SDHB-205ENST00000475506 CELSR2Q9HCU4 2923 aa1.46□□□□□ -2.17
SDHB-205ENST00000475506 TLN1Q9Y490 2541 aaKnown RBP1.46□□□□□ -2.18
SDHB-205ENST00000475506 LAMA3Q16787 3333 aa1.46□□□□□ -2.18
SDHB-205ENST00000475506 TENM1Q9UKZ4 2725 aa1.46□□□□□ -2.18
SDHB-205ENST00000475506 ZFHX4Q86UP3 3567 aa1.46□□□□□ -2.18
SDHB-205ENST00000475506 ASH1LQ9NR48 2969 aaKnown RBP1.46□□□□□ -2.18
SDHB-205ENST00000475506 BRCA2P51587 3418 aa1.46□□□□□ -2.18
SDHB-205ENST00000475506 BOD1L1Q8NFC6 3051 aa1.46□□□□□ -2.18
SDHB-205ENST00000475506 CSMD1Q96PZ7 3565 aa1.46□□□□□ -2.18
SDHB-205ENST00000475506 TLN2Q9Y4G6 2542 aa1.45□□□□□ -2.18
SDHB-205ENST00000475506 F8P00451 2351 aa1.45□□□□□ -2.18
SDHB-205ENST00000475506 SPEGQ15772 3267 aa1.45□□□□□ -2.18
SDHB-205ENST00000475506 PTPN13Q12923 2485 aa1.45□□□□□ -2.18
SDHB-205ENST00000475506 SONP18583 2426 aaKnown RBP1.45□□□□□ -2.18
SDHB-205ENST00000475506 LRBAP50851 2863 aa1.45□□□□□ -2.18
SDHB-205ENST00000475506 VCANP13611 3396 aa1.44□□□□□ -2.18
SDHB-205ENST00000475506 CELSR3Q9NYQ7 3312 aa1.44□□□□□ -2.18
SDHB-205ENST00000475506 DMXL1Q9Y485 3027 aa1.43□□□□□ -2.18
SDHB-205ENST00000475506 CDH23Q9H251 3354 aa1.43□□□□□ -2.18
SDHB-205ENST00000475506 OTOGQ6ZRI0 2925 aa1.43□□□□□ -2.18
SDHB-205ENST00000475506 HRNRQ86YZ3 2850 aaPredicted RBP1.43□□□□□ -2.18
SDHB-205ENST00000475506 RIF1Q5UIP0 2472 aaKnown RBP1.43□□□□□ -2.18
SDHB-205ENST00000475506 COL12A1Q99715 3063 aa1.43□□□□□ -2.18
SDHB-205ENST00000475506 DOPEY1Q5JWR5 2465 aa1.42□□□□□ -2.18
SDHB-205ENST00000475506 NAV2Q8IVL1 2488 aa1.42□□□□□ -2.18
SDHB-205ENST00000475506 C9orf92A6NGG3 77 aa1.42□□□□□ -2.18
SDHB-205ENST00000475506 APCP25054 2843 aa1.42□□□□□ -2.18
SDHB-205ENST00000475506 CCDC168Q8NDH2 2452 aa1.42□□□□□ -2.18
SDHB-205ENST00000475506 HIVEP3Q5T1R4 2406 aa1.41□□□□□ -2.18
SDHB-205ENST00000475506 DCHS2Q6V1P9 2916 aa1.41□□□□□ -2.18
SDHB-205ENST00000475506 TEX15Q9BXT5 2789 aa1.41□□□□□ -2.18
SDHB-205ENST00000475506 CRCT1Q9UGL9 99 aa1.41□□□□□ -2.18
SDHB-205ENST00000475506 JMJD1CQ15652 2540 aa1.4□□□□□ -2.18
SDHB-205ENST00000475506 SPENQ96T58 3664 aaKnown RBP1.4□□□□□ -2.19
SDHB-205ENST00000475506 ADGRG4Q8IZF6 3080 aa1.4□□□□□ -2.19
SDHB-205ENST00000475506 UBR5O95071 2799 aaPredicted RBP1.4□□□□□ -2.19
SDHB-205ENST00000475506 USP9XQ93008 2570 aaPredicted RBP1.4□□□□□ -2.19
SDHB-205ENST00000475506 ATMQ13315 3056 aa1.4□□□□□ -2.19
SDHB-205ENST00000475506 SETXQ7Z333 2677 aaKnown RBP1.4□□□□□ -2.19
SDHB-205ENST00000475506 CELSR1Q9NYQ6 3014 aa1.4□□□□□ -2.19
SDHB-205ENST00000475506 COL6A5A8TX70 2615 aa1.39□□□□□ -2.19
SDHB-205ENST00000475506 SMG1Q96Q15 3661 aaKnown RBP1.39□□□□□ -2.19
SDHB-205ENST00000475506 Q5VSD8 79 aa1.39□□□□□ -2.19
SDHB-205ENST00000475506 CEP295Q9C0D2 2601 aa1.39□□□□□ -2.19
SDHB-205ENST00000475506 MYO9AB2RTY4 2548 aa1.39□□□□□ -2.19
SDHB-205ENST00000475506 CENPEQ02224 2701 aa1.38□□□□□ -2.19
SDHB-205ENST00000475506 LOC400499M0QZD8 3231 aa1.38□□□□□ -2.19
SDHB-205ENST00000475506 ZFYVE26Q68DK2 2539 aa1.38□□□□□ -2.19
SDHB-205ENST00000475506 UTP20O75691 2785 aaKnown RBP1.37□□□□□ -2.19
SDHB-205ENST00000475506 ZNF462Q96JM2 2506 aa1.37□□□□□ -2.19
SDHB-205ENST00000475506 NF1P21359 2839 aa1.37□□□□□ -2.19
SDHB-205ENST00000475506 AKAP9Q99996 3911 aa1.37□□□□□ -2.19
SDHB-205ENST00000475506 MTORP42345 2549 aa1.37□□□□□ -2.19
SDHB-205ENST00000475506 ANKRD11Q6UB99 2663 aaPredicted RBP1.37□□□□□ -2.19
SDHB-205ENST00000475506 GCN1Q92616 2671 aaKnown RBP1.37□□□□□ -2.19
SDHB-205ENST00000475506 PIEZO1Q92508 2521 aa1.36□□□□□ -2.19
SDHB-205ENST00000475506 TNP1P09430 55 aa1.36□□□□□ -2.19
SDHB-205ENST00000475506 CHD8Q9HCK8 2581 aa1.36□□□□□ -2.19
SDHB-205ENST00000475506 FAM208BQ5VWN6 2430 aa1.36□□□□□ -2.19
SDHB-205ENST00000475506 NBEAL2Q6ZNJ1 2754 aa1.36□□□□□ -2.19
SDHB-205ENST00000475506 UNC79Q9P2D8 2635 aa1.35□□□□□ -2.19
SDHB-205ENST00000475506 PKD1L2Q7Z442 2459 aa1.34□□□□□ -2.2
SDHB-205ENST00000475506 CRYBG3Q68DQ2 2970 aa1.34□□□□□ -2.2
SDHB-205ENST00000475506 TTC28Q96AY4 2481 aa1.33□□□□□ -2.2
SDHB-205ENST00000475506 SRRM2Q9UQ35 2752 aaKnown RBP1.33□□□□□ -2.2
SDHB-205ENST00000475506 MYO15AQ9UKN7 3530 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms