RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 C9orf92A6NGG3 77 aa0.03□□□□□ -2.4
TM9SF3-204ENST00000475401 TENM2Q9NT68 2774 aa0.03□□□□□ -2.41
TM9SF3-204ENST00000475401 SVEP1Q4LDE5 3571 aa0.01□□□□□ -2.41
TM9SF3-204ENST00000475401 TMEM167BQ9NRX6 74 aa0.01□□□□□ -2.41
TM9SF3-204ENST00000475401 H3BUA1 57 aa0□□□□□ -2.41
TM9SF3-204ENST00000475401 FANCD2Q9BXW9 1451 aa0□□□□□ -2.41
TM9SF3-204ENST00000475401 FLGP20930 4061 aaPredicted RBP-0□□□□□ -2.41
TM9SF3-204ENST00000475401 CEP290O15078 2479 aa-0.01□□□□□ -2.41
TM9SF3-204ENST00000475401 DSTQ03001 7570 aaKnown RBP-0.01□□□□□ -2.41
TM9SF3-204ENST00000475401 SPTBN4Q9H254 2564 aa-0.01□□□□□ -2.41
TM9SF3-204ENST00000475401 H0YGX0 51 aa-0.01□□□□□ -2.41
TM9SF3-204ENST00000475401 LINC00308Q8TCZ7 52 aa-0.01□□□□□ -2.41
TM9SF3-204ENST00000475401 STAB1Q9NY15 2570 aa-0.01□□□□□ -2.41
TM9SF3-204ENST00000475401 NRXN3Q9Y4C0 1643 aa-0.02□□□□□ -2.41
TM9SF3-204ENST00000475401 CUBNO60494 3623 aa-0.02□□□□□ -2.41
TM9SF3-204ENST00000475401 SETD2Q9BYW2 2564 aaPredicted RBP-0.02□□□□□ -2.41
TM9SF3-204ENST00000475401 NF1P21359 2839 aa-0.03□□□□□ -2.41
TM9SF3-204ENST00000475401 PKD1L2Q7Z442 2459 aa-0.03□□□□□ -2.41
TM9SF3-204ENST00000475401 SONP18583 2426 aaKnown RBP-0.03□□□□□ -2.41
TM9SF3-204ENST00000475401 MUC12Q9UKN1 5478 aa-0.03□□□□□ -2.41
TM9SF3-204ENST00000475401 FAT1Q14517 4588 aa-0.04□□□□□ -2.42
TM9SF3-204ENST00000475401 HERC1Q15751 4861 aa-0.04□□□□□ -2.42
TM9SF3-204ENST00000475401 ABCA5Q8WWZ7 1642 aa-0.04□□□□□ -2.42
TM9SF3-204ENST00000475401 H3BNG1 76 aa-0.04□□□□□ -2.42
TM9SF3-204ENST00000475401 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.04□□□□□ -2.42
TM9SF3-204ENST00000475401 MAP1AP78559 2803 aaPredicted RBP-0.04□□□□□ -2.42
TM9SF3-204ENST00000475401 SACSQ9NZJ4 4579 aa-0.04□□□□□ -2.42
TM9SF3-204ENST00000475401 SPG11Q96JI7 2443 aa-0.04□□□□□ -2.42
TM9SF3-204ENST00000475401 HYDINQ4G0P3 5121 aa-0.04□□□□□ -2.42
TM9SF3-204ENST00000475401 KMT2CQ8NEZ4 4911 aaKnown RBP-0.05□□□□□ -2.42
TM9SF3-204ENST00000475401 NBEAL1Q6ZS30 2694 aa-0.05□□□□□ -2.42
TM9SF3-204ENST00000475401 IGLV5-48A0A075B6I7 105 aa-0.05□□□□□ -2.42
TM9SF3-204ENST00000475401 SPRR2EP22531 72 aa-0.05□□□□□ -2.42
TM9SF3-204ENST00000475401 DNAH9Q9NYC9 4486 aa-0.05□□□□□ -2.42
TM9SF3-204ENST00000475401 STAB2Q8WWQ8 2551 aa-0.05□□□□□ -2.42
TM9SF3-204ENST00000475401 FAT3Q8TDW7 4589 aa-0.06□□□□□ -2.42
TM9SF3-204ENST00000475401 ABCC8Q09428 1581 aa-0.06□□□□□ -2.42
TM9SF3-204ENST00000475401 PDZD2O15018 2839 aa-0.06□□□□□ -2.42
TM9SF3-204ENST00000475401 NEBP20929 6669 aa-0.06□□□□□ -2.42
TM9SF3-204ENST00000475401 MT1AP04731 61 aa-0.06□□□□□ -2.42
TM9SF3-204ENST00000475401 KRTAP6-1Q3LI64 71 aa-0.06□□□□□ -2.42
TM9SF3-204ENST00000475401 LMO7Q8WWI1 1683 aa-0.06□□□□□ -2.42
TM9SF3-204ENST00000475401 SRRM2Q9UQ35 2752 aaKnown RBP-0.06□□□□□ -2.42
TM9SF3-204ENST00000475401 RYR3Q15413 4870 aa-0.07□□□□□ -2.42
TM9SF3-204ENST00000475401 MUC2Q02817 5179 aa-0.07□□□□□ -2.42
TM9SF3-204ENST00000475401 PKHD1L1Q86WI1 4243 aa-0.07□□□□□ -2.42
TM9SF3-204ENST00000475401 ANK3Q12955 4377 aaKnown RBP-0.07□□□□□ -2.42
TM9SF3-204ENST00000475401 PLNP26678 52 aa-0.07□□□□□ -2.42
TM9SF3-204ENST00000475401 EFCAB6Q5THR3 1501 aa-0.08□□□□□ -2.42
TM9SF3-204ENST00000475401 ZZEF1O43149 2961 aa-0.08□□□□□ -2.42
TM9SF3-204ENST00000475401 PCLOQ9Y6V0 5065 aa-0.09□□□□□ -2.42
TM9SF3-204ENST00000475401 HERC2O95714 4834 aa-0.09□□□□□ -2.42
TM9SF3-204ENST00000475401 DNAH3Q8TD57 4116 aa-0.09□□□□□ -2.42
TM9SF3-204ENST00000475401 KIF21BO75037 1637 aa-0.09□□□□□ -2.42
TM9SF3-204ENST00000475401 KRTAP19-7Q3SYF9 63 aa-0.1□□□□□ -2.43
TM9SF3-204ENST00000475401 CMC2Q9NRP2 79 aa-0.1□□□□□ -2.43
TM9SF3-204ENST00000475401 A0A1B0GUL6 1792 aa-0.1□□□□□ -2.43
TM9SF3-204ENST00000475401 MTORP42345 2549 aa-0.1□□□□□ -2.43
TM9SF3-204ENST00000475401 TGP01266 2768 aa-0.1□□□□□ -2.43
TM9SF3-204ENST00000475401 DOPEY1Q5JWR5 2465 aa-0.1□□□□□ -2.43
TM9SF3-204ENST00000475401 EPG5Q9HCE0 2579 aa-0.1□□□□□ -2.43
TM9SF3-204ENST00000475401 KIAA1109Q2LD37 5005 aa-0.11□□□□□ -2.43
TM9SF3-204ENST00000475401 MXRA5Q9NR99 2828 aa-0.11□□□□□ -2.43
TM9SF3-204ENST00000475401 RYR1P21817 5038 aa-0.11□□□□□ -2.43
TM9SF3-204ENST00000475401 DMXL1Q9Y485 3027 aa-0.11□□□□□ -2.43
TM9SF3-204ENST00000475401 GCN1Q92616 2671 aaKnown RBP-0.11□□□□□ -2.43
TM9SF3-204ENST00000475401 ACACAQ13085 2346 aa-0.11□□□□□ -2.43
TM9SF3-204ENST00000475401 UBR4Q5T4S7 5183 aa-0.11□□□□□ -2.43
TM9SF3-204ENST00000475401 HIVEP1P15822 2718 aa-0.11□□□□□ -2.43
TM9SF3-204ENST00000475401 HTTP42858 3142 aa-0.12□□□□□ -2.43
TM9SF3-204ENST00000475401 LRRK2Q5S007 2527 aa-0.12□□□□□ -2.43
TM9SF3-204ENST00000475401 STARD9Q9P2P6 4700 aa-0.12□□□□□ -2.43
TM9SF3-204ENST00000475401 APOBP04114 4563 aaKnown RBP-0.13□□□□□ -2.43
TM9SF3-204ENST00000475401 FAM186AA6NE01 2351 aa-0.13□□□□□ -2.43
TM9SF3-204ENST00000475401 AKAP9Q99996 3911 aa-0.13□□□□□ -2.43
TM9SF3-204ENST00000475401 NOP10Q9NPE3 64 aaKnown RBP-0.13□□□□□ -2.43
TM9SF3-204ENST00000475401 EPPK1P58107 5090 aaKnown RBP-0.13□□□□□ -2.43
TM9SF3-204ENST00000475401 USH2AO75445 5202 aa-0.13□□□□□ -2.43
TM9SF3-204ENST00000475401 RNF213Q63HN8 5207 aa-0.13□□□□□ -2.43
TM9SF3-204ENST00000475401 DEFB110Q30KQ9 67 aa-0.14□□□□□ -2.43
TM9SF3-204ENST00000475401 FASNP49327 2511 aaKnown RBP-0.14□□□□□ -2.43
TM9SF3-204ENST00000475401 ANKRD11Q6UB99 2663 aaPredicted RBP-0.14□□□□□ -2.43
TM9SF3-204ENST00000475401 BIRC6Q9NR09 4857 aa-0.15□□□□□ -2.43
TM9SF3-204ENST00000475401 TACC2O95359 2948 aa-0.15□□□□□ -2.43
TM9SF3-204ENST00000475401 SNRPGP15A8MWD9 76 aa-0.15□□□□□ -2.43
TM9SF3-204ENST00000475401 SPRR2FQ96RM1 72 aa-0.15□□□□□ -2.43
TM9SF3-204ENST00000475401 IQGAP1P46940 1657 aa-0.15□□□□□ -2.43
TM9SF3-204ENST00000475401 KALRNO60229 2985 aa-0.15□□□□□ -2.43
TM9SF3-204ENST00000475401 CCDC168Q8NDH2 2452 aa-0.15□□□□□ -2.43
TM9SF3-204ENST00000475401 TEP1Q99973 2627 aaKnown RBP-0.16□□□□□ -2.43
TM9SF3-204ENST00000475401 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.16□□□□□ -2.43
TM9SF3-204ENST00000475401 FAM208AQ9UK61 1670 aaKnown RBP-0.16□□□□□ -2.44
TM9SF3-204ENST00000475401 LINC01546A6NGU7 62 aa-0.16□□□□□ -2.44
TM9SF3-204ENST00000475401 KRTAP19-8Q3LI54 63 aa-0.16□□□□□ -2.44
TM9SF3-204ENST00000475401 RYR2Q92736 4967 aa-0.16□□□□□ -2.44
TM9SF3-204ENST00000475401 NBPF19A0A087WUL8 3843 aa-0.16□□□□□ -2.44
TM9SF3-204ENST00000475401 NBEAQ8NFP9 2946 aa-0.17□□□□□ -2.44
TM9SF3-204ENST00000475401 LAMA5O15230 3695 aa-0.17□□□□□ -2.44
TM9SF3-204ENST00000475401 UTP20O75691 2785 aaKnown RBP-0.17□□□□□ -2.44
TM9SF3-204ENST00000475401 NBEAL2Q6ZNJ1 2754 aa-0.17□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 153.3 ms