RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 IGHV6-1A0A0B4J1U7 121 aa7.81□□□□□ -1.16
TRAF4-210ENST00000475329 PCP4P48539 62 aa7.81□□□□□ -1.16
TRAF4-210ENST00000475329 MMP24-AS1A0A0U1RRL7 71 aa7.79□□□□□ -1.16
TRAF4-210ENST00000475329 CASC2Q6XLA1 102 aa7.79□□□□□ -1.16
TRAF4-210ENST00000475329 WFDC13Q8IUB5 93 aa7.79□□□□□ -1.16
TRAF4-210ENST00000475329 C8orf17Q9NRJ1 99 aa7.79□□□□□ -1.16
TRAF4-210ENST00000475329 SMIM20Q8N5G0 67 aa7.78□□□□□ -1.16
TRAF4-210ENST00000475329 OXTP01178 125 aa7.77□□□□□ -1.17
TRAF4-210ENST00000475329 KRTAP29-1A8MX34 341 aaPredicted RBP7.76□□□□□ -1.17
TRAF4-210ENST00000475329 C8orf87E5RJ46 101 aa7.76□□□□□ -1.17
TRAF4-210ENST00000475329 ABCA13Q86UQ4 5058 aa7.75□□□□□ -1.17
TRAF4-210ENST00000475329 FLG2Q5D862 2391 aaPredicted RBP7.75□□□□□ -1.17
TRAF4-210ENST00000475329 hDV103S1A0JD37 113 aa7.75□□□□□ -1.17
TRAF4-210ENST00000475329 MT1HL1P0DM35 61 aa7.75□□□□□ -1.17
TRAF4-210ENST00000475329 SERP2Q8N6R1 65 aa7.74□□□□□ -1.17
TRAF4-210ENST00000475329 FAT3Q8TDW7 4589 aa7.73□□□□□ -1.17
TRAF4-210ENST00000475329 TRAV7A0A075B6U4 112 aa7.73□□□□□ -1.17
TRAF4-210ENST00000475329 NOTCH2NLQ7Z3S9 236 aa7.72□□□□□ -1.17
TRAF4-210ENST00000475329 TMEM254Q8TBM7 123 aa7.72□□□□□ -1.17
TRAF4-210ENST00000475329 OCR1Q9BZK8 76 aa7.71□□□□□ -1.18
TRAF4-210ENST00000475329 LRP1Q07954 4544 aaKnown RBP7.71□□□□□ -1.18
TRAF4-210ENST00000475329 TNXBP22105 4242 aa7.71□□□□□ -1.18
TRAF4-210ENST00000475329 COX7CP15954 63 aa7.7□□□□□ -1.18
TRAF4-210ENST00000475329 LINC00313P59037 77 aa7.7□□□□□ -1.18
TRAF4-210ENST00000475329 J3QL48 77 aa7.69□□□□□ -1.18
TRAF4-210ENST00000475329 RETNLBQ9BQ08 111 aa7.69□□□□□ -1.18
TRAF4-210ENST00000475329 MRPL34Q9BQ48 92 aaKnown RBP7.69□□□□□ -1.18
TRAF4-210ENST00000475329 UQCRQO14949 82 aa7.67□□□□□ -1.18
TRAF4-210ENST00000475329 CCDC179H3BU77 68 aa7.64□□□□□ -1.19
TRAF4-210ENST00000475329 NDUFS5O43920 106 aa7.64□□□□□ -1.19
TRAF4-210ENST00000475329 FP248Q71RG6 208 aaPredicted RBP7.64□□□□□ -1.19
TRAF4-210ENST00000475329 KRTAP16-1A8MUX0 517 aa7.63□□□□□ -1.19
TRAF4-210ENST00000475329 TP53AIP1Q9HCN2 124 aa7.63□□□□□ -1.19
TRAF4-210ENST00000475329 DMBT1Q9UGM3 2413 aaPredicted RBP7.62□□□□□ -1.19
TRAF4-210ENST00000475329 MYCBP2O75592 4640 aa7.59□□□□□ -1.19
TRAF4-210ENST00000475329 C5orf47Q569G3 176 aa7.59□□□□□ -1.19
TRAF4-210ENST00000475329 Q8N9P0 234 aaPredicted RBP7.59□□□□□ -1.19
TRAF4-210ENST00000475329 C9orf92A6NGG3 77 aa7.58□□□□□ -1.2
TRAF4-210ENST00000475329 C20orf197Q8N268 126 aa7.58□□□□□ -1.2
TRAF4-210ENST00000475329 TRAV22A0A0B4J277 110 aa7.56□□□□□ -1.2
TRAF4-210ENST00000475329 H0Y9P7 68 aa7.56□□□□□ -1.2
TRAF4-210ENST00000475329 MP68P56378 58 aa7.56□□□□□ -1.2
TRAF4-210ENST00000475329 IGLV7-46A0A075B6I9 117 aa7.55□□□□□ -1.2
TRAF4-210ENST00000475329 A0A0U1RQV1 116 aa7.53□□□□□ -1.2
TRAF4-210ENST00000475329 KLKP1Q107X0 134 aa7.53□□□□□ -1.2
TRAF4-210ENST00000475329 SNURFQ9Y675 71 aa7.53□□□□□ -1.2
TRAF4-210ENST00000475329 H3BPC8 53 aa7.52□□□□□ -1.21
TRAF4-210ENST00000475329 PRR4Q16378 134 aa7.52□□□□□ -1.21
TRAF4-210ENST00000475329 C20orf166-AS1Q96NR2 134 aa7.5□□□□□ -1.21
TRAF4-210ENST00000475329 A8MUU9 505 aa7.49□□□□□ -1.21
TRAF4-210ENST00000475329 KRTAP13-3Q3SY46 172 aa7.49□□□□□ -1.21
TRAF4-210ENST00000475329 LINC00208Q96KT6 92 aa7.49□□□□□ -1.21
TRAF4-210ENST00000475329 HERC1Q15751 4861 aa7.49□□□□□ -1.21
TRAF4-210ENST00000475329 CYSTM1Q9H1C7 97 aa7.48□□□□□ -1.21
TRAF4-210ENST00000475329 NDUFC1O43677 76 aa7.47□□□□□ -1.21
TRAF4-210ENST00000475329 Q5W150 140 aa7.47□□□□□ -1.21
TRAF4-210ENST00000475329 C1orf64Q8NEQ6 169 aa7.47□□□□□ -1.21
TRAF4-210ENST00000475329 ZCCHC13Q8WW36 166 aaKnown RBP7.47□□□□□ -1.21
TRAF4-210ENST00000475329 Q75L30 129 aa7.45□□□□□ -1.22
TRAF4-210ENST00000475329 TPRXLQ17RH7 258 aa7.43□□□□□ -1.22
TRAF4-210ENST00000475329 LOC101927531A0A1B0GV80 90 aa7.42□□□□□ -1.22
TRAF4-210ENST00000475329 H7BZZ5 65 aa7.42□□□□□ -1.22
TRAF4-210ENST00000475329 XP32Q5T750 250 aa7.41□□□□□ -1.22
TRAF4-210ENST00000475329 TMEM258P61165 79 aa7.39□□□□□ -1.23
TRAF4-210ENST00000475329 RPL37P61927 97 aaKnown RBP7.38□□□□□ -1.23
TRAF4-210ENST00000475329 IGKV2-30P06310 120 aa7.37□□□□□ -1.23
TRAF4-210ENST00000475329 CYP4F30PQ9H0H9 118 aa7.36□□□□□ -1.23
TRAF4-210ENST00000475329 PCOTHQ58A44 107 aa7.34□□□□□ -1.23
TRAF4-210ENST00000475329 ATP11AUNQ6ZP68 121 aa7.34□□□□□ -1.23
TRAF4-210ENST00000475329 IGKV2D-30A0A075B6S6 120 aa7.33□□□□□ -1.24
TRAF4-210ENST00000475329 FAM236DA0A1B0GTK5 79 aa7.32□□□□□ -1.24
TRAF4-210ENST00000475329 FAM236CP0DP71 79 aa7.32□□□□□ -1.24
TRAF4-210ENST00000475329 C7orf65Q6ZTY9 151 aa7.32□□□□□ -1.24
TRAF4-210ENST00000475329 ATP5EP56381 51 aaPredicted RBP7.31□□□□□ -1.24
TRAF4-210ENST00000475329 SPANXA2-OT1Q8N9U9 137 aa7.29□□□□□ -1.24
TRAF4-210ENST00000475329 HRES1P13985 223 aa7.24□□□□□ -1.25
TRAF4-210ENST00000475329 SPINK7P58062 85 aa7.24□□□□□ -1.25
TRAF4-210ENST00000475329 SEC61BP60468 96 aaKnown RBP7.18□□□□□ -1.26
TRAF4-210ENST00000475329 HMCN2Q8NDA2 5059 aa7.17□□□□□ -1.26
TRAF4-210ENST00000475329 LPAP08519 4548 aa7.16□□□□□ -1.26
TRAF4-210ENST00000475329 SERP1Q9Y6X1 66 aa7.16□□□□□ -1.26
TRAF4-210ENST00000475329 DMAC1Q96GE9 116 aa7.14□□□□□ -1.27
TRAF4-210ENST00000475329 C4orf26Q17RF5 130 aa7.12□□□□□ -1.27
TRAF4-210ENST00000475329 LRP2P98164 4655 aa7.12□□□□□ -1.27
TRAF4-210ENST00000475329 RPS28P62857 69 aaKnown RBP7.1□□□□□ -1.27
TRAF4-210ENST00000475329 ACYP2P14621 99 aa7.09□□□□□ -1.27
TRAF4-210ENST00000475329 A8MUN3 132 aa7.08□□□□□ -1.28
TRAF4-210ENST00000475329 UBR4Q5T4S7 5183 aa7.08□□□□□ -1.28
TRAF4-210ENST00000475329 COX6B2Q6YFQ2 88 aa7.07□□□□□ -1.28
TRAF4-210ENST00000475329 COA5Q86WW8 74 aa7.07□□□□□ -1.28
TRAF4-210ENST00000475329 MUC17Q685J3 4493 aa7.01□□□□□ -1.29
TRAF4-210ENST00000475329 KRTAP3-1Q9BYR8 98 aa7.01□□□□□ -1.29
TRAF4-210ENST00000475329 CHKB-CPT1BH3BT56 60 aa7□□□□□ -1.29
TRAF4-210ENST00000475329 MPLKIPQ8TAP9 179 aa6.99□□□□□ -1.29
TRAF4-210ENST00000475329 RBM12B-AS1Q9P1G2 102 aa6.99□□□□□ -1.29
TRAF4-210ENST00000475329 KRTAP4-1Q9BYQ7 146 aa6.98□□□□□ -1.29
TRAF4-210ENST00000475329 SMIM26A0A096LP01 95 aa6.96□□□□□ -1.3
TRAF4-210ENST00000475329 H1FX-AS1Q4G0G2 97 aa6.9□□□□□ -1.3
TRAF4-210ENST00000475329 SPTSSBQ8NFR3 76 aa6.88□□□□□ -1.31
TRAF4-210ENST00000475329 RNF213Q63HN8 5207 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms