RNA–Protein interactions for RNA: ENST00000474916.1

CDK11A-214, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 752 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-214ENST00000474916 MPLKIPQ8TAP9 179 aa8.24□□□□□ -1.09
CDK11A-214ENST00000474916 USH2AO75445 5202 aa8.23□□□□□ -1.09
CDK11A-214ENST00000474916 RBM3P98179 157 aaKnown RBP8.23□□□□□ -1.09
CDK11A-214ENST00000474916 A0A1B0GVX0 72 aa8.21□□□□□ -1.1
CDK11A-214ENST00000474916 NAA38Q9BRA0 125 aaKnown RBP8.21□□□□□ -1.1
CDK11A-214ENST00000474916 BAALC-AS2P0C853 105 aa8.2□□□□□ -1.1
CDK11A-214ENST00000474916 FAM236DA0A1B0GTK5 79 aa8.19□□□□□ -1.1
CDK11A-214ENST00000474916 FAM236CP0DP71 79 aa8.19□□□□□ -1.1
CDK11A-214ENST00000474916 DSCR8Q96T75 97 aa8.19□□□□□ -1.1
CDK11A-214ENST00000474916 MT2AP02795 61 aa8.18□□□□□ -1.1
CDK11A-214ENST00000474916 FCGBPQ9Y6R7 5405 aaPredicted RBP8.16□□□□□ -1.1
CDK11A-214ENST00000474916 C8orf87E5RJ46 101 aa8.16□□□□□ -1.1
CDK11A-214ENST00000474916 C9JAW5 83 aa8.15□□□□□ -1.1
CDK11A-214ENST00000474916 MT1FP04733 61 aa8.14□□□□□ -1.11
CDK11A-214ENST00000474916 Q6ZQT0 140 aa8.14□□□□□ -1.11
CDK11A-214ENST00000474916 RBM12B-AS1Q9P1G2 102 aa8.13□□□□□ -1.11
CDK11A-214ENST00000474916 ZCCHC13Q8WW36 166 aaKnown RBP8.12□□□□□ -1.11
CDK11A-214ENST00000474916 J3KT08 172 aa8.09□□□□□ -1.11
CDK11A-214ENST00000474916 ATXN8Q156A1 80 aa8.09□□□□□ -1.11
CDK11A-214ENST00000474916 SPINK7P58062 85 aa8.07□□□□□ -1.12
CDK11A-214ENST00000474916 Q8N9P0 234 aaPredicted RBP8.07□□□□□ -1.12
CDK11A-214ENST00000474916 LOC110117498A0A087WWA1 95 aa8.06□□□□□ -1.12
CDK11A-214ENST00000474916 IGKV3D-7A0A0C4DH55 119 aa8.06□□□□□ -1.12
CDK11A-214ENST00000474916 M0R143 59 aa8.06□□□□□ -1.12
CDK11A-214ENST00000474916 C14orf132Q9NPU4 83 aa8.06□□□□□ -1.12
CDK11A-214ENST00000474916 C8orf17Q9NRJ1 99 aa8.06□□□□□ -1.12
CDK11A-214ENST00000474916 KRTAP9-3Q9BYQ3 159 aa8.05□□□□□ -1.12
CDK11A-214ENST00000474916 A8MWP4 228 aa8.04□□□□□ -1.12
CDK11A-214ENST00000474916 JMJD7-PLA2G4BH0Y9G9 81 aa8.04□□□□□ -1.12
CDK11A-214ENST00000474916 NDUFB1O75438 58 aa8.02□□□□□ -1.13
CDK11A-214ENST00000474916 C21orf62-AS1Q17RA5 79 aa8.02□□□□□ -1.13
CDK11A-214ENST00000474916 KRTAP19-1Q8IUB9 90 aa8.02□□□□□ -1.13
CDK11A-214ENST00000474916 KRTAP10-10P60014 251 aa8.01□□□□□ -1.13
CDK11A-214ENST00000474916 Q6ZVQ6 151 aa7.98□□□□□ -1.13
CDK11A-214ENST00000474916 SMIM6P0DI80 62 aa7.97□□□□□ -1.13
CDK11A-214ENST00000474916 BATFQ16520 125 aa7.97□□□□□ -1.13
CDK11A-214ENST00000474916 WFDC13Q8IUB5 93 aa7.97□□□□□ -1.13
CDK11A-214ENST00000474916 MACF1Q9UPN3 7388 aaKnown RBP7.96□□□□□ -1.13
CDK11A-214ENST00000474916 SYNE2Q8WXH0 6885 aaKnown RBP7.96□□□□□ -1.13
CDK11A-214ENST00000474916 A0A1B0GW54 56 aa7.96□□□□□ -1.14
CDK11A-214ENST00000474916 PRR15Q8IV56 129 aa7.96□□□□□ -1.14
CDK11A-214ENST00000474916 MMP24-AS1A0A0U1RRL7 71 aa7.95□□□□□ -1.14
CDK11A-214ENST00000474916 PDE6GP18545 87 aa7.95□□□□□ -1.14
CDK11A-214ENST00000474916 MTURNQ8N3F0 131 aa7.95□□□□□ -1.14
CDK11A-214ENST00000474916 LYRM7Q5U5X0 104 aa7.94□□□□□ -1.14
CDK11A-214ENST00000474916 NREPQ16612 68 aa7.93□□□□□ -1.14
CDK11A-214ENST00000474916 K7EQZ3 153 aa7.91□□□□□ -1.14
CDK11A-214ENST00000474916 MRPL34Q9BQ48 92 aaKnown RBP7.9□□□□□ -1.14
CDK11A-214ENST00000474916 TMEM254Q8TBM7 123 aa7.89□□□□□ -1.15
CDK11A-214ENST00000474916 TAX1BP3O14907 124 aa7.88□□□□□ -1.15
CDK11A-214ENST00000474916 C9orf118A6NHY6 69 aa7.87□□□□□ -1.15
CDK11A-214ENST00000474916 TSTD3H0UI37 97 aa7.87□□□□□ -1.15
CDK11A-214ENST00000474916 hDV103S1A0JD37 113 aa7.85□□□□□ -1.15
CDK11A-214ENST00000474916 H3BT86 120 aa7.85□□□□□ -1.15
CDK11A-214ENST00000474916 A0A1W2PPM0 123 aa7.84□□□□□ -1.15
CDK11A-214ENST00000474916 LOC105371267A0A1B0GV96 52 aa7.82□□□□□ -1.16
CDK11A-214ENST00000474916 NDUFS5O43920 106 aa7.82□□□□□ -1.16
CDK11A-214ENST00000474916 Q5W150 140 aa7.82□□□□□ -1.16
CDK11A-214ENST00000474916 Q8N9L7 120 aa7.81□□□□□ -1.16
CDK11A-214ENST00000474916 BPY2O14599 106 aa7.78□□□□□ -1.16
CDK11A-214ENST00000474916 IGKV2D-30A0A075B6S6 120 aa7.77□□□□□ -1.17
CDK11A-214ENST00000474916 IGKV2-30P06310 120 aa7.77□□□□□ -1.17
CDK11A-214ENST00000474916 H1FX-AS1Q4G0G2 97 aa7.77□□□□□ -1.17
CDK11A-214ENST00000474916 KRTAP19-6Q3LI70 58 aa7.73□□□□□ -1.17
CDK11A-214ENST00000474916 SPCS1Q9Y6A9 102 aa7.72□□□□□ -1.17
CDK11A-214ENST00000474916 HCG22E2RYF7 251 aa7.71□□□□□ -1.18
CDK11A-214ENST00000474916 CASC2Q6XLA1 102 aa7.71□□□□□ -1.18
CDK11A-214ENST00000474916 C7orf65Q6ZTY9 151 aa7.71□□□□□ -1.18
CDK11A-214ENST00000474916 C4orf26Q17RF5 130 aa7.67□□□□□ -1.18
CDK11A-214ENST00000474916 KRTAP6-3Q3LI67 103 aa7.67□□□□□ -1.18
CDK11A-214ENST00000474916 PRO0461Q9UI25 63 aa7.67□□□□□ -1.18
CDK11A-214ENST00000474916 LINC00846Q9NV44 126 aa7.66□□□□□ -1.18
CDK11A-214ENST00000474916 KRTAP3-1Q9BYR8 98 aa7.6□□□□□ -1.19
CDK11A-214ENST00000474916 CXCL6P80162 114 aa7.59□□□□□ -1.19
CDK11A-214ENST00000474916 K7EP34 96 aa7.58□□□□□ -1.2
CDK11A-214ENST00000474916 C5orf47Q569G3 176 aa7.56□□□□□ -1.2
CDK11A-214ENST00000474916 COL5A1-AS1Q5SY13 56 aa7.56□□□□□ -1.2
CDK11A-214ENST00000474916 UBL5Q9BZL1 73 aa7.56□□□□□ -1.2
CDK11A-214ENST00000474916 NEBP20929 6669 aa7.54□□□□□ -1.2
CDK11A-214ENST00000474916 C1orf64Q8NEQ6 169 aa7.48□□□□□ -1.21
CDK11A-214ENST00000474916 S4R3F8 94 aa7.48□□□□□ -1.21
CDK11A-214ENST00000474916 LOC100996750A0A140TA64 210 aa7.47□□□□□ -1.21
CDK11A-214ENST00000474916 LCA10Q71F78 164 aa7.47□□□□□ -1.21
CDK11A-214ENST00000474916 KRTAP4-6Q9BYQ5 205 aa7.47□□□□□ -1.21
CDK11A-214ENST00000474916 KRTAP20-1Q3LI63 56 aa7.45□□□□□ -1.22
CDK11A-214ENST00000474916 FAM236AA0A1B0GUQ0 79 aa7.44□□□□□ -1.22
CDK11A-214ENST00000474916 FAM236BA0A1B0GV22 79 aa7.44□□□□□ -1.22
CDK11A-214ENST00000474916 MT1BP07438 61 aa7.44□□□□□ -1.22
CDK11A-214ENST00000474916 MUC12Q9UKN1 5478 aa7.44□□□□□ -1.22
CDK11A-214ENST00000474916 ETDBQ3ZM63 59 aa7.43□□□□□ -1.22
CDK11A-214ENST00000474916 CSAG1Q6PB30 78 aa7.39□□□□□ -1.23
CDK11A-214ENST00000474916 TP53AIP1Q9HCN2 124 aa7.39□□□□□ -1.23
CDK11A-214ENST00000474916 A0A087WVE0 104 aa7.38□□□□□ -1.23
CDK11A-214ENST00000474916 GTF2H5Q6ZYL4 71 aa7.38□□□□□ -1.23
CDK11A-214ENST00000474916 F8W1H4 67 aa7.37□□□□□ -1.23
CDK11A-214ENST00000474916 SPRR2GQ9BYE4 73 aa7.37□□□□□ -1.23
CDK11A-214ENST00000474916 PCP4L1A6NKN8 68 aa7.36□□□□□ -1.23
CDK11A-214ENST00000474916 KRTAP19-8Q3LI54 63 aa7.36□□□□□ -1.23
CDK11A-214ENST00000474916 CYP4F30PQ9H0H9 118 aa7.35□□□□□ -1.23
CDK11A-214ENST00000474916 Q5VV11 94 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms