RNA–Protein interactions for RNA: ENST00000474887.5

DNMT3A-211, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-211ENST00000474887 NOTCH2NLQ7Z3S9 236 aa7.08□□□□□ -1.28
DNMT3A-211ENST00000474887 VPS25Q9BRG1 176 aa7.08□□□□□ -1.28
DNMT3A-211ENST00000474887 MPLKIPQ8TAP9 179 aa7.07□□□□□ -1.28
DNMT3A-211ENST00000474887 JMJD7-PLA2G4BH0Y9G9 81 aa7.06□□□□□ -1.28
DNMT3A-211ENST00000474887 NDUFB1O75438 58 aa7.06□□□□□ -1.28
DNMT3A-211ENST00000474887 PDE6GP18545 87 aa7.06□□□□□ -1.28
DNMT3A-211ENST00000474887 MTURNQ8N3F0 131 aa7.06□□□□□ -1.28
DNMT3A-211ENST00000474887 KRTAP9-8Q9BYQ0 159 aa7.06□□□□□ -1.28
DNMT3A-211ENST00000474887 M0R143 59 aa7.05□□□□□ -1.28
DNMT3A-211ENST00000474887 Q6ZQT0 140 aa7.05□□□□□ -1.28
DNMT3A-211ENST00000474887 HRES1P13985 223 aa7.04□□□□□ -1.28
DNMT3A-211ENST00000474887 ATXN8Q156A1 80 aa7.03□□□□□ -1.28
DNMT3A-211ENST00000474887 TMA7Q9Y2S6 64 aaKnown RBP7.02□□□□□ -1.29
DNMT3A-211ENST00000474887 LOC110117498A0A087WWA1 95 aa7.01□□□□□ -1.29
DNMT3A-211ENST00000474887 ZCCHC13Q8WW36 166 aaKnown RBP7.01□□□□□ -1.29
DNMT3A-211ENST00000474887 Q8N9P0 234 aaPredicted RBP7□□□□□ -1.29
DNMT3A-211ENST00000474887 A8MWP4 228 aa6.98□□□□□ -1.29
DNMT3A-211ENST00000474887 LYRM7Q5U5X0 104 aa6.98□□□□□ -1.29
DNMT3A-211ENST00000474887 SPINK7P58062 85 aa6.96□□□□□ -1.3
DNMT3A-211ENST00000474887 USH2AO75445 5202 aa6.95□□□□□ -1.3
DNMT3A-211ENST00000474887 MT2AP02795 61 aa6.94□□□□□ -1.3
DNMT3A-211ENST00000474887 C8orf17Q9NRJ1 99 aa6.93□□□□□ -1.3
DNMT3A-211ENST00000474887 SMIM6P0DI80 62 aa6.91□□□□□ -1.3
DNMT3A-211ENST00000474887 NREPQ16612 68 aa6.91□□□□□ -1.3
DNMT3A-211ENST00000474887 IGKV3D-7A0A0C4DH55 119 aa6.9□□□□□ -1.3
DNMT3A-211ENST00000474887 Q6ZVQ6 151 aa6.9□□□□□ -1.3
DNMT3A-211ENST00000474887 PRR15Q8IV56 129 aa6.9□□□□□ -1.3
DNMT3A-211ENST00000474887 KRTAP10-10P60014 251 aa6.89□□□□□ -1.31
DNMT3A-211ENST00000474887 SSPOA2VEC9 5147 aa6.88□□□□□ -1.31
DNMT3A-211ENST00000474887 NAA38Q9BRA0 125 aaKnown RBP6.88□□□□□ -1.31
DNMT3A-211ENST00000474887 C14orf132Q9NPU4 83 aa6.88□□□□□ -1.31
DNMT3A-211ENST00000474887 TSTD3H0UI37 97 aa6.86□□□□□ -1.31
DNMT3A-211ENST00000474887 MT1FP04733 61 aa6.86□□□□□ -1.31
DNMT3A-211ENST00000474887 TMEM254Q8TBM7 123 aa6.86□□□□□ -1.31
DNMT3A-211ENST00000474887 KRTAP9-3Q9BYQ3 159 aa6.85□□□□□ -1.31
DNMT3A-211ENST00000474887 H3BT86 120 aa6.84□□□□□ -1.31
DNMT3A-211ENST00000474887 WFDC13Q8IUB5 93 aa6.84□□□□□ -1.31
DNMT3A-211ENST00000474887 MRPL34Q9BQ48 92 aaKnown RBP6.84□□□□□ -1.31
DNMT3A-211ENST00000474887 MMP24-AS1A0A0U1RRL7 71 aa6.8□□□□□ -1.32
DNMT3A-211ENST00000474887 hDV103S1A0JD37 113 aa6.8□□□□□ -1.32
DNMT3A-211ENST00000474887 LINC00846Q9NV44 126 aa6.8□□□□□ -1.32
DNMT3A-211ENST00000474887 C9orf118A6NHY6 69 aa6.79□□□□□ -1.32
DNMT3A-211ENST00000474887 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.79□□□□□ -1.32
DNMT3A-211ENST00000474887 LCE2BO14633 110 aa6.79□□□□□ -1.32
DNMT3A-211ENST00000474887 BPY2O14599 106 aa6.77□□□□□ -1.33
DNMT3A-211ENST00000474887 BATFQ16520 125 aa6.77□□□□□ -1.33
DNMT3A-211ENST00000474887 FCGBPQ9Y6R7 5405 aaPredicted RBP6.77□□□□□ -1.33
DNMT3A-211ENST00000474887 A0A1W2PPM0 123 aa6.76□□□□□ -1.33
DNMT3A-211ENST00000474887 NDUFS5O43920 106 aa6.75□□□□□ -1.33
DNMT3A-211ENST00000474887 H1FX-AS1Q4G0G2 97 aa6.75□□□□□ -1.33
DNMT3A-211ENST00000474887 KRTAP9-7A8MTY7 169 aa6.74□□□□□ -1.33
DNMT3A-211ENST00000474887 K7EQZ3 153 aa6.74□□□□□ -1.33
DNMT3A-211ENST00000474887 KRTAP19-1Q8IUB9 90 aa6.73□□□□□ -1.33
DNMT3A-211ENST00000474887 TAX1BP3O14907 124 aa6.72□□□□□ -1.33
DNMT3A-211ENST00000474887 C7orf65Q6ZTY9 151 aa6.7□□□□□ -1.34
DNMT3A-211ENST00000474887 CASC2Q6XLA1 102 aa6.68□□□□□ -1.34
DNMT3A-211ENST00000474887 CXCL6P80162 114 aa6.67□□□□□ -1.34
DNMT3A-211ENST00000474887 IGKV2D-30A0A075B6S6 120 aa6.66□□□□□ -1.34
DNMT3A-211ENST00000474887 IGKV2-30P06310 120 aa6.66□□□□□ -1.34
DNMT3A-211ENST00000474887 SPCS1Q9Y6A9 102 aa6.65□□□□□ -1.34
DNMT3A-211ENST00000474887 KRTAP19-6Q3LI70 58 aa6.64□□□□□ -1.35
DNMT3A-211ENST00000474887 Q5W150 140 aa6.64□□□□□ -1.35
DNMT3A-211ENST00000474887 UBL5Q9BZL1 73 aa6.63□□□□□ -1.35
DNMT3A-211ENST00000474887 HCG22E2RYF7 251 aa6.62□□□□□ -1.35
DNMT3A-211ENST00000474887 LOC105371267A0A1B0GV96 52 aa6.61□□□□□ -1.35
DNMT3A-211ENST00000474887 Q8N9L7 120 aa6.59□□□□□ -1.35
DNMT3A-211ENST00000474887 COL5A1-AS1Q5SY13 56 aa6.58□□□□□ -1.36
DNMT3A-211ENST00000474887 SMCPP49901 116 aaPredicted RBP6.57□□□□□ -1.36
DNMT3A-211ENST00000474887 MACF1Q9UPN3 7388 aaKnown RBP6.55□□□□□ -1.36
DNMT3A-211ENST00000474887 C4orf26Q17RF5 130 aa6.55□□□□□ -1.36
DNMT3A-211ENST00000474887 TP53AIP1Q9HCN2 124 aa6.55□□□□□ -1.36
DNMT3A-211ENST00000474887 PRO0461Q9UI25 63 aa6.53□□□□□ -1.36
DNMT3A-211ENST00000474887 K7EP34 96 aa6.52□□□□□ -1.37
DNMT3A-211ENST00000474887 CSAG1Q6PB30 78 aa6.48□□□□□ -1.37
DNMT3A-211ENST00000474887 GTF2H5Q6ZYL4 71 aa6.48□□□□□ -1.37
DNMT3A-211ENST00000474887 SYNE2Q8WXH0 6885 aaKnown RBP6.48□□□□□ -1.37
DNMT3A-211ENST00000474887 F8W1H4 67 aa6.47□□□□□ -1.37
DNMT3A-211ENST00000474887 C1orf64Q8NEQ6 169 aa6.46□□□□□ -1.38
DNMT3A-211ENST00000474887 S4R3F8 94 aa6.46□□□□□ -1.38
DNMT3A-211ENST00000474887 C5orf47Q569G3 176 aa6.45□□□□□ -1.38
DNMT3A-211ENST00000474887 KRTAP3-1Q9BYR8 98 aa6.44□□□□□ -1.38
DNMT3A-211ENST00000474887 FAM236AA0A1B0GUQ0 79 aa6.43□□□□□ -1.38
DNMT3A-211ENST00000474887 FAM236BA0A1B0GV22 79 aa6.43□□□□□ -1.38
DNMT3A-211ENST00000474887 KRTAP6-3Q3LI67 103 aa6.39□□□□□ -1.39
DNMT3A-211ENST00000474887 LCA10Q71F78 164 aa6.38□□□□□ -1.39
DNMT3A-211ENST00000474887 ETDBQ3ZM63 59 aa6.37□□□□□ -1.39
DNMT3A-211ENST00000474887 SPRR2GQ9BYE4 73 aa6.37□□□□□ -1.39
DNMT3A-211ENST00000474887 ACYP1P07311 99 aa6.36□□□□□ -1.39
DNMT3A-211ENST00000474887 CYP4F30PQ9H0H9 118 aa6.36□□□□□ -1.39
DNMT3A-211ENST00000474887 Q5VV11 94 aa6.35□□□□□ -1.39
DNMT3A-211ENST00000474887 LOC101927531A0A1B0GV80 90 aa6.33□□□□□ -1.4
DNMT3A-211ENST00000474887 KRTAP19-8Q3LI54 63 aa6.33□□□□□ -1.4
DNMT3A-211ENST00000474887 TRAV22A0A0B4J277 110 aa6.32□□□□□ -1.4
DNMT3A-211ENST00000474887 KLKP1Q107X0 134 aa6.32□□□□□ -1.4
DNMT3A-211ENST00000474887 CRIPTQ9P021 101 aa6.32□□□□□ -1.4
DNMT3A-211ENST00000474887 ATP5EP2Q5VTU8 51 aa6.31□□□□□ -1.4
DNMT3A-211ENST00000474887 A6NN06 94 aa6.3□□□□□ -1.4
DNMT3A-211ENST00000474887 FAM240AA0A1B0GVK7 77 aa6.29□□□□□ -1.4
DNMT3A-211ENST00000474887 ATOX1O00244 68 aa6.28□□□□□ -1.4
DNMT3A-211ENST00000474887 MT1BP07438 61 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms