RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 SMIM26A0A096LP01 95 aa3.32□□□□□ -1.88
CPSF7-210ENST00000474684 IGLV9-49A0A0B4J1Y8 123 aa3.32□□□□□ -1.88
CPSF7-210ENST00000474684 JMJD7-PLA2G4BH0Y9G9 81 aa3.32□□□□□ -1.88
CPSF7-210ENST00000474684 Q6ZRX8 168 aa3.32□□□□□ -1.88
CPSF7-210ENST00000474684 H7C2G1 150 aa3.31□□□□□ -1.88
CPSF7-210ENST00000474684 IGLV6-57P01721 117 aa3.31□□□□□ -1.88
CPSF7-210ENST00000474684 ADAMTSL4-AS1Q5T5F5 129 aa3.31□□□□□ -1.88
CPSF7-210ENST00000474684 SPAG11AQ6PDA7 123 aa3.31□□□□□ -1.88
CPSF7-210ENST00000474684 FP248Q71RG6 208 aaPredicted RBP3.31□□□□□ -1.88
CPSF7-210ENST00000474684 ST20-AS1Q8NBB2 130 aa3.31□□□□□ -1.88
CPSF7-210ENST00000474684 LITAFQ99732 161 aa3.31□□□□□ -1.88
CPSF7-210ENST00000474684 TRAV23DV6A0A075B6W5 121 aa3.3□□□□□ -1.88
CPSF7-210ENST00000474684 FAM236DA0A1B0GTK5 79 aa3.3□□□□□ -1.88
CPSF7-210ENST00000474684 BAALC-AS2P0C853 105 aa3.3□□□□□ -1.88
CPSF7-210ENST00000474684 FAM236CP0DP71 79 aa3.3□□□□□ -1.88
CPSF7-210ENST00000474684 PDE6GP18545 87 aa3.3□□□□□ -1.88
CPSF7-210ENST00000474684 Q8N377 158 aa3.3□□□□□ -1.88
CPSF7-210ENST00000474684 OBSCN-AS1Q96MR7 158 aa3.3□□□□□ -1.88
CPSF7-210ENST00000474684 KLKP1Q107X0 134 aa3.29□□□□□ -1.88
CPSF7-210ENST00000474684 ASB16-AS1Q495Z4 193 aa3.29□□□□□ -1.88
CPSF7-210ENST00000474684 TRAV7A0A075B6U4 112 aa3.28□□□□□ -1.88
CPSF7-210ENST00000474684 ZNF73O43830 326 aaPredicted RBP3.28□□□□□ -1.88
CPSF7-210ENST00000474684 SPINK1P00995 79 aa3.28□□□□□ -1.88
CPSF7-210ENST00000474684 LINC00308Q8TCZ7 52 aa3.28□□□□□ -1.88
CPSF7-210ENST00000474684 CLEC2BQ92478 149 aa3.28□□□□□ -1.88
CPSF7-210ENST00000474684 UBL5Q9BZL1 73 aa3.28□□□□□ -1.88
CPSF7-210ENST00000474684 V9GYY9 64 aa3.28□□□□□ -1.88
CPSF7-210ENST00000474684 KRTAP10-7P60409 375 aaPredicted RBP3.27□□□□□ -1.89
CPSF7-210ENST00000474684 RPS29P62273 56 aaKnown RBP3.27□□□□□ -1.89
CPSF7-210ENST00000474684 Q5XG85 94 aa3.27□□□□□ -1.89
CPSF7-210ENST00000474684 TMEM256-PLSCR3K7ERE1 68 aa3.26□□□□□ -1.89
CPSF7-210ENST00000474684 CCKP06307 115 aa3.26□□□□□ -1.89
CPSF7-210ENST00000474684 KRTAP19-2Q3LHN2 52 aa3.26□□□□□ -1.89
CPSF7-210ENST00000474684 ORMDL1Q9P0S3 153 aa3.26□□□□□ -1.89
CPSF7-210ENST00000474684 FLGP20930 4061 aaPredicted RBP3.26□□□□□ -1.89
CPSF7-210ENST00000474684 SPRR1BP22528 89 aa3.25□□□□□ -1.89
CPSF7-210ENST00000474684 CXCL6P80162 114 aa3.25□□□□□ -1.89
CPSF7-210ENST00000474684 KRTAP5-11Q6L8G4 156 aa3.25□□□□□ -1.89
CPSF7-210ENST00000474684 HRCT1Q6UXD1 115 aa3.25□□□□□ -1.89
CPSF7-210ENST00000474684 SSBP3-AS1Q7Z2R9 100 aa3.25□□□□□ -1.89
CPSF7-210ENST00000474684 A0A0G2JQZ4 141 aa3.24□□□□□ -1.89
CPSF7-210ENST00000474684 DSCR8Q96T75 97 aa3.24□□□□□ -1.89
CPSF7-210ENST00000474684 C9orf92A6NGG3 77 aa3.23□□□□□ -1.89
CPSF7-210ENST00000474684 ELOF1P60002 83 aaKnown RBP3.23□□□□□ -1.89
CPSF7-210ENST00000474684 SEC61GP60059 68 aa3.23□□□□□ -1.89
CPSF7-210ENST00000474684 SEC61BP60468 96 aaKnown RBP3.23□□□□□ -1.89
CPSF7-210ENST00000474684 C6orf99Q4VX62 202 aa3.23□□□□□ -1.89
CPSF7-210ENST00000474684 C1orf195Q5TG92 126 aa3.23□□□□□ -1.89
CPSF7-210ENST00000474684 FSIP2Q5CZC0 6907 aa3.22□□□□□ -1.89
CPSF7-210ENST00000474684 LOC110117498A0A087WWA1 95 aa3.22□□□□□ -1.89
CPSF7-210ENST00000474684 TRBV7-6A0A0J9YX20 115 aa3.22□□□□□ -1.89
CPSF7-210ENST00000474684 A0A1B0GW54 56 aa3.22□□□□□ -1.89
CPSF7-210ENST00000474684 H7BZZ5 65 aa3.22□□□□□ -1.89
CPSF7-210ENST00000474684 COX7BP24311 80 aa3.22□□□□□ -1.89
CPSF7-210ENST00000474684 LINC01547P58512 204 aaPredicted RBP3.22□□□□□ -1.89
CPSF7-210ENST00000474684 C4orf26Q17RF5 130 aa3.22□□□□□ -1.89
CPSF7-210ENST00000474684 LINC00846Q9NV44 126 aa3.22□□□□□ -1.89
CPSF7-210ENST00000474684 PCOTHQ58A44 107 aa3.21□□□□□ -1.9
CPSF7-210ENST00000474684 SMIM29Q86T20 159 aa3.21□□□□□ -1.9
CPSF7-210ENST00000474684 C20orf197Q8N268 126 aa3.21□□□□□ -1.9
CPSF7-210ENST00000474684 MT1HP80294 61 aa3.2□□□□□ -1.9
CPSF7-210ENST00000474684 PRR15Q8IV56 129 aa3.2□□□□□ -1.9
CPSF7-210ENST00000474684 DEFB105AQ8NG35 78 aa3.2□□□□□ -1.9
CPSF7-210ENST00000474684 LIMD2Q9BT23 127 aa3.2□□□□□ -1.9
CPSF7-210ENST00000474684 C14orf132Q9NPU4 83 aa3.2□□□□□ -1.9
CPSF7-210ENST00000474684 DHRS4-AS1Q9P1J3 65 aa3.2□□□□□ -1.9
CPSF7-210ENST00000474684 IGLV5-48A0A075B6I7 105 aa3.19□□□□□ -1.9
CPSF7-210ENST00000474684 IGKV3D-7A0A0C4DH55 119 aa3.19□□□□□ -1.9
CPSF7-210ENST00000474684 RBM3P98179 157 aaKnown RBP3.19□□□□□ -1.9
CPSF7-210ENST00000474684 IGLV8-61A0A075B6I0 122 aa3.18□□□□□ -1.9
CPSF7-210ENST00000474684 SMIM11BQ8TCY0 68 aa3.18□□□□□ -1.9
CPSF7-210ENST00000474684 CD164Q04900 197 aa3.17□□□□□ -1.9
CPSF7-210ENST00000474684 BRK1Q8WUW1 75 aa3.17□□□□□ -1.9
CPSF7-210ENST00000474684 FAM218AQ96MZ4 157 aa3.17□□□□□ -1.9
CPSF7-210ENST00000474684 A0A087WVE0 104 aa3.16□□□□□ -1.9
CPSF7-210ENST00000474684 TRBV7-4A0A0J9YYF1 115 aa3.16□□□□□ -1.9
CPSF7-210ENST00000474684 F8WEM9 126 aa3.16□□□□□ -1.9
CPSF7-210ENST00000474684 NDUFB1O75438 58 aa3.16□□□□□ -1.9
CPSF7-210ENST00000474684 PMAIP1Q13794 54 aa3.16□□□□□ -1.9
CPSF7-210ENST00000474684 KRTAP10-6P60371 365 aaPredicted RBP3.15□□□□□ -1.91
CPSF7-210ENST00000474684 RPL37P61927 97 aaKnown RBP3.15□□□□□ -1.91
CPSF7-210ENST00000474684 Q6ZQT0 140 aa3.15□□□□□ -1.91
CPSF7-210ENST00000474684 TMEM254Q8TBM7 123 aa3.15□□□□□ -1.91
CPSF7-210ENST00000474684 CYSTM1Q9H1C7 97 aa3.15□□□□□ -1.91
CPSF7-210ENST00000474684 Q1T7F1 81 aa3.14□□□□□ -1.91
CPSF7-210ENST00000474684 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.14□□□□□ -1.91
CPSF7-210ENST00000474684 CRCT1Q9UGL9 99 aa3.14□□□□□ -1.91
CPSF7-210ENST00000474684 NREPQ16612 68 aa3.13□□□□□ -1.91
CPSF7-210ENST00000474684 Q6ZQY7 126 aa3.13□□□□□ -1.91
CPSF7-210ENST00000474684 Q6ZVQ6 151 aa3.13□□□□□ -1.91
CPSF7-210ENST00000474684 BPY2O14599 106 aa3.12□□□□□ -1.91
CPSF7-210ENST00000474684 IGFL1Q6UW32 110 aa3.12□□□□□ -1.91
CPSF7-210ENST00000474684 LINC00575Q6W349 94 aa3.12□□□□□ -1.91
CPSF7-210ENST00000474684 KRTAP23-1A1A580 65 aa3.11□□□□□ -1.91
CPSF7-210ENST00000474684 NDUFS5O43920 106 aa3.11□□□□□ -1.91
CPSF7-210ENST00000474684 CYP4F30PQ9H0H9 118 aa3.11□□□□□ -1.91
CPSF7-210ENST00000474684 H3BPC8 53 aa3.1□□□□□ -1.91
CPSF7-210ENST00000474684 LCE1AQ5T7P2 110 aa3.09□□□□□ -1.91
CPSF7-210ENST00000474684 COX6B2Q6YFQ2 88 aa3.09□□□□□ -1.91
CPSF7-210ENST00000474684 SSPOA2VEC9 5147 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms