RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 LINC00483Q53H64 154 aa11.06□□□□□ -0.64
ECHDC1-214ENST00000474289 STAB2Q8WWQ8 2551 aa11.05□□□□□ -0.64
ECHDC1-214ENST00000474289 ACYP2P14621 99 aa11.05□□□□□ -0.64
ECHDC1-214ENST00000474289 FRAS1Q86XX4 4008 aa11.04□□□□□ -0.64
ECHDC1-214ENST00000474289 DNAH7Q8WXX0 4024 aa11.04□□□□□ -0.64
ECHDC1-214ENST00000474289 UBE2DNLQ8IWF7 75 aa11.03□□□□□ -0.64
ECHDC1-214ENST00000474289 WWC2-AS2Q96NR7 200 aa11.03□□□□□ -0.64
ECHDC1-214ENST00000474289 PLA2G1BP04054 148 aaKnown RBP11.01□□□□□ -0.65
ECHDC1-214ENST00000474289 DNAH8Q96JB1 4490 aa10.98□□□□□ -0.65
ECHDC1-214ENST00000474289 ANAPC11Q9NYG5 84 aa10.98□□□□□ -0.65
ECHDC1-214ENST00000474289 DMAC1Q96GE9 116 aa10.96□□□□□ -0.65
ECHDC1-214ENST00000474289 SPINK6Q6UWN8 80 aa10.96□□□□□ -0.66
ECHDC1-214ENST00000474289 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.95□□□□□ -0.66
ECHDC1-214ENST00000474289 A0A1B0GU69 56 aa10.95□□□□□ -0.66
ECHDC1-214ENST00000474289 APLNQ9ULZ1 77 aa10.95□□□□□ -0.66
ECHDC1-214ENST00000474289 ZNF706Q9Y5V0 76 aaPredicted RBP10.94□□□□□ -0.66
ECHDC1-214ENST00000474289 RTL8CO15255 209 aa10.93□□□□□ -0.66
ECHDC1-214ENST00000474289 SPATA8Q6RVD6 105 aa10.93□□□□□ -0.66
ECHDC1-214ENST00000474289 LINC01554Q52M75 96 aa10.93□□□□□ -0.66
ECHDC1-214ENST00000474289 SPACA4Q8TDM5 124 aa10.92□□□□□ -0.66
ECHDC1-214ENST00000474289 MGAM2Q2M2H8 2515 aa10.91□□□□□ -0.66
ECHDC1-214ENST00000474289 C4orf48Q5BLP8 95 aa10.9□□□□□ -0.66
ECHDC1-214ENST00000474289 PLECQ15149 4684 aaKnown RBP10.87□□□□□ -0.67
ECHDC1-214ENST00000474289 PSORS1C2Q9UIG4 136 aa10.86□□□□□ -0.67
ECHDC1-214ENST00000474289 MIR22HGQ0VDD5 57 aa10.85□□□□□ -0.67
ECHDC1-214ENST00000474289 NBDYA0A0U1RRE5 68 aa10.83□□□□□ -0.68
ECHDC1-214ENST00000474289 Q6ZRN7 208 aaPredicted RBP10.83□□□□□ -0.68
ECHDC1-214ENST00000474289 DYNC2H1Q8NCM8 4307 aaKnown RBP10.83□□□□□ -0.68
ECHDC1-214ENST00000474289 IGLV5-52A0A0A0MRZ9 124 aa10.83□□□□□ -0.68
ECHDC1-214ENST00000474289 UQCR11O14957 56 aa10.82□□□□□ -0.68
ECHDC1-214ENST00000474289 ZNF861PO60384 105 aa10.8□□□□□ -0.68
ECHDC1-214ENST00000474289 HECTD4Q9Y4D8 3996 aa10.8□□□□□ -0.68
ECHDC1-214ENST00000474289 RETNLBQ9BQ08 111 aa10.79□□□□□ -0.68
ECHDC1-214ENST00000474289 CIRBP-AS1Q8TBR5 109 aa10.77□□□□□ -0.69
ECHDC1-214ENST00000474289 FAM229AH3BQW9 127 aa10.76□□□□□ -0.69
ECHDC1-214ENST00000474289 IGKV2-30P06310 120 aa10.76□□□□□ -0.69
ECHDC1-214ENST00000474289 DNAH17Q9UFH2 4485 aa10.73□□□□□ -0.69
ECHDC1-214ENST00000474289 CSAG1Q6PB30 78 aa10.72□□□□□ -0.69
ECHDC1-214ENST00000474289 A0A087WTM6 91 aa10.67□□□□□ -0.7
ECHDC1-214ENST00000474289 VPS13DQ5THJ4 4388 aa10.66□□□□□ -0.7
ECHDC1-214ENST00000474289 H3BS24 57 aa10.66□□□□□ -0.7
ECHDC1-214ENST00000474289 STARD9Q9P2P6 4700 aa10.65□□□□□ -0.7
ECHDC1-214ENST00000474289 MEGF8Q7Z7M0 2845 aa10.63□□□□□ -0.71
ECHDC1-214ENST00000474289 IGLV7-43P04211 117 aa10.6□□□□□ -0.71
ECHDC1-214ENST00000474289 IGKV2D-30A0A075B6S6 120 aa10.59□□□□□ -0.71
ECHDC1-214ENST00000474289 NUPR2A6NF83 97 aa10.59□□□□□ -0.71
ECHDC1-214ENST00000474289 SSBP3-AS1Q7Z2R9 100 aa10.59□□□□□ -0.71
ECHDC1-214ENST00000474289 DNAH2Q9P225 4427 aa10.59□□□□□ -0.71
ECHDC1-214ENST00000474289 FBN3Q75N90 2809 aa10.59□□□□□ -0.71
ECHDC1-214ENST00000474289 KRTAP16-1A8MUX0 517 aa10.57□□□□□ -0.72
ECHDC1-214ENST00000474289 TGP01266 2768 aa10.56□□□□□ -0.72
ECHDC1-214ENST00000474289 KMT2AQ03164 3969 aa10.56□□□□□ -0.72
ECHDC1-214ENST00000474289 PRKDCP78527 4128 aaKnown RBP10.49□□□□□ -0.73
ECHDC1-214ENST00000474289 DNAH11Q96DT5 4516 aa10.49□□□□□ -0.73
ECHDC1-214ENST00000474289 SPINK1P00995 79 aa10.48□□□□□ -0.73
ECHDC1-214ENST00000474289 DNAH6Q9C0G6 4158 aa10.44□□□□□ -0.74
ECHDC1-214ENST00000474289 KRTAP13-2Q52LG2 175 aa10.43□□□□□ -0.74
ECHDC1-214ENST00000474289 A8MUU9 505 aa10.39□□□□□ -0.75
ECHDC1-214ENST00000474289 Q8N1X5 172 aa10.39□□□□□ -0.75
ECHDC1-214ENST00000474289 H0YAA0 97 aa10.39□□□□□ -0.75
ECHDC1-214ENST00000474289 LY6G6CO95867 125 aa10.39□□□□□ -0.75
ECHDC1-214ENST00000474289 Q6ZSA8 131 aa10.38□□□□□ -0.75
ECHDC1-214ENST00000474289 C1orf134Q5TEV5 83 aa10.37□□□□□ -0.75
ECHDC1-214ENST00000474289 KRTAP25-1Q3LHN0 102 aa10.34□□□□□ -0.75
ECHDC1-214ENST00000474289 DNAH5Q8TE73 4624 aa10.34□□□□□ -0.75
ECHDC1-214ENST00000474289 LINC00304Q8N9R0 145 aa10.33□□□□□ -0.76
ECHDC1-214ENST00000474289 TYMSOSQ8TAI1 123 aa10.28□□□□□ -0.76
ECHDC1-214ENST00000474289 LRP1BQ9NZR2 4599 aa10.27□□□□□ -0.77
ECHDC1-214ENST00000474289 KRTAP10-2P60368 255 aa10.26□□□□□ -0.77
ECHDC1-214ENST00000474289 ROMO1P60602 79 aa10.25□□□□□ -0.77
ECHDC1-214ENST00000474289 A0A1B0GU33 70 aa10.21□□□□□ -0.77
ECHDC1-214ENST00000474289 FLG2Q5D862 2391 aaPredicted RBP10.2□□□□□ -0.78
ECHDC1-214ENST00000474289 KRTAP1-4P0C5Y4 121 aa10.2□□□□□ -0.78
ECHDC1-214ENST00000474289 VPS13BQ7Z7G8 4022 aa10.17□□□□□ -0.78
ECHDC1-214ENST00000474289 H1FX-AS1Q4G0G2 97 aa10.15□□□□□ -0.78
ECHDC1-214ENST00000474289 KRTAP10-1P60331 282 aa10.11□□□□□ -0.79
ECHDC1-214ENST00000474289 CRIPTQ9P021 101 aa10.1□□□□□ -0.79
ECHDC1-214ENST00000474289 PKD1P98161 4303 aa10.09□□□□□ -0.79
ECHDC1-214ENST00000474289 KRTAP3-1Q9BYR8 98 aa10.09□□□□□ -0.79
ECHDC1-214ENST00000474289 HYDINQ4G0P3 5121 aa10.02□□□□□ -0.81
ECHDC1-214ENST00000474289 FAT2Q9NYQ8 4349 aa10□□□□□ -0.81
ECHDC1-214ENST00000474289 K7ERS5 55 aa9.99□□□□□ -0.81
ECHDC1-214ENST00000474289 P0C880 135 aa9.99□□□□□ -0.81
ECHDC1-214ENST00000474289 COX6B2Q6YFQ2 88 aa9.96□□□□□ -0.81
ECHDC1-214ENST00000474289 DNHD1Q96M86 4753 aa9.93□□□□□ -0.82
ECHDC1-214ENST00000474289 C9orf92A6NGG3 77 aa9.92□□□□□ -0.82
ECHDC1-214ENST00000474289 C20orf166-AS1Q96NR2 134 aa9.91□□□□□ -0.82
ECHDC1-214ENST00000474289 RPS29P62273 56 aaKnown RBP9.87□□□□□ -0.83
ECHDC1-214ENST00000474289 SACSQ9NZJ4 4579 aa9.8□□□□□ -0.84
ECHDC1-214ENST00000474289 PKHD1P08F94 4074 aa9.79□□□□□ -0.84
ECHDC1-214ENST00000474289 RPL37P61927 97 aaKnown RBP9.77□□□□□ -0.84
ECHDC1-214ENST00000474289 TPRXLQ17RH7 258 aa9.75□□□□□ -0.85
ECHDC1-214ENST00000474289 SPINT4Q6UDR6 99 aa9.73□□□□□ -0.85
ECHDC1-214ENST00000474289 PKHD1L1Q86WI1 4243 aa9.73□□□□□ -0.85
ECHDC1-214ENST00000474289 KRTAP13-4Q3LI77 160 aa9.72□□□□□ -0.85
ECHDC1-214ENST00000474289 KRTAP10-6P60371 365 aaPredicted RBP9.72□□□□□ -0.85
ECHDC1-214ENST00000474289 A0A0D9SG42 100 aa9.7□□□□□ -0.86
ECHDC1-214ENST00000474289 DMBT1Q9UGM3 2413 aaPredicted RBP9.69□□□□□ -0.86
ECHDC1-214ENST00000474289 SMR3BP02814 79 aaPredicted RBP9.68□□□□□ -0.86
ECHDC1-214ENST00000474289 C10orf95Q9H7T3 257 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms