RNA–Protein interactions for RNA: ENST00000474273.5

SSB-210, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-210ENST00000474273 NF1P21359 2839 aa0.5□□□□□ -2.33
SSB-210ENST00000474273 NIPBLQ6KC79 2804 aaeCLIP0.5□□□□□ -2.33
SSB-210ENST00000474273 AKAP9Q99996 3911 aa0.5□□□□□ -2.33
SSB-210ENST00000474273 A0A0D9SG42 100 aa0.5□□□□□ -2.33
SSB-210ENST00000474273 TRBV6-1A0A0K0K1D8 114 aa0.5□□□□□ -2.33
SSB-210ENST00000474273 C7orf77A4D0Y5 90 aa0.5□□□□□ -2.33
SSB-210ENST00000474273 F2Z2F3 143 aa0.5□□□□□ -2.33
SSB-210ENST00000474273 H3BNG1 76 aa0.5□□□□□ -2.33
SSB-210ENST00000474273 M0QY20 66 aa0.5□□□□□ -2.33
SSB-210ENST00000474273 NMBP08949 121 aa0.5□□□□□ -2.33
SSB-210ENST00000474273 ATP5EP56381 51 aaPredicted RBP0.5□□□□□ -2.33
SSB-210ENST00000474273 UBE2D3P61077 147 aa0.5□□□□□ -2.33
SSB-210ENST00000474273 UBE2D2P62837 147 aa0.5□□□□□ -2.33
SSB-210ENST00000474273 COX6A2Q02221 97 aa0.5□□□□□ -2.33
SSB-210ENST00000474273 ADIRFQ15847 76 aa0.5□□□□□ -2.33
SSB-210ENST00000474273 TDRG1Q3Y452 100 aa0.5□□□□□ -2.33
SSB-210ENST00000474273 LELP1Q5T871 98 aa0.5□□□□□ -2.33
SSB-210ENST00000474273 CLPSL2Q6UWE3 100 aa0.5□□□□□ -2.33
SSB-210ENST00000474273 ENHOQ6UWT2 76 aa0.5□□□□□ -2.33
SSB-210ENST00000474273 RPL39LQ96EH5 51 aaKnown RBP0.5□□□□□ -2.33
SSB-210ENST00000474273 C10orf95Q9H7T3 257 aa0.5□□□□□ -2.33
SSB-210ENST00000474273 LINC00472Q9H8W2 130 aa0.5□□□□□ -2.33
SSB-210ENST00000474273 ST20Q9HBF5 79 aa0.5□□□□□ -2.33
SSB-210ENST00000474273 MANBALQ9NQG1 85 aa0.5□□□□□ -2.33
SSB-210ENST00000474273 CMYA5Q8N3K9 4069 aa0.5□□□□□ -2.33
SSB-210ENST00000474273 MXRA5Q9NR99 2828 aa0.5□□□□□ -2.33
SSB-210ENST00000474273 LAMA5O15230 3695 aa0.49□□□□□ -2.33
SSB-210ENST00000474273 CSMD1Q96PZ7 3565 aa0.49□□□□□ -2.33
SSB-210ENST00000474273 TRBV25-1A0A075B6N4 114 aa0.49□□□□□ -2.33
SSB-210ENST00000474273 LINC00959A0A1B0GUT2 108 aa0.49□□□□□ -2.33
SSB-210ENST00000474273 A0A1B0GUT8 65 aa0.49□□□□□ -2.33
SSB-210ENST00000474273 SMIM27A0A1W2PRY6 76 aa0.49□□□□□ -2.33
SSB-210ENST00000474273 CHKB-CPT1BH3BT56 60 aa0.49□□□□□ -2.33
SSB-210ENST00000474273 I3L3M4 83 aa0.49□□□□□ -2.33
SSB-210ENST00000474273 APOC3P02656 99 aa0.49□□□□□ -2.33
SSB-210ENST00000474273 FCER1GP30273 86 aa0.49□□□□□ -2.33
SSB-210ENST00000474273 IFI27P40305 119 aaPredicted RBP0.49□□□□□ -2.33
SSB-210ENST00000474273 POLR2KP53803 58 aaKnown RBP0.49□□□□□ -2.33
SSB-210ENST00000474273 RPL39P62891 51 aaKnown RBP0.49□□□□□ -2.33
SSB-210ENST00000474273 WFDC2Q14508 124 aa0.49□□□□□ -2.33
SSB-210ENST00000474273 LINC01556Q5JQF7 62 aa0.49□□□□□ -2.33
SSB-210ENST00000474273 COL5A1-AS1Q5SY13 56 aa0.49□□□□□ -2.33
SSB-210ENST00000474273 SFTA2Q6UW10 78 aa0.49□□□□□ -2.33
SSB-210ENST00000474273 KRTAP19-3Q7Z4W3 81 aa0.49□□□□□ -2.33
SSB-210ENST00000474273 TOMM7Q9P0U1 55 aa0.49□□□□□ -2.33
SSB-210ENST00000474273 CSMD2Q7Z408 3487 aa0.49□□□□□ -2.33
SSB-210ENST00000474273 VPS13DQ5THJ4 4388 aa0.48□□□□□ -2.33
SSB-210ENST00000474273 DYNC2H1Q8NCM8 4307 aaKnown RBP0.48□□□□□ -2.33
SSB-210ENST00000474273 NBEAL2Q6ZNJ1 2754 aa0.48□□□□□ -2.33
SSB-210ENST00000474273 A0A087WWC5 75 aa0.48□□□□□ -2.33
SSB-210ENST00000474273 D6R8Y8 96 aa0.48□□□□□ -2.33
SSB-210ENST00000474273 ACYP2P14621 99 aa0.48□□□□□ -2.33
SSB-210ENST00000474273 SPAG11BQ08648 103 aa0.48□□□□□ -2.33
SSB-210ENST00000474273 PMCHL1Q16048 86 aa0.48□□□□□ -2.33
SSB-210ENST00000474273 SPAG11AQ6PDA7 123 aa0.48□□□□□ -2.33
SSB-210ENST00000474273 BAGE3Q86Y29 109 aa0.48□□□□□ -2.33
SSB-210ENST00000474273 SMCO4Q9NRQ5 59 aa0.48□□□□□ -2.33
SSB-210ENST00000474273 DNAH3Q8TD57 4116 aa0.48□□□□□ -2.33
SSB-210ENST00000474273 DMBT1Q9UGM3 2413 aaPredicted RBP0.48□□□□□ -2.33
SSB-210ENST00000474273 PKD1L1Q8TDX9 2849 aa0.48□□□□□ -2.33
SSB-210ENST00000474273 MDN1Q9NU22 5596 aa0.48□□□□□ -2.33
SSB-210ENST00000474273 MUC5ACP98088 5654 aa0.48□□□□□ -2.33
SSB-210ENST00000474273 HYDINQ4G0P3 5121 aa0.48□□□□□ -2.33
SSB-210ENST00000474273 COL7A1Q02388 2944 aa0.48□□□□□ -2.33
SSB-210ENST00000474273 ZFHX3Q15911 3703 aa0.47□□□□□ -2.33
SSB-210ENST00000474273 NBEAL1Q6ZS30 2694 aa0.47□□□□□ -2.33
SSB-210ENST00000474273 A0A096LNI7 61 aa0.47□□□□□ -2.33
SSB-210ENST00000474273 IGIPA6NJ69 53 aa0.47□□□□□ -2.33
SSB-210ENST00000474273 H7BZZ5 65 aa0.47□□□□□ -2.33
SSB-210ENST00000474273 LINC00158P58513 81 aa0.47□□□□□ -2.33
SSB-210ENST00000474273 SEC11AP67812 179 aa0.47□□□□□ -2.33
SSB-210ENST00000474273 TMEM170BQ5T4T1 132 aa0.47□□□□□ -2.33
SSB-210ENST00000474273 Q5VSD8 79 aa0.47□□□□□ -2.33
SSB-210ENST00000474273 Q6ZRX8 168 aa0.47□□□□□ -2.33
SSB-210ENST00000474273 C18orf32Q8TCD1 76 aa0.47□□□□□ -2.33
SSB-210ENST00000474273 PMCHL2Q9BQD1 86 aa0.47□□□□□ -2.33
SSB-210ENST00000474273 C20orf78Q9BR46 151 aa0.47□□□□□ -2.33
SSB-210ENST00000474273 SMIM2Q9BVW6 85 aa0.47□□□□□ -2.33
SSB-210ENST00000474273 NXT2Q9NPJ8 142 aaKnown RBP0.47□□□□□ -2.33
SSB-210ENST00000474273 CDKN2A-AS1Q9UH64 79 aa0.47□□□□□ -2.33
SSB-210ENST00000474273 UBE2D4Q9Y2X8 147 aa0.47□□□□□ -2.33
SSB-210ENST00000474273 LINC01558Q9Y6Z2 57 aa0.47□□□□□ -2.33
SSB-210ENST00000474273 VWFP04275 2813 aa0.47□□□□□ -2.33
SSB-210ENST00000474273 CUBNO60494 3623 aa0.46□□□□□ -2.34
SSB-210ENST00000474273 TGP01266 2768 aa0.46□□□□□ -2.34
SSB-210ENST00000474273 SMG1Q96Q15 3661 aaKnown RBP0.46□□□□□ -2.34
SSB-210ENST00000474273 DNAH6Q9C0G6 4158 aa0.46□□□□□ -2.34
SSB-210ENST00000474273 DNAH2Q9P225 4427 aa0.46□□□□□ -2.34
SSB-210ENST00000474273 PRKDCP78527 4128 aaKnown RBP0.46□□□□□ -2.34
SSB-210ENST00000474273 LINC01546A6NGU7 62 aa0.46□□□□□ -2.34
SSB-210ENST00000474273 F8VRH5 84 aa0.46□□□□□ -2.34
SSB-210ENST00000474273 NDUFA1O15239 70 aa0.46□□□□□ -2.34
SSB-210ENST00000474273 LEPROTL1O95214 131 aa0.46□□□□□ -2.34
SSB-210ENST00000474273 C3orf79P0CE67 100 aa0.46□□□□□ -2.34
SSB-210ENST00000474273 SMIM13P0DJ93 91 aa0.46□□□□□ -2.34
SSB-210ENST00000474273 KRTDAPP60985 99 aa0.46□□□□□ -2.34
SSB-210ENST00000474273 MUSTN1Q8IVN3 82 aa0.46□□□□□ -2.34
SSB-210ENST00000474273 DEFB105AQ8NG35 78 aa0.46□□□□□ -2.34
SSB-210ENST00000474273 SMIM11BQ8TCY0 68 aa0.46□□□□□ -2.34
SSB-210ENST00000474273 VAMP8Q9BV40 100 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms