RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 MUC6Q6W4X9 2439 aa1.41□□□□□ -2.18
TMEM50B-208ENST00000474272 UQCR11O14957 56 aa1.41□□□□□ -2.18
TMEM50B-208ENST00000474272 MIR22HGQ0VDD5 57 aa1.41□□□□□ -2.18
TMEM50B-208ENST00000474272 LINC00472Q9H8W2 130 aa1.41□□□□□ -2.18
TMEM50B-208ENST00000474272 AKAP6Q13023 2319 aa1.41□□□□□ -2.18
TMEM50B-208ENST00000474272 CSPG4Q6UVK1 2322 aa1.41□□□□□ -2.18
TMEM50B-208ENST00000474272 VPS13CQ709C8 3753 aa1.41□□□□□ -2.18
TMEM50B-208ENST00000474272 A0A087WSZ3 146 aa1.4□□□□□ -2.19
TMEM50B-208ENST00000474272 K7EQZ3 153 aa1.4□□□□□ -2.19
TMEM50B-208ENST00000474272 C9orf163Q8N9P6 203 aa1.4□□□□□ -2.19
TMEM50B-208ENST00000474272 LINC01558Q9Y6Z2 57 aa1.4□□□□□ -2.19
TMEM50B-208ENST00000474272 FBN2P35556 2912 aa1.4□□□□□ -2.19
TMEM50B-208ENST00000474272 MXRA5Q9NR99 2828 aa1.4□□□□□ -2.19
TMEM50B-208ENST00000474272 CEP295Q9C0D2 2601 aa1.4□□□□□ -2.19
TMEM50B-208ENST00000474272 DNAH1Q9P2D7 4330 aa1.4□□□□□ -2.19
TMEM50B-208ENST00000474272 SMR3AQ99954 134 aa1.39□□□□□ -2.19
TMEM50B-208ENST00000474272 SPG11Q96JI7 2443 aa1.39□□□□□ -2.19
TMEM50B-208ENST00000474272 TEX15Q9BXT5 2789 aa1.39□□□□□ -2.19
TMEM50B-208ENST00000474272 CELSR2Q9HCU4 2923 aa1.39□□□□□ -2.19
TMEM50B-208ENST00000474272 KMT2BQ9UMN6 2715 aaPredicted RBP1.38□□□□□ -2.19
TMEM50B-208ENST00000474272 NBPF19A0A087WUL8 3843 aa1.38□□□□□ -2.19
TMEM50B-208ENST00000474272 UBR5O95071 2799 aaPredicted RBP1.38□□□□□ -2.19
TMEM50B-208ENST00000474272 ITPR1Q14643 2758 aa1.38□□□□□ -2.19
TMEM50B-208ENST00000474272 KRTAP12-1P59990 96 aa1.38□□□□□ -2.19
TMEM50B-208ENST00000474272 CSAG1Q6PB30 78 aa1.38□□□□□ -2.19
TMEM50B-208ENST00000474272 COA5Q86WW8 74 aa1.38□□□□□ -2.19
TMEM50B-208ENST00000474272 NBASA2RRP1 2371 aa1.38□□□□□ -2.19
TMEM50B-208ENST00000474272 BAHCC1Q9P281 2608 aa1.38□□□□□ -2.19
TMEM50B-208ENST00000474272 USP9YO00507 2555 aaPredicted RBP1.38□□□□□ -2.19
TMEM50B-208ENST00000474272 USP9XQ93008 2570 aaPredicted RBP1.38□□□□□ -2.19
TMEM50B-208ENST00000474272 IGF2RP11717 2491 aa1.38□□□□□ -2.19
TMEM50B-208ENST00000474272 NAV2Q8IVL1 2488 aa1.38□□□□□ -2.19
TMEM50B-208ENST00000474272 UTP20O75691 2785 aaKnown RBP1.37□□□□□ -2.19
TMEM50B-208ENST00000474272 CSMD2Q7Z408 3487 aa1.37□□□□□ -2.19
TMEM50B-208ENST00000474272 CRYBG3Q68DQ2 2970 aa1.37□□□□□ -2.19
TMEM50B-208ENST00000474272 NUPR2A6NF83 97 aa1.37□□□□□ -2.19
TMEM50B-208ENST00000474272 SSBP3-AS1Q7Z2R9 100 aa1.37□□□□□ -2.19
TMEM50B-208ENST00000474272 PLAC8Q9NZF1 115 aa1.37□□□□□ -2.19
TMEM50B-208ENST00000474272 APLNQ9ULZ1 77 aa1.37□□□□□ -2.19
TMEM50B-208ENST00000474272 PDZD2O15018 2839 aa1.37□□□□□ -2.19
TMEM50B-208ENST00000474272 CFAP46Q8IYW2 2715 aa1.37□□□□□ -2.19
TMEM50B-208ENST00000474272 CHD6Q8TD26 2715 aa1.37□□□□□ -2.19
TMEM50B-208ENST00000474272 CACNA1AO00555 2505 aa1.36□□□□□ -2.19
TMEM50B-208ENST00000474272 A0A096LNI7 61 aa1.36□□□□□ -2.19
TMEM50B-208ENST00000474272 MMP24-AS1A0A0U1RRL7 71 aa1.36□□□□□ -2.19
TMEM50B-208ENST00000474272 A0A1B0GU69 56 aa1.36□□□□□ -2.19
TMEM50B-208ENST00000474272 WFDC13Q8IUB5 93 aa1.36□□□□□ -2.19
TMEM50B-208ENST00000474272 Q96NJ1 140 aa1.36□□□□□ -2.19
TMEM50B-208ENST00000474272 MRPL34Q9BQ48 92 aaKnown RBP1.36□□□□□ -2.19
TMEM50B-208ENST00000474272 PKD1L2Q7Z442 2459 aa1.35□□□□□ -2.19
TMEM50B-208ENST00000474272 APCP25054 2843 aa1.35□□□□□ -2.19
TMEM50B-208ENST00000474272 MAP1AP78559 2803 aaPredicted RBP1.35□□□□□ -2.19
TMEM50B-208ENST00000474272 C2CD3Q4AC94 2353 aa1.35□□□□□ -2.19
TMEM50B-208ENST00000474272 WNK1Q9H4A3 2382 aa1.35□□□□□ -2.19
TMEM50B-208ENST00000474272 IGSF10Q6WRI0 2623 aa1.35□□□□□ -2.19
TMEM50B-208ENST00000474272 ACYP2P14621 99 aa1.35□□□□□ -2.19
TMEM50B-208ENST00000474272 PRLHP81277 87 aa1.35□□□□□ -2.19
TMEM50B-208ENST00000474272 NCOR2Q9Y618 2525 aa1.35□□□□□ -2.19
TMEM50B-208ENST00000474272 ZNF469Q96JG9 3925 aaPredicted RBP1.35□□□□□ -2.19
TMEM50B-208ENST00000474272 ZANQ9Y493 2812 aa1.34□□□□□ -2.19
TMEM50B-208ENST00000474272 AKAP9Q99996 3911 aa1.34□□□□□ -2.19
TMEM50B-208ENST00000474272 ACACBO00763 2458 aa1.34□□□□□ -2.19
TMEM50B-208ENST00000474272 PIEZO1Q92508 2521 aa1.34□□□□□ -2.19
TMEM50B-208ENST00000474272 FLNCQ14315 2725 aa1.34□□□□□ -2.19
TMEM50B-208ENST00000474272 ANKRD17O75179 2603 aaKnown RBP1.34□□□□□ -2.19
TMEM50B-208ENST00000474272 HUWE1Q7Z6Z7 4374 aaKnown RBP1.34□□□□□ -2.19
TMEM50B-208ENST00000474272 NBDYA0A0U1RRE5 68 aa1.34□□□□□ -2.19
TMEM50B-208ENST00000474272 K7EIL1 84 aa1.34□□□□□ -2.19
TMEM50B-208ENST00000474272 PCOTHQ58A44 107 aa1.34□□□□□ -2.19
TMEM50B-208ENST00000474272 PSORS1C2Q9UIG4 136 aa1.34□□□□□ -2.19
TMEM50B-208ENST00000474272 ZNF462Q96JM2 2506 aa1.34□□□□□ -2.2
TMEM50B-208ENST00000474272 PTPN13Q12923 2485 aa1.33□□□□□ -2.2
TMEM50B-208ENST00000474272 TLN2Q9Y4G6 2542 aa1.33□□□□□ -2.2
TMEM50B-208ENST00000474272 CUBNO60494 3623 aa1.33□□□□□ -2.2
TMEM50B-208ENST00000474272 A0A0G2JQZ4 141 aa1.33□□□□□ -2.2
TMEM50B-208ENST00000474272 Q6ZRN7 208 aaPredicted RBP1.33□□□□□ -2.2
TMEM50B-208ENST00000474272 UBE2DNLQ8IWF7 75 aa1.33□□□□□ -2.2
TMEM50B-208ENST00000474272 SPACA4Q8TDM5 124 aa1.33□□□□□ -2.2
TMEM50B-208ENST00000474272 SETXQ7Z333 2677 aaKnown RBP1.33□□□□□ -2.2
TMEM50B-208ENST00000474272 MYO9AB2RTY4 2548 aa1.32□□□□□ -2.2
TMEM50B-208ENST00000474272 EPG5Q9HCE0 2579 aa1.32□□□□□ -2.2
TMEM50B-208ENST00000474272 ITPR3Q14573 2671 aa1.32□□□□□ -2.2
TMEM50B-208ENST00000474272 A0A087WTM6 91 aa1.32□□□□□ -2.2
TMEM50B-208ENST00000474272 SPINK7P58062 85 aa1.32□□□□□ -2.2
TMEM50B-208ENST00000474272 SPATA8Q6RVD6 105 aa1.32□□□□□ -2.2
TMEM50B-208ENST00000474272 DNAH8Q96JB1 4490 aa1.32□□□□□ -2.2
TMEM50B-208ENST00000474272 DNAH9Q9NYC9 4486 aa1.32□□□□□ -2.2
TMEM50B-208ENST00000474272 NF1P21359 2839 aa1.32□□□□□ -2.2
TMEM50B-208ENST00000474272 SPTBN4Q9H254 2564 aa1.32□□□□□ -2.2
TMEM50B-208ENST00000474272 CHD8Q9HCK8 2581 aa1.32□□□□□ -2.2
TMEM50B-208ENST00000474272 DYNC2H1Q8NCM8 4307 aaKnown RBP1.31□□□□□ -2.2
TMEM50B-208ENST00000474272 NBEAL2Q6ZNJ1 2754 aa1.31□□□□□ -2.2
TMEM50B-208ENST00000474272 NIPBLQ6KC79 2804 aaeCLIP1.31□□□□□ -2.2
TMEM50B-208ENST00000474272 POLQO75417 2590 aa1.31□□□□□ -2.2
TMEM50B-208ENST00000474272 MYO18BQ8IUG5 2567 aa1.31□□□□□ -2.2
TMEM50B-208ENST00000474272 DNAH10Q8IVF4 4471 aa1.31□□□□□ -2.2
TMEM50B-208ENST00000474272 FAM208BQ5VWN6 2430 aa1.31□□□□□ -2.2
TMEM50B-208ENST00000474272 ZFYVE26Q68DK2 2539 aa1.3□□□□□ -2.2
TMEM50B-208ENST00000474272 KRTAP13-4Q3LI77 160 aa1.3□□□□□ -2.2
TMEM50B-208ENST00000474272 VPS13DQ5THJ4 4388 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms