RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 KRTAP20-1Q3LI63 56 aa-1.92□□□□□ -2.72
RBM39-228ENST00000471635 CDC42BPAQ5VT25 1732 aa-1.92□□□□□ -2.72
RBM39-228ENST00000471635 SPENQ96T58 3664 aaKnown RBP-1.92□□□□□ -2.72
RBM39-228ENST00000471635 SNHG12Q9BXW3 62 aa-1.93□□□□□ -2.72
RBM39-228ENST00000471635 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.94□□□□□ -2.72
RBM39-228ENST00000471635 CDC42BPGQ6DT37 1551 aa-1.94□□□□□ -2.72
RBM39-228ENST00000471635 ARFGEF2Q9Y6D5 1785 aa-1.95□□□□□ -2.72
RBM39-228ENST00000471635 CEBPZOSA8MTT3 80 aa-1.95□□□□□ -2.72
RBM39-228ENST00000471635 RABAC1Q9UI14 185 aa-1.95□□□□□ -2.72
RBM39-228ENST00000471635 AKAP12Q02952 1782 aa-1.95□□□□□ -2.72
RBM39-228ENST00000471635 URB2Q14146 1524 aaKnown RBP-1.96□□□□□ -2.72
RBM39-228ENST00000471635 DDX60LQ5H9U9 1706 aaKnown RBP-1.96□□□□□ -2.72
RBM39-228ENST00000471635 LINC00643Q86TS7 51 aa-1.97□□□□□ -2.72
RBM39-228ENST00000471635 IFI27P40305 119 aaPredicted RBP-1.98□□□□□ -2.73
RBM39-228ENST00000471635 SNRPFP62306 86 aaKnown RBP-1.98□□□□□ -2.73
RBM39-228ENST00000471635 ANKRD36CQ5JPF3 1778 aa-1.98□□□□□ -2.73
RBM39-228ENST00000471635 VPS8Q8N3P4 1428 aa-1.99□□□□□ -2.73
RBM39-228ENST00000471635 DMXL2Q8TDJ6 3036 aa-1.99□□□□□ -2.73
RBM39-228ENST00000471635 UMAD1C9J7I0 102 aa-1.99□□□□□ -2.73
RBM39-228ENST00000471635 ADGRG4Q8IZF6 3080 aa-1.99□□□□□ -2.73
RBM39-228ENST00000471635 PEG3Q9GZU2 1588 aa-1.99□□□□□ -2.73
RBM39-228ENST00000471635 CCDC88BA6NC98 1476 aa-2□□□□□ -2.73
RBM39-228ENST00000471635 ITPR2Q14571 2701 aa-2□□□□□ -2.73
RBM39-228ENST00000471635 IGLV5-48A0A075B6I7 105 aa-2□□□□□ -2.73
RBM39-228ENST00000471635 NDUFA4O00483 81 aa-2□□□□□ -2.73
RBM39-228ENST00000471635 PLCH1Q4KWH8 1693 aa-2.01□□□□□ -2.73
RBM39-228ENST00000471635 PIK3C2BO00750 1634 aa-2.02□□□□□ -2.73
RBM39-228ENST00000471635 PKIAP61925 76 aa-2.02□□□□□ -2.73
RBM39-228ENST00000471635 PYY3Q5JQD4 70 aa-2.02□□□□□ -2.73
RBM39-228ENST00000471635 TLN1Q9Y490 2541 aaKnown RBP-2.03□□□□□ -2.73
RBM39-228ENST00000471635 MGAQ8IWI9 3026 aa-2.03□□□□□ -2.73
RBM39-228ENST00000471635 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-2.03□□□□□ -2.73
RBM39-228ENST00000471635 ITSN1Q15811 1721 aa-2.03□□□□□ -2.73
RBM39-228ENST00000471635 TOGARAM1Q9Y4F4 1720 aa-2.03□□□□□ -2.73
RBM39-228ENST00000471635 CCNB3Q8WWL7 1395 aa-2.04□□□□□ -2.74
RBM39-228ENST00000471635 S100A16Q96FQ6 103 aaKnown RBP-2.04□□□□□ -2.74
RBM39-228ENST00000471635 PARP4Q9UKK3 1724 aaKnown RBP-2.05□□□□□ -2.74
RBM39-228ENST00000471635 DEFB131BA0A096LNP1 70 aa-2.06□□□□□ -2.74
RBM39-228ENST00000471635 S100A8P05109 93 aa-2.06□□□□□ -2.74
RBM39-228ENST00000471635 WT1-ASQ06250 92 aa-2.06□□□□□ -2.74
RBM39-228ENST00000471635 NREPQ16612 68 aa-2.06□□□□□ -2.74
RBM39-228ENST00000471635 ITSN2Q9NZM3 1697 aa-2.06□□□□□ -2.74
RBM39-228ENST00000471635 ATMQ13315 3056 aa-2.06□□□□□ -2.74
RBM39-228ENST00000471635 ZC3H13Q5T200 1668 aaKnown RBP-2.07□□□□□ -2.74
RBM39-228ENST00000471635 KIF14Q15058 1648 aa-2.07□□□□□ -2.74
RBM39-228ENST00000471635 THOC2Q8NI27 1593 aaKnown RBP-2.07□□□□□ -2.74
RBM39-228ENST00000471635 CSMD2Q7Z408 3487 aa-2.08□□□□□ -2.74
RBM39-228ENST00000471635 MAP3K4Q9Y6R4 1608 aa-2.08□□□□□ -2.74
RBM39-228ENST00000471635 LINC01546A6NGU7 62 aa-2.08□□□□□ -2.74
RBM39-228ENST00000471635 NOP10Q9NPE3 64 aaKnown RBP-2.08□□□□□ -2.74
RBM39-228ENST00000471635 DEFB4AO15263 64 aa-2.09□□□□□ -2.74
RBM39-228ENST00000471635 ABCC3O15438 1527 aa-2.09□□□□□ -2.74
RBM39-228ENST00000471635 RICTORQ6R327 1708 aa-2.09□□□□□ -2.74
RBM39-228ENST00000471635 KIAA0586Q9BVV6 1533 aa-2.1□□□□□ -2.75
RBM39-228ENST00000471635 TJP1Q07157 1748 aa-2.11□□□□□ -2.75
RBM39-228ENST00000471635 RPS27P42677 84 aaKnown RBP-2.11□□□□□ -2.75
RBM39-228ENST00000471635 BVES-AS1Q5T3Y7 98 aa-2.11□□□□□ -2.75
RBM39-228ENST00000471635 RPS27LQ71UM5 84 aaKnown RBP-2.11□□□□□ -2.75
RBM39-228ENST00000471635 CFAP43Q8NDM7 1665 aa-2.12□□□□□ -2.75
RBM39-228ENST00000471635 PPLO60437 1756 aa-2.13□□□□□ -2.75
RBM39-228ENST00000471635 MAST1Q9Y2H9 1570 aa-2.13□□□□□ -2.75
RBM39-228ENST00000471635 Q9H521 79 aa-2.13□□□□□ -2.75
RBM39-228ENST00000471635 H3BUA1 57 aa-2.14□□□□□ -2.75
RBM39-228ENST00000471635 MRPL33O75394 65 aaKnown RBP-2.14□□□□□ -2.75
RBM39-228ENST00000471635 ATP5EP2Q5VTU8 51 aa-2.14□□□□□ -2.75
RBM39-228ENST00000471635 RNF17Q9BXT8 1623 aaKnown RBP-2.14□□□□□ -2.75
RBM39-228ENST00000471635 PVALEFA0A1B0GWK0 134 aa-2.15□□□□□ -2.75
RBM39-228ENST00000471635 CRIP1P50238 77 aa-2.15□□□□□ -2.75
RBM39-228ENST00000471635 LY75O60449 1722 aa-2.15□□□□□ -2.75
RBM39-228ENST00000471635 ARHGAP35Q9NRY4 1499 aa-2.15□□□□□ -2.75
RBM39-228ENST00000471635 KIF1AQ12756 1690 aa-2.15□□□□□ -2.75
RBM39-228ENST00000471635 BOD1L1Q8NFC6 3051 aa-2.16□□□□□ -2.75
RBM39-228ENST00000471635 FREM2Q5SZK8 3169 aa-2.16□□□□□ -2.75
RBM39-228ENST00000471635 M0QZ58 72 aa-2.16□□□□□ -2.76
RBM39-228ENST00000471635 KCNQ1DNQ9H478 68 aa-2.16□□□□□ -2.76
RBM39-228ENST00000471635 V9GYS6 101 aa-2.16□□□□□ -2.76
RBM39-228ENST00000471635 KANTRA0A1W2PQU2 76 aa-2.17□□□□□ -2.76
RBM39-228ENST00000471635 SPART-AS1P0CW21 52 aa-2.17□□□□□ -2.76
RBM39-228ENST00000471635 TDRG1Q3Y452 100 aa-2.17□□□□□ -2.76
RBM39-228ENST00000471635 HFM1A2PYH4 1435 aa-2.17□□□□□ -2.76
RBM39-228ENST00000471635 HMGA1P17096 107 aaKnown RBP-2.18□□□□□ -2.76
RBM39-228ENST00000471635 TTC37Q6PGP7 1564 aa-2.19□□□□□ -2.76
RBM39-228ENST00000471635 A0A087WXM4 84 aa-2.19□□□□□ -2.76
RBM39-228ENST00000471635 NRAPQ86VF7 1730 aa-2.2□□□□□ -2.76
RBM39-228ENST00000471635 M0QY20 66 aa-2.2□□□□□ -2.76
RBM39-228ENST00000471635 SMIM13P0DJ93 91 aa-2.2□□□□□ -2.76
RBM39-228ENST00000471635 DEFB121Q5J5C9 76 aa-2.2□□□□□ -2.76
RBM39-228ENST00000471635 UBL5Q9BZL1 73 aa-2.2□□□□□ -2.76
RBM39-228ENST00000471635 INO80Q9ULG1 1556 aaPredicted RBP-2.2□□□□□ -2.76
RBM39-228ENST00000471635 MINOS1Q5TGZ0 78 aa-2.21□□□□□ -2.76
RBM39-228ENST00000471635 KDM5DQ9BY66 1539 aa-2.22□□□□□ -2.76
RBM39-228ENST00000471635 NCBP2-AS2Q69YL0 99 aa-2.22□□□□□ -2.76
RBM39-228ENST00000471635 PRUNE2Q8WUY3 3088 aa-2.22□□□□□ -2.77
RBM39-228ENST00000471635 LRRIQ1Q96JM4 1722 aa-2.22□□□□□ -2.77
RBM39-228ENST00000471635 ZFHX4Q86UP3 3567 aa-2.23□□□□□ -2.77
RBM39-228ENST00000471635 SMARCA2P51531 1590 aa-2.23□□□□□ -2.77
RBM39-228ENST00000471635 MT1FP04733 61 aa-2.23□□□□□ -2.77
RBM39-228ENST00000471635 RPS29P62273 56 aaKnown RBP-2.23□□□□□ -2.77
RBM39-228ENST00000471635 KRTAP19-6Q3LI70 58 aa-2.23□□□□□ -2.77
RBM39-228ENST00000471635 RALGAPBQ86X10 1494 aa-2.23□□□□□ -2.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms