RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 ASB16-AS1Q495Z4 193 aa3.54□□□□□ -1.84
SMNDC1-204ENST00000471297 Q5XG85 94 aa3.54□□□□□ -1.84
SMNDC1-204ENST00000471297 SPAG11AQ6PDA7 123 aa3.54□□□□□ -1.84
SMNDC1-204ENST00000471297 FAM236AA0A1B0GUQ0 79 aa3.53□□□□□ -1.84
SMNDC1-204ENST00000471297 FAM236BA0A1B0GV22 79 aa3.53□□□□□ -1.84
SMNDC1-204ENST00000471297 NDUFB1O75438 58 aa3.53□□□□□ -1.84
SMNDC1-204ENST00000471297 IGKV4-1P06312 121 aa3.53□□□□□ -1.84
SMNDC1-204ENST00000471297 DSCR10P59022 87 aa3.53□□□□□ -1.84
SMNDC1-204ENST00000471297 Q5VSD8 79 aa3.53□□□□□ -1.84
SMNDC1-204ENST00000471297 LIMD2Q9BT23 127 aa3.53□□□□□ -1.84
SMNDC1-204ENST00000471297 A0A087WVE0 104 aa3.52□□□□□ -1.85
SMNDC1-204ENST00000471297 A8MWP4 228 aa3.52□□□□□ -1.85
SMNDC1-204ENST00000471297 ATOX1O00244 68 aa3.52□□□□□ -1.85
SMNDC1-204ENST00000471297 SPINK1P00995 79 aa3.52□□□□□ -1.85
SMNDC1-204ENST00000471297 RPS29P62273 56 aaKnown RBP3.52□□□□□ -1.85
SMNDC1-204ENST00000471297 PKD1P98161 4303 aa3.51□□□□□ -1.85
SMNDC1-204ENST00000471297 DEFB116Q30KQ4 102 aa3.51□□□□□ -1.85
SMNDC1-204ENST00000471297 PRR15Q8IV56 129 aa3.51□□□□□ -1.85
SMNDC1-204ENST00000471297 Q96NJ1 140 aa3.51□□□□□ -1.85
SMNDC1-204ENST00000471297 RYR2Q92736 4967 aa3.51□□□□□ -1.85
SMNDC1-204ENST00000471297 SMIM20Q8N5G0 67 aa3.5□□□□□ -1.85
SMNDC1-204ENST00000471297 Q8N9L7 120 aa3.5□□□□□ -1.85
SMNDC1-204ENST00000471297 LINC00304Q8N9R0 145 aa3.5□□□□□ -1.85
SMNDC1-204ENST00000471297 ANAPC13Q9BS18 74 aa3.5□□□□□ -1.85
SMNDC1-204ENST00000471297 DNAH11Q96DT5 4516 aa3.49□□□□□ -1.85
SMNDC1-204ENST00000471297 FAT2Q9NYQ8 4349 aa3.49□□□□□ -1.85
SMNDC1-204ENST00000471297 K7EQZ3 153 aa3.49□□□□□ -1.85
SMNDC1-204ENST00000471297 DNAH8Q96JB1 4490 aa3.48□□□□□ -1.85
SMNDC1-204ENST00000471297 HCG22E2RYF7 251 aa3.48□□□□□ -1.85
SMNDC1-204ENST00000471297 NOTCH2NLQ7Z3S9 236 aa3.48□□□□□ -1.85
SMNDC1-204ENST00000471297 SACSQ9NZJ4 4579 aa3.48□□□□□ -1.85
SMNDC1-204ENST00000471297 DNAH5Q8TE73 4624 aa3.48□□□□□ -1.85
SMNDC1-204ENST00000471297 A0A1B0GVX0 72 aa3.47□□□□□ -1.85
SMNDC1-204ENST00000471297 C1orf195Q5TG92 126 aa3.47□□□□□ -1.85
SMNDC1-204ENST00000471297 TRAV7A0A075B6U4 112 aa3.46□□□□□ -1.86
SMNDC1-204ENST00000471297 C8orf87E5RJ46 101 aa3.46□□□□□ -1.86
SMNDC1-204ENST00000471297 COX7CP15954 63 aa3.46□□□□□ -1.86
SMNDC1-204ENST00000471297 KRTAP10-8P60410 259 aa3.46□□□□□ -1.86
SMNDC1-204ENST00000471297 CASC2Q6XLA1 102 aa3.46□□□□□ -1.86
SMNDC1-204ENST00000471297 SERP2Q8N6R1 65 aa3.46□□□□□ -1.86
SMNDC1-204ENST00000471297 C8orf17Q9NRJ1 99 aa3.46□□□□□ -1.86
SMNDC1-204ENST00000471297 IGHV6-1A0A0B4J1U7 121 aa3.45□□□□□ -1.86
SMNDC1-204ENST00000471297 MMP24-AS1A0A0U1RRL7 71 aa3.45□□□□□ -1.86
SMNDC1-204ENST00000471297 hDV103S1A0JD37 113 aa3.45□□□□□ -1.86
SMNDC1-204ENST00000471297 UQCRQO14949 82 aa3.45□□□□□ -1.86
SMNDC1-204ENST00000471297 PRAC1Q96KF2 57 aa3.45□□□□□ -1.86
SMNDC1-204ENST00000471297 SRRM2Q9UQ35 2752 aaKnown RBP3.44□□□□□ -1.86
SMNDC1-204ENST00000471297 KMT2CQ8NEZ4 4911 aaKnown RBP3.44□□□□□ -1.86
SMNDC1-204ENST00000471297 OXTP01178 125 aa3.44□□□□□ -1.86
SMNDC1-204ENST00000471297 WFDC13Q8IUB5 93 aa3.44□□□□□ -1.86
SMNDC1-204ENST00000471297 LINC00313P59037 77 aa3.43□□□□□ -1.86
SMNDC1-204ENST00000471297 TMEM254Q8TBM7 123 aa3.43□□□□□ -1.86
SMNDC1-204ENST00000471297 MRPL34Q9BQ48 92 aaKnown RBP3.42□□□□□ -1.86
SMNDC1-204ENST00000471297 OCR1Q9BZK8 76 aa3.42□□□□□ -1.86
SMNDC1-204ENST00000471297 DYNC1H1Q14204 4646 aaKnown RBP3.42□□□□□ -1.86
SMNDC1-204ENST00000471297 LRP1BQ9NZR2 4599 aa3.41□□□□□ -1.86
SMNDC1-204ENST00000471297 C5orf47Q569G3 176 aa3.41□□□□□ -1.86
SMNDC1-204ENST00000471297 TP53AIP1Q9HCN2 124 aa3.41□□□□□ -1.86
SMNDC1-204ENST00000471297 CCDC179H3BU77 68 aa3.4□□□□□ -1.87
SMNDC1-204ENST00000471297 MT1HL1P0DM35 61 aa3.39□□□□□ -1.87
SMNDC1-204ENST00000471297 KRTAP10-6P60371 365 aaPredicted RBP3.39□□□□□ -1.87
SMNDC1-204ENST00000471297 H3BPC8 53 aa3.38□□□□□ -1.87
SMNDC1-204ENST00000471297 NDUFS5O43920 106 aa3.38□□□□□ -1.87
SMNDC1-204ENST00000471297 FP248Q71RG6 208 aaPredicted RBP3.38□□□□□ -1.87
SMNDC1-204ENST00000471297 VPS13BQ7Z7G8 4022 aa3.37□□□□□ -1.87
SMNDC1-204ENST00000471297 PKHD1P08F94 4074 aa3.37□□□□□ -1.87
SMNDC1-204ENST00000471297 MP68P56378 58 aa3.37□□□□□ -1.87
SMNDC1-204ENST00000471297 KLKP1Q107X0 134 aa3.37□□□□□ -1.87
SMNDC1-204ENST00000471297 C20orf197Q8N268 126 aa3.37□□□□□ -1.87
SMNDC1-204ENST00000471297 RYR3Q15413 4870 aa3.37□□□□□ -1.87
SMNDC1-204ENST00000471297 A0A0U1RQV1 116 aa3.36□□□□□ -1.87
SMNDC1-204ENST00000471297 KRTAP16-1A8MUX0 517 aa3.36□□□□□ -1.87
SMNDC1-204ENST00000471297 NDUFC1O43677 76 aa3.36□□□□□ -1.87
SMNDC1-204ENST00000471297 TRAV22A0A0B4J277 110 aa3.35□□□□□ -1.87
SMNDC1-204ENST00000471297 H0Y9P7 68 aa3.35□□□□□ -1.87
SMNDC1-204ENST00000471297 APOBP04114 4563 aaKnown RBP3.35□□□□□ -1.87
SMNDC1-204ENST00000471297 IGLV7-46A0A075B6I9 117 aa3.34□□□□□ -1.87
SMNDC1-204ENST00000471297 RETNLBQ9BQ08 111 aa3.34□□□□□ -1.87
SMNDC1-204ENST00000471297 SNURFQ9Y675 71 aa3.34□□□□□ -1.87
SMNDC1-204ENST00000471297 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
SMNDC1-204ENST00000471297 ZCCHC13Q8WW36 166 aaKnown RBP3.33□□□□□ -1.88
SMNDC1-204ENST00000471297 LINC00208Q96KT6 92 aa3.33□□□□□ -1.88
SMNDC1-204ENST00000471297 C20orf166-AS1Q96NR2 134 aa3.33□□□□□ -1.88
SMNDC1-204ENST00000471297 RYR1P21817 5038 aa3.33□□□□□ -1.88
SMNDC1-204ENST00000471297 NDUFAF8A1L188 74 aa3.32□□□□□ -1.88
SMNDC1-204ENST00000471297 C9orf92A6NGG3 77 aa3.32□□□□□ -1.88
SMNDC1-204ENST00000471297 A8MUU9 505 aa3.32□□□□□ -1.88
SMNDC1-204ENST00000471297 KRTAP10-7P60409 375 aaPredicted RBP3.32□□□□□ -1.88
SMNDC1-204ENST00000471297 C1orf64Q8NEQ6 169 aa3.32□□□□□ -1.88
SMNDC1-204ENST00000471297 LOC101927531A0A1B0GV80 90 aa3.31□□□□□ -1.88
SMNDC1-204ENST00000471297 H7BZZ5 65 aa3.31□□□□□ -1.88
SMNDC1-204ENST00000471297 TMEM258P61165 79 aa3.31□□□□□ -1.88
SMNDC1-204ENST00000471297 Q5W150 140 aa3.31□□□□□ -1.88
SMNDC1-204ENST00000471297 FLG2Q5D862 2391 aaPredicted RBP3.31□□□□□ -1.88
SMNDC1-204ENST00000471297 PRR4Q16378 134 aa3.3□□□□□ -1.88
SMNDC1-204ENST00000471297 KRTAP13-3Q3SY46 172 aa3.3□□□□□ -1.88
SMNDC1-204ENST00000471297 CYSTM1Q9H1C7 97 aa3.3□□□□□ -1.88
SMNDC1-204ENST00000471297 PKHD1L1Q86WI1 4243 aa3.29□□□□□ -1.88
SMNDC1-204ENST00000471297 ATP5EP56381 51 aaPredicted RBP3.29□□□□□ -1.88
SMNDC1-204ENST00000471297 HSPG2P98160 4391 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms