RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 HIST1H4AP62805 103 aaKnown RBP8.58□□□□□ -1.04
COL4A5-203ENST00000470339 PRR15Q8IV56 129 aa8.57□□□□□ -1.04
COL4A5-203ENST00000470339 K7EQZ3 153 aa8.56□□□□□ -1.04
COL4A5-203ENST00000470339 DMBT1Q9UGM3 2413 aaPredicted RBP8.56□□□□□ -1.04
COL4A5-203ENST00000470339 HERC1Q15751 4861 aa8.56□□□□□ -1.04
COL4A5-203ENST00000470339 Q8N9L7 120 aa8.55□□□□□ -1.04
COL4A5-203ENST00000470339 A0A1B0GVX0 72 aa8.54□□□□□ -1.04
COL4A5-203ENST00000470339 A0A087WVE0 104 aa8.5□□□□□ -1.05
COL4A5-203ENST00000470339 C8orf87E5RJ46 101 aa8.49□□□□□ -1.05
COL4A5-203ENST00000470339 SCGB1A1P11684 91 aa8.49□□□□□ -1.05
COL4A5-203ENST00000470339 IGHV6-1A0A0B4J1U7 121 aa8.48□□□□□ -1.05
COL4A5-203ENST00000470339 J3QL48 77 aa8.48□□□□□ -1.05
COL4A5-203ENST00000470339 FP248Q71RG6 208 aaPredicted RBP8.48□□□□□ -1.05
COL4A5-203ENST00000470339 HCG22E2RYF7 251 aa8.47□□□□□ -1.05
COL4A5-203ENST00000470339 C8orf17Q9NRJ1 99 aa8.46□□□□□ -1.06
COL4A5-203ENST00000470339 MMP24-AS1A0A0U1RRL7 71 aa8.45□□□□□ -1.06
COL4A5-203ENST00000470339 FAM236AA0A1B0GUQ0 79 aa8.44□□□□□ -1.06
COL4A5-203ENST00000470339 FAM236BA0A1B0GV22 79 aa8.44□□□□□ -1.06
COL4A5-203ENST00000470339 LINC00313P59037 77 aa8.44□□□□□ -1.06
COL4A5-203ENST00000470339 RETNLBQ9BQ08 111 aa8.44□□□□□ -1.06
COL4A5-203ENST00000470339 CASC2Q6XLA1 102 aa8.43□□□□□ -1.06
COL4A5-203ENST00000470339 hDV103S1A0JD37 113 aa8.42□□□□□ -1.06
COL4A5-203ENST00000470339 NOTCH2NLQ7Z3S9 236 aa8.41□□□□□ -1.06
COL4A5-203ENST00000470339 TMEM254Q8TBM7 123 aa8.4□□□□□ -1.06
COL4A5-203ENST00000470339 WFDC13Q8IUB5 93 aa8.39□□□□□ -1.07
COL4A5-203ENST00000470339 ATOX1O00244 68 aa8.38□□□□□ -1.07
COL4A5-203ENST00000470339 IGLV7-46A0A075B6I9 117 aa8.37□□□□□ -1.07
COL4A5-203ENST00000470339 MRPL34Q9BQ48 92 aaKnown RBP8.37□□□□□ -1.07
COL4A5-203ENST00000470339 SMIM20Q8N5G0 67 aa8.36□□□□□ -1.07
COL4A5-203ENST00000470339 KRTAP16-1A8MUX0 517 aa8.35□□□□□ -1.07
COL4A5-203ENST00000470339 LCE2BO14633 110 aa8.35□□□□□ -1.07
COL4A5-203ENST00000470339 PRR4Q16378 134 aa8.32□□□□□ -1.08
COL4A5-203ENST00000470339 Q8N9P0 234 aaPredicted RBP8.32□□□□□ -1.08
COL4A5-203ENST00000470339 OCR1Q9BZK8 76 aa8.31□□□□□ -1.08
COL4A5-203ENST00000470339 TP53AIP1Q9HCN2 124 aa8.31□□□□□ -1.08
COL4A5-203ENST00000470339 KRTAP13-3Q3SY46 172 aa8.3□□□□□ -1.08
COL4A5-203ENST00000470339 TRAV7A0A075B6U4 112 aa8.29□□□□□ -1.08
COL4A5-203ENST00000470339 C9orf92A6NGG3 77 aa8.29□□□□□ -1.08
COL4A5-203ENST00000470339 UQCRQO14949 82 aa8.27□□□□□ -1.09
COL4A5-203ENST00000470339 TPRXLQ17RH7 258 aa8.27□□□□□ -1.09
COL4A5-203ENST00000470339 SERP2Q8N6R1 65 aa8.27□□□□□ -1.09
COL4A5-203ENST00000470339 ANAPC13Q9BS18 74 aa8.27□□□□□ -1.09
COL4A5-203ENST00000470339 NDUFS5O43920 106 aa8.26□□□□□ -1.09
COL4A5-203ENST00000470339 C20orf166-AS1Q96NR2 134 aa8.26□□□□□ -1.09
COL4A5-203ENST00000470339 HMCN2Q8NDA2 5059 aa8.26□□□□□ -1.09
COL4A5-203ENST00000470339 A8MUU9 505 aa8.25□□□□□ -1.09
COL4A5-203ENST00000470339 Q75L30 129 aa8.22□□□□□ -1.09
COL4A5-203ENST00000470339 C5orf47Q569G3 176 aa8.21□□□□□ -1.1
COL4A5-203ENST00000470339 COX7CP15954 63 aa8.2□□□□□ -1.1
COL4A5-203ENST00000470339 XP32Q5T750 250 aa8.19□□□□□ -1.1
COL4A5-203ENST00000470339 TRAV22A0A0B4J277 110 aa8.16□□□□□ -1.1
COL4A5-203ENST00000470339 H0Y9P7 68 aa8.14□□□□□ -1.11
COL4A5-203ENST00000470339 H3BPC8 53 aa8.14□□□□□ -1.11
COL4A5-203ENST00000470339 MP68P56378 58 aa8.14□□□□□ -1.11
COL4A5-203ENST00000470339 RPL37P61927 97 aaKnown RBP8.14□□□□□ -1.11
COL4A5-203ENST00000470339 ZCCHC13Q8WW36 166 aaKnown RBP8.14□□□□□ -1.11
COL4A5-203ENST00000470339 PCP4P48539 62 aa8.13□□□□□ -1.11
COL4A5-203ENST00000470339 Q5W150 140 aa8.13□□□□□ -1.11
COL4A5-203ENST00000470339 ATP11AUNQ6ZP68 121 aa8.1□□□□□ -1.11
COL4A5-203ENST00000470339 A0A0U1RQV1 116 aa8.08□□□□□ -1.12
COL4A5-203ENST00000470339 C20orf197Q8N268 126 aa8.08□□□□□ -1.12
COL4A5-203ENST00000470339 KLKP1Q107X0 134 aa8.07□□□□□ -1.12
COL4A5-203ENST00000470339 LINC00208Q96KT6 92 aa8.07□□□□□ -1.12
COL4A5-203ENST00000470339 CCDC179H3BU77 68 aa8.06□□□□□ -1.12
COL4A5-203ENST00000470339 C1orf64Q8NEQ6 169 aa8.06□□□□□ -1.12
COL4A5-203ENST00000470339 LOC101927531A0A1B0GV80 90 aa8.05□□□□□ -1.12
COL4A5-203ENST00000470339 UBR4Q5T4S7 5183 aa8.02□□□□□ -1.13
COL4A5-203ENST00000470339 IGKV2-30P06310 120 aa8.02□□□□□ -1.13
COL4A5-203ENST00000470339 LPAP08519 4548 aa8.02□□□□□ -1.13
COL4A5-203ENST00000470339 SNURFQ9Y675 71 aa8.01□□□□□ -1.13
COL4A5-203ENST00000470339 NDUFC1O43677 76 aa8□□□□□ -1.13
COL4A5-203ENST00000470339 SEC61BP60468 96 aaKnown RBP8□□□□□ -1.13
COL4A5-203ENST00000470339 CYP4F30PQ9H0H9 118 aa8□□□□□ -1.13
COL4A5-203ENST00000470339 LRP2P98164 4655 aa7.99□□□□□ -1.13
COL4A5-203ENST00000470339 PCOTHQ58A44 107 aa7.97□□□□□ -1.13
COL4A5-203ENST00000470339 C7orf65Q6ZTY9 151 aa7.97□□□□□ -1.13
COL4A5-203ENST00000470339 IGKV2D-30A0A075B6S6 120 aa7.95□□□□□ -1.14
COL4A5-203ENST00000470339 SPINK7P58062 85 aa7.94□□□□□ -1.14
COL4A5-203ENST00000470339 H7BZZ5 65 aa7.92□□□□□ -1.14
COL4A5-203ENST00000470339 CYSTM1Q9H1C7 97 aa7.92□□□□□ -1.14
COL4A5-203ENST00000470339 LOC100996750A0A140TA64 210 aa7.91□□□□□ -1.14
COL4A5-203ENST00000470339 KRTAP4-6Q9BYQ5 205 aa7.91□□□□□ -1.14
COL4A5-203ENST00000470339 LCE2AQ5TA79 106 aaPredicted RBP7.89□□□□□ -1.15
COL4A5-203ENST00000470339 SPANXA2-OT1Q8N9U9 137 aa7.86□□□□□ -1.15
COL4A5-203ENST00000470339 HRES1P13985 223 aa7.84□□□□□ -1.15
COL4A5-203ENST00000470339 MUC17Q685J3 4493 aa7.83□□□□□ -1.16
COL4A5-203ENST00000470339 TMEM258P61165 79 aa7.83□□□□□ -1.16
COL4A5-203ENST00000470339 RNF213Q63HN8 5207 aa7.8□□□□□ -1.16
COL4A5-203ENST00000470339 ATP5EP56381 51 aaPredicted RBP7.79□□□□□ -1.16
COL4A5-203ENST00000470339 C4orf26Q17RF5 130 aa7.76□□□□□ -1.17
COL4A5-203ENST00000470339 KRTAP4-1Q9BYQ7 146 aa7.75□□□□□ -1.17
COL4A5-203ENST00000470339 FAM236DA0A1B0GTK5 79 aa7.74□□□□□ -1.17
COL4A5-203ENST00000470339 FAM236CP0DP71 79 aa7.74□□□□□ -1.17
COL4A5-203ENST00000470339 MPLKIPQ8TAP9 179 aa7.74□□□□□ -1.17
COL4A5-203ENST00000470339 A8MUN3 132 aa7.73□□□□□ -1.17
COL4A5-203ENST00000470339 COX6B2Q6YFQ2 88 aa7.73□□□□□ -1.17
COL4A5-203ENST00000470339 DMAC1Q96GE9 116 aa7.72□□□□□ -1.17
COL4A5-203ENST00000470339 RBM12B-AS1Q9P1G2 102 aa7.71□□□□□ -1.18
COL4A5-203ENST00000470339 ACYP2P14621 99 aa7.68□□□□□ -1.18
COL4A5-203ENST00000470339 KRTAP3-1Q9BYR8 98 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms