RNA–Protein interactions for RNA: ENST00000469878.5

EFNA1-203, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,288 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-203ENST00000469878 COL5A1-AS1Q5SY13 56 aa6.8□□□□□ -1.32
EFNA1-203ENST00000469878 USH2AO75445 5202 aa6.8□□□□□ -1.32
EFNA1-203ENST00000469878 TRBV20-1A0A075B6N2 111 aa6.79□□□□□ -1.32
EFNA1-203ENST00000469878 TRBV7-4A0A0J9YYF1 115 aa6.79□□□□□ -1.32
EFNA1-203ENST00000469878 H3BQ85 93 aa6.78□□□□□ -1.32
EFNA1-203ENST00000469878 LINC00472Q9H8W2 130 aa6.78□□□□□ -1.32
EFNA1-203ENST00000469878 C9JAW5 83 aa6.77□□□□□ -1.33
EFNA1-203ENST00000469878 HRES1P13985 223 aa6.77□□□□□ -1.33
EFNA1-203ENST00000469878 IGHV6-1A0A0B4J1U7 121 aa6.76□□□□□ -1.33
EFNA1-203ENST00000469878 MT2AP02795 61 aa6.76□□□□□ -1.33
EFNA1-203ENST00000469878 CCKP06307 115 aa6.76□□□□□ -1.33
EFNA1-203ENST00000469878 LYRM7Q5U5X0 104 aa6.76□□□□□ -1.33
EFNA1-203ENST00000469878 MTURNQ8N3F0 131 aa6.76□□□□□ -1.33
EFNA1-203ENST00000469878 SSPOA2VEC9 5147 aa6.75□□□□□ -1.33
EFNA1-203ENST00000469878 MPLKIPQ8TAP9 179 aa6.75□□□□□ -1.33
EFNA1-203ENST00000469878 FAM236DA0A1B0GTK5 79 aa6.74□□□□□ -1.33
EFNA1-203ENST00000469878 FAM236CP0DP71 79 aa6.74□□□□□ -1.33
EFNA1-203ENST00000469878 SPCS1Q9Y6A9 102 aa6.74□□□□□ -1.33
EFNA1-203ENST00000469878 MT1FP04733 61 aa6.73□□□□□ -1.33
EFNA1-203ENST00000469878 RBM3P98179 157 aaKnown RBP6.73□□□□□ -1.33
EFNA1-203ENST00000469878 SMCPP49901 116 aaPredicted RBP6.72□□□□□ -1.33
EFNA1-203ENST00000469878 VPS25Q9BRG1 176 aa6.72□□□□□ -1.33
EFNA1-203ENST00000469878 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.7□□□□□ -1.34
EFNA1-203ENST00000469878 A0A1B0GVX0 72 aa6.69□□□□□ -1.34
EFNA1-203ENST00000469878 K7EP34 96 aa6.69□□□□□ -1.34
EFNA1-203ENST00000469878 PRO0461Q9UI25 63 aa6.69□□□□□ -1.34
EFNA1-203ENST00000469878 H3BT86 120 aa6.68□□□□□ -1.34
EFNA1-203ENST00000469878 DSCR8Q96T75 97 aa6.68□□□□□ -1.34
EFNA1-203ENST00000469878 JMJD7-PLA2G4BH0Y9G9 81 aa6.67□□□□□ -1.34
EFNA1-203ENST00000469878 C14orf132Q9NPU4 83 aa6.67□□□□□ -1.34
EFNA1-203ENST00000469878 RBM12B-AS1Q9P1G2 102 aa6.67□□□□□ -1.34
EFNA1-203ENST00000469878 Q6ZQT0 140 aa6.66□□□□□ -1.34
EFNA1-203ENST00000469878 LOC110117498A0A087WWA1 95 aa6.65□□□□□ -1.34
EFNA1-203ENST00000469878 C8orf87E5RJ46 101 aa6.64□□□□□ -1.35
EFNA1-203ENST00000469878 KRTAP9-3Q9BYQ3 159 aa6.64□□□□□ -1.35
EFNA1-203ENST00000469878 KRTAP9-7A8MTY7 169 aa6.63□□□□□ -1.35
EFNA1-203ENST00000469878 KRTAP10-10P60014 251 aa6.62□□□□□ -1.35
EFNA1-203ENST00000469878 ZCCHC13Q8WW36 166 aaKnown RBP6.62□□□□□ -1.35
EFNA1-203ENST00000469878 FCGBPQ9Y6R7 5405 aaPredicted RBP6.61□□□□□ -1.35
EFNA1-203ENST00000469878 KRTAP19-1Q8IUB9 90 aa6.61□□□□□ -1.35
EFNA1-203ENST00000469878 SPINK7P58062 85 aa6.6□□□□□ -1.35
EFNA1-203ENST00000469878 GTF2H5Q6ZYL4 71 aa6.6□□□□□ -1.35
EFNA1-203ENST00000469878 PDE6GP18545 87 aa6.59□□□□□ -1.35
EFNA1-203ENST00000469878 J3KT08 172 aa6.56□□□□□ -1.36
EFNA1-203ENST00000469878 Q8N9P0 234 aaPredicted RBP6.56□□□□□ -1.36
EFNA1-203ENST00000469878 A0A1B0GV90 55 aa6.55□□□□□ -1.36
EFNA1-203ENST00000469878 F8W1H4 67 aa6.55□□□□□ -1.36
EFNA1-203ENST00000469878 C8orf17Q9NRJ1 99 aa6.55□□□□□ -1.36
EFNA1-203ENST00000469878 IGKV3D-7A0A0C4DH55 119 aa6.54□□□□□ -1.36
EFNA1-203ENST00000469878 A0A1B0GW54 56 aa6.54□□□□□ -1.36
EFNA1-203ENST00000469878 A8MWP4 228 aa6.53□□□□□ -1.36
EFNA1-203ENST00000469878 WFDC13Q8IUB5 93 aa6.53□□□□□ -1.36
EFNA1-203ENST00000469878 ETDBQ3ZM63 59 aa6.52□□□□□ -1.37
EFNA1-203ENST00000469878 NDUFB1O75438 58 aa6.51□□□□□ -1.37
EFNA1-203ENST00000469878 C21orf62-AS1Q17RA5 79 aa6.5□□□□□ -1.37
EFNA1-203ENST00000469878 NREPQ16612 68 aa6.49□□□□□ -1.37
EFNA1-203ENST00000469878 Q6ZVQ6 151 aa6.48□□□□□ -1.37
EFNA1-203ENST00000469878 SYNE2Q8WXH0 6885 aaKnown RBP6.48□□□□□ -1.37
EFNA1-203ENST00000469878 LOC100996750A0A140TA64 210 aa6.47□□□□□ -1.37
EFNA1-203ENST00000469878 KRTAP4-6Q9BYQ5 205 aa6.47□□□□□ -1.37
EFNA1-203ENST00000469878 MACF1Q9UPN3 7388 aaKnown RBP6.46□□□□□ -1.37
EFNA1-203ENST00000469878 MMP24-AS1A0A0U1RRL7 71 aa6.46□□□□□ -1.38
EFNA1-203ENST00000469878 PRR15Q8IV56 129 aa6.46□□□□□ -1.38
EFNA1-203ENST00000469878 LINC00846Q9NV44 126 aa6.46□□□□□ -1.38
EFNA1-203ENST00000469878 K7EQZ3 153 aa6.42□□□□□ -1.38
EFNA1-203ENST00000469878 MRPL34Q9BQ48 92 aaKnown RBP6.42□□□□□ -1.38
EFNA1-203ENST00000469878 KRTAP19-6Q3LI70 58 aa6.41□□□□□ -1.38
EFNA1-203ENST00000469878 TMEM254Q8TBM7 123 aa6.41□□□□□ -1.38
EFNA1-203ENST00000469878 BPY2O14599 106 aa6.38□□□□□ -1.39
EFNA1-203ENST00000469878 hDV103S1A0JD37 113 aa6.37□□□□□ -1.39
EFNA1-203ENST00000469878 NDUFS5O43920 106 aa6.37□□□□□ -1.39
EFNA1-203ENST00000469878 Q8N9L7 120 aa6.37□□□□□ -1.39
EFNA1-203ENST00000469878 IGKV2D-30A0A075B6S6 120 aa6.35□□□□□ -1.39
EFNA1-203ENST00000469878 IGKV2-30P06310 120 aa6.35□□□□□ -1.39
EFNA1-203ENST00000469878 H1FX-AS1Q4G0G2 97 aa6.35□□□□□ -1.39
EFNA1-203ENST00000469878 Q5W150 140 aa6.35□□□□□ -1.39
EFNA1-203ENST00000469878 UBL5Q9BZL1 73 aa6.35□□□□□ -1.39
EFNA1-203ENST00000469878 ACYP1P07311 99 aa6.29□□□□□ -1.4
EFNA1-203ENST00000469878 FAM240AA0A1B0GVK7 77 aa6.28□□□□□ -1.4
EFNA1-203ENST00000469878 C7orf65Q6ZTY9 151 aa6.28□□□□□ -1.4
EFNA1-203ENST00000469878 HCG22E2RYF7 251 aa6.26□□□□□ -1.41
EFNA1-203ENST00000469878 CXCL6P80162 114 aa6.26□□□□□ -1.41
EFNA1-203ENST00000469878 C4orf26Q17RF5 130 aa6.25□□□□□ -1.41
EFNA1-203ENST00000469878 CASC2Q6XLA1 102 aa6.25□□□□□ -1.41
EFNA1-203ENST00000469878 C5orf47Q569G3 176 aa6.19□□□□□ -1.42
EFNA1-203ENST00000469878 KRTAP3-1Q9BYR8 98 aa6.19□□□□□ -1.42
EFNA1-203ENST00000469878 LINC00643Q86TS7 51 aa6.18□□□□□ -1.42
EFNA1-203ENST00000469878 KRTAP6-3Q3LI67 103 aa6.17□□□□□ -1.42
EFNA1-203ENST00000469878 ATP5EP2Q5VTU8 51 aa6.15□□□□□ -1.42
EFNA1-203ENST00000469878 J3QR89 54 aa6.14□□□□□ -1.43
EFNA1-203ENST00000469878 A0A087WVE0 104 aa6.13□□□□□ -1.43
EFNA1-203ENST00000469878 HIST1H4AP62805 103 aaKnown RBP6.13□□□□□ -1.43
EFNA1-203ENST00000469878 FAM236AA0A1B0GUQ0 79 aa6.12□□□□□ -1.43
EFNA1-203ENST00000469878 FAM236BA0A1B0GV22 79 aa6.12□□□□□ -1.43
EFNA1-203ENST00000469878 MT1BP07438 61 aa6.12□□□□□ -1.43
EFNA1-203ENST00000469878 S4R3F8 94 aa6.11□□□□□ -1.43
EFNA1-203ENST00000469878 LCA10Q71F78 164 aa6.1□□□□□ -1.43
EFNA1-203ENST00000469878 NEBP20929 6669 aa6.09□□□□□ -1.43
EFNA1-203ENST00000469878 C1orf64Q8NEQ6 169 aa6.09□□□□□ -1.43
EFNA1-203ENST00000469878 K7ERU9 68 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms