RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 KRTAP1-5Q9BYS1 174 aa4.83□□□□□ -1.64
TPM3-215ENST00000469717 PLAC8Q9NZF1 115 aa4.83□□□□□ -1.64
TPM3-215ENST00000469717 CMYA5Q8N3K9 4069 aa4.83□□□□□ -1.64
TPM3-215ENST00000469717 NBDYA0A0U1RRE5 68 aa4.83□□□□□ -1.64
TPM3-215ENST00000469717 IGHV6-1A0A0B4J1U7 121 aa4.82□□□□□ -1.64
TPM3-215ENST00000469717 Q96NJ1 140 aa4.82□□□□□ -1.64
TPM3-215ENST00000469717 FLG2Q5D862 2391 aaPredicted RBP4.82□□□□□ -1.64
TPM3-215ENST00000469717 DNAH7Q8WXX0 4024 aa4.81□□□□□ -1.64
TPM3-215ENST00000469717 PANO1I0J062 215 aa4.8□□□□□ -1.64
TPM3-215ENST00000469717 HUWE1Q7Z6Z7 4374 aaKnown RBP4.8□□□□□ -1.64
TPM3-215ENST00000469717 C8orf17Q9NRJ1 99 aa4.79□□□□□ -1.64
TPM3-215ENST00000469717 ANAPC11Q9NYG5 84 aa4.79□□□□□ -1.64
TPM3-215ENST00000469717 SMR3BP02814 79 aaPredicted RBP4.77□□□□□ -1.65
TPM3-215ENST00000469717 Q5W150 140 aa4.77□□□□□ -1.65
TPM3-215ENST00000469717 Q6ZR54 194 aa4.77□□□□□ -1.65
TPM3-215ENST00000469717 SPRR1BP22528 89 aa4.76□□□□□ -1.65
TPM3-215ENST00000469717 APLNQ9ULZ1 77 aa4.76□□□□□ -1.65
TPM3-215ENST00000469717 SPINK6Q6UWN8 80 aa4.75□□□□□ -1.65
TPM3-215ENST00000469717 FBN3Q75N90 2809 aa4.75□□□□□ -1.65
TPM3-215ENST00000469717 RTL8CO15255 209 aa4.74□□□□□ -1.65
TPM3-215ENST00000469717 DNAH8Q96JB1 4490 aa4.74□□□□□ -1.65
TPM3-215ENST00000469717 A0A1B0GVX0 72 aa4.74□□□□□ -1.65
TPM3-215ENST00000469717 TP53AIP1Q9HCN2 124 aa4.74□□□□□ -1.65
TPM3-215ENST00000469717 ALMS1Q8TCU4 4167 aa4.73□□□□□ -1.65
TPM3-215ENST00000469717 MRPL34Q9BQ48 92 aaKnown RBP4.73□□□□□ -1.65
TPM3-215ENST00000469717 CDK2AP2O75956 126 aa4.73□□□□□ -1.65
TPM3-215ENST00000469717 MEGF8Q7Z7M0 2845 aa4.73□□□□□ -1.65
TPM3-215ENST00000469717 DNAH3Q8TD57 4116 aa4.72□□□□□ -1.65
TPM3-215ENST00000469717 CSAG1Q6PB30 78 aa4.7□□□□□ -1.66
TPM3-215ENST00000469717 KRTAP13-1Q8IUC0 172 aa4.7□□□□□ -1.66
TPM3-215ENST00000469717 A0A087WTM6 91 aa4.69□□□□□ -1.66
TPM3-215ENST00000469717 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.69□□□□□ -1.66
TPM3-215ENST00000469717 CIRBP-AS1Q8TBR5 109 aa4.68□□□□□ -1.66
TPM3-215ENST00000469717 PLECQ15149 4684 aaKnown RBP4.67□□□□□ -1.66
TPM3-215ENST00000469717 DNAH17Q9UFH2 4485 aa4.67□□□□□ -1.66
TPM3-215ENST00000469717 KRTAP13-3Q3SY46 172 aa4.67□□□□□ -1.66
TPM3-215ENST00000469717 ROMO1P60602 79 aa4.67□□□□□ -1.66
TPM3-215ENST00000469717 A0A1B0GU69 56 aa4.66□□□□□ -1.66
TPM3-215ENST00000469717 ACYP2P14621 99 aa4.65□□□□□ -1.67
TPM3-215ENST00000469717 HECTD4Q9Y4D8 3996 aa4.62□□□□□ -1.67
TPM3-215ENST00000469717 PSORS1C2Q9UIG4 136 aa4.62□□□□□ -1.67
TPM3-215ENST00000469717 MIR22HGQ0VDD5 57 aa4.62□□□□□ -1.67
TPM3-215ENST00000469717 DMAC1Q96GE9 116 aa4.61□□□□□ -1.67
TPM3-215ENST00000469717 SPATA8Q6RVD6 105 aa4.61□□□□□ -1.67
TPM3-215ENST00000469717 LINC00483Q53H64 154 aa4.61□□□□□ -1.67
TPM3-215ENST00000469717 KMT2AQ03164 3969 aa4.6□□□□□ -1.67
TPM3-215ENST00000469717 KRTAP10-2P60368 255 aa4.59□□□□□ -1.68
TPM3-215ENST00000469717 SPACA4Q8TDM5 124 aa4.59□□□□□ -1.68
TPM3-215ENST00000469717 FAM229AH3BQW9 127 aa4.58□□□□□ -1.68
TPM3-215ENST00000469717 KRTAP16-1A8MUX0 517 aa4.57□□□□□ -1.68
TPM3-215ENST00000469717 UQCR11O14957 56 aa4.57□□□□□ -1.68
TPM3-215ENST00000469717 SPINK1P00995 79 aa4.57□□□□□ -1.68
TPM3-215ENST00000469717 DNHD1Q96M86 4753 aa4.57□□□□□ -1.68
TPM3-215ENST00000469717 VPS13DQ5THJ4 4388 aa4.57□□□□□ -1.68
TPM3-215ENST00000469717 DNAH6Q9C0G6 4158 aa4.57□□□□□ -1.68
TPM3-215ENST00000469717 IGKV2D-30A0A075B6S6 120 aa4.56□□□□□ -1.68
TPM3-215ENST00000469717 IGKV2-30P06310 120 aa4.56□□□□□ -1.68
TPM3-215ENST00000469717 STARD9Q9P2P6 4700 aa4.56□□□□□ -1.68
TPM3-215ENST00000469717 Q6ZRN7 208 aaPredicted RBP4.56□□□□□ -1.68
TPM3-215ENST00000469717 DNAH2Q9P225 4427 aa4.55□□□□□ -1.68
TPM3-215ENST00000469717 ZNF861PO60384 105 aa4.54□□□□□ -1.68
TPM3-215ENST00000469717 KRTAP10-1P60331 282 aa4.51□□□□□ -1.69
TPM3-215ENST00000469717 DNAH11Q96DT5 4516 aa4.51□□□□□ -1.69
TPM3-215ENST00000469717 KRTAP21-3Q3LHN1 58 aa4.51□□□□□ -1.69
TPM3-215ENST00000469717 Q8N1X5 172 aa4.51□□□□□ -1.69
TPM3-215ENST00000469717 KRTAP25-1Q3LHN0 102 aa4.5□□□□□ -1.69
TPM3-215ENST00000469717 TYMSOSQ8TAI1 123 aa4.5□□□□□ -1.69
TPM3-215ENST00000469717 CRIPTQ9P021 101 aa4.5□□□□□ -1.69
TPM3-215ENST00000469717 DYNC2H1Q8NCM8 4307 aaKnown RBP4.5□□□□□ -1.69
TPM3-215ENST00000469717 J3QL48 77 aa4.49□□□□□ -1.69
TPM3-215ENST00000469717 P0C880 135 aa4.49□□□□□ -1.69
TPM3-215ENST00000469717 IGLV7-43P04211 117 aa4.48□□□□□ -1.69
TPM3-215ENST00000469717 LRP1BQ9NZR2 4599 aa4.46□□□□□ -1.69
TPM3-215ENST00000469717 H0YAA0 97 aa4.46□□□□□ -1.7
TPM3-215ENST00000469717 PRKDCP78527 4128 aaKnown RBP4.45□□□□□ -1.7
TPM3-215ENST00000469717 KRTAP13-2Q52LG2 175 aa4.44□□□□□ -1.7
TPM3-215ENST00000469717 Q6ZSA8 131 aa4.44□□□□□ -1.7
TPM3-215ENST00000469717 SEC61BP60468 96 aaKnown RBP4.44□□□□□ -1.7
TPM3-215ENST00000469717 LINC00304Q8N9R0 145 aa4.43□□□□□ -1.7
TPM3-215ENST00000469717 DNAH5Q8TE73 4624 aa4.42□□□□□ -1.7
TPM3-215ENST00000469717 A8MUU9 505 aa4.42□□□□□ -1.7
TPM3-215ENST00000469717 C9orf92A6NGG3 77 aa4.41□□□□□ -1.7
TPM3-215ENST00000469717 C20orf166-AS1Q96NR2 134 aa4.41□□□□□ -1.7
TPM3-215ENST00000469717 K7ERS5 55 aa4.4□□□□□ -1.7
TPM3-215ENST00000469717 VPS13BQ7Z7G8 4022 aa4.4□□□□□ -1.71
TPM3-215ENST00000469717 NDUFAF8A1L188 74 aa4.4□□□□□ -1.71
TPM3-215ENST00000469717 LUZP6Q538Z0 58 aa4.4□□□□□ -1.71
TPM3-215ENST00000469717 SSBP3-AS1Q7Z2R9 100 aa4.4□□□□□ -1.71
TPM3-215ENST00000469717 FAT2Q9NYQ8 4349 aa4.39□□□□□ -1.71
TPM3-215ENST00000469717 Q5VSD8 79 aa4.38□□□□□ -1.71
TPM3-215ENST00000469717 SPINT4Q6UDR6 99 aa4.36□□□□□ -1.71
TPM3-215ENST00000469717 A0A1B0GU33 70 aa4.34□□□□□ -1.72
TPM3-215ENST00000469717 KRTAP3-1Q9BYR8 98 aa4.32□□□□□ -1.72
TPM3-215ENST00000469717 KRTAP1-4P0C5Y4 121 aa4.31□□□□□ -1.72
TPM3-215ENST00000469717 HYDINQ4G0P3 5121 aa4.3□□□□□ -1.72
TPM3-215ENST00000469717 H1FX-AS1Q4G0G2 97 aa4.3□□□□□ -1.72
TPM3-215ENST00000469717 PKHD1P08F94 4074 aa4.28□□□□□ -1.72
TPM3-215ENST00000469717 PKD1P98161 4303 aa4.27□□□□□ -1.73
TPM3-215ENST00000469717 COX6B2Q6YFQ2 88 aa4.26□□□□□ -1.73
TPM3-215ENST00000469717 C10orf95Q9H7T3 257 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms