RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 SMCPP49901 116 aaPredicted RBP6.21□□□□□ -1.42
TRAPPC12-216ENST00000469400 LINC00313P59037 77 aa6.21□□□□□ -1.42
TRAPPC12-216ENST00000469400 PSMB2P49721 201 aa6.2□□□□□ -1.42
TRAPPC12-216ENST00000469400 GTF2H5Q6ZYL4 71 aa6.2□□□□□ -1.42
TRAPPC12-216ENST00000469400 NAA38Q9BRA0 125 aaKnown RBP6.2□□□□□ -1.42
TRAPPC12-216ENST00000469400 K7EP34 96 aa6.19□□□□□ -1.42
TRAPPC12-216ENST00000469400 TRIAP1O43715 76 aa6.19□□□□□ -1.42
TRAPPC12-216ENST00000469400 SIGMAR1Q99720 223 aa6.19□□□□□ -1.42
TRAPPC12-216ENST00000469400 SPCS1Q9Y6A9 102 aa6.19□□□□□ -1.42
TRAPPC12-216ENST00000469400 UBE2V1Q13404 147 aa6.18□□□□□ -1.42
TRAPPC12-216ENST00000469400 SCGB1C2P0DMR2 95 aa6.17□□□□□ -1.42
TRAPPC12-216ENST00000469400 MTURNQ8N3F0 131 aa6.17□□□□□ -1.42
TRAPPC12-216ENST00000469400 H0YGX0 51 aa6.16□□□□□ -1.42
TRAPPC12-216ENST00000469400 NDUFV3P56181 108 aaKnown RBP6.15□□□□□ -1.42
TRAPPC12-216ENST00000469400 ATXN8Q156A1 80 aa6.15□□□□□ -1.42
TRAPPC12-216ENST00000469400 A8MWP4 228 aa6.14□□□□□ -1.43
TRAPPC12-216ENST00000469400 Q8N9P0 234 aaPredicted RBP6.14□□□□□ -1.43
TRAPPC12-216ENST00000469400 A0A1B0GX51 115 aa6.13□□□□□ -1.43
TRAPPC12-216ENST00000469400 IGKV4-1P06312 121 aa6.13□□□□□ -1.43
TRAPPC12-216ENST00000469400 H3BMG7 143 aa6.12□□□□□ -1.43
TRAPPC12-216ENST00000469400 TRACP01848 142 aa6.12□□□□□ -1.43
TRAPPC12-216ENST00000469400 MUC12Q9UKN1 5478 aa6.12□□□□□ -1.43
TRAPPC12-216ENST00000469400 A0A1W2PNM2 257 aa6.11□□□□□ -1.43
TRAPPC12-216ENST00000469400 F8W1H4 67 aa6.1□□□□□ -1.43
TRAPPC12-216ENST00000469400 SNCGO76070 127 aa6.09□□□□□ -1.43
TRAPPC12-216ENST00000469400 FAM218AQ96MZ4 157 aa6.09□□□□□ -1.43
TRAPPC12-216ENST00000469400 PRO0461Q9UI25 63 aa6.09□□□□□ -1.43
TRAPPC12-216ENST00000469400 SPINK7P58062 85 aa6.08□□□□□ -1.44
TRAPPC12-216ENST00000469400 IGHV6-1A0A0B4J1U7 121 aa6.07□□□□□ -1.44
TRAPPC12-216ENST00000469400 H3BT86 120 aa6.07□□□□□ -1.44
TRAPPC12-216ENST00000469400 DEFB116Q30KQ4 102 aa6.07□□□□□ -1.44
TRAPPC12-216ENST00000469400 C9JAW5 83 aa6.06□□□□□ -1.44
TRAPPC12-216ENST00000469400 DNAL4O96015 105 aa6.06□□□□□ -1.44
TRAPPC12-216ENST00000469400 KRTAP20-1Q3LI63 56 aa6.06□□□□□ -1.44
TRAPPC12-216ENST00000469400 LINC00472Q9H8W2 130 aa6.05□□□□□ -1.44
TRAPPC12-216ENST00000469400 H3BQ85 93 aa6.04□□□□□ -1.44
TRAPPC12-216ENST00000469400 GHRHP01286 108 aa6.04□□□□□ -1.44
TRAPPC12-216ENST00000469400 ANKRD29Q8N6D5 301 aa6.04□□□□□ -1.44
TRAPPC12-216ENST00000469400 ZCCHC13Q8WW36 166 aaKnown RBP6.04□□□□□ -1.44
TRAPPC12-216ENST00000469400 TRBV7-4A0A0J9YYF1 115 aa6.03□□□□□ -1.44
TRAPPC12-216ENST00000469400 ORMDL1Q9P0S3 153 aa6.03□□□□□ -1.44
TRAPPC12-216ENST00000469400 C8orf87E5RJ46 101 aa6□□□□□ -1.45
TRAPPC12-216ENST00000469400 TMEM256-PLSCR3K7ERE1 68 aa6□□□□□ -1.45
TRAPPC12-216ENST00000469400 BAALC-AS2P0C853 105 aa6□□□□□ -1.45
TRAPPC12-216ENST00000469400 WFDC13Q8IUB5 93 aa6□□□□□ -1.45
TRAPPC12-216ENST00000469400 ETDBQ3ZM63 59 aa5.99□□□□□ -1.45
TRAPPC12-216ENST00000469400 A0A1B0GVX0 72 aa5.98□□□□□ -1.45
TRAPPC12-216ENST00000469400 A0A1B0GV72 72 aa5.97□□□□□ -1.45
TRAPPC12-216ENST00000469400 K7ERU9 68 aa5.96□□□□□ -1.46
TRAPPC12-216ENST00000469400 JMJD7-PLA2G4BH0Y9G9 81 aa5.95□□□□□ -1.46
TRAPPC12-216ENST00000469400 A6NN06 94 aa5.94□□□□□ -1.46
TRAPPC12-216ENST00000469400 CCKP06307 115 aa5.94□□□□□ -1.46
TRAPPC12-216ENST00000469400 J3QR89 54 aa5.93□□□□□ -1.46
TRAPPC12-216ENST00000469400 C21orf62-AS1Q17RA5 79 aa5.91□□□□□ -1.46
TRAPPC12-216ENST00000469400 H1FX-AS1Q4G0G2 97 aa5.9□□□□□ -1.46
TRAPPC12-216ENST00000469400 PDE6GP18545 87 aa5.89□□□□□ -1.47
TRAPPC12-216ENST00000469400 RBM3P98179 157 aaKnown RBP5.89□□□□□ -1.47
TRAPPC12-216ENST00000469400 KMT2DO14686 5537 aa5.88□□□□□ -1.47
TRAPPC12-216ENST00000469400 LOC110117498A0A087WWA1 95 aa5.88□□□□□ -1.47
TRAPPC12-216ENST00000469400 FAM240AA0A1B0GVK7 77 aa5.88□□□□□ -1.47
TRAPPC12-216ENST00000469400 MDN1Q9NU22 5596 aa5.88□□□□□ -1.47
TRAPPC12-216ENST00000469400 KRTAP5-9P26371 169 aa5.87□□□□□ -1.47
TRAPPC12-216ENST00000469400 ACYP1P07311 99 aa5.86□□□□□ -1.47
TRAPPC12-216ENST00000469400 DSCR8Q96T75 97 aa5.86□□□□□ -1.47
TRAPPC12-216ENST00000469400 VPS25Q9BRG1 176 aa5.86□□□□□ -1.47
TRAPPC12-216ENST00000469400 C14orf132Q9NPU4 83 aa5.86□□□□□ -1.47
TRAPPC12-216ENST00000469400 J3KT08 172 aa5.85□□□□□ -1.47
TRAPPC12-216ENST00000469400 MT1BP07438 61 aa5.85□□□□□ -1.47
TRAPPC12-216ENST00000469400 PCP4P48539 62 aa5.84□□□□□ -1.47
TRAPPC12-216ENST00000469400 Q6ZQT0 140 aa5.84□□□□□ -1.47
TRAPPC12-216ENST00000469400 IGKV3D-7A0A0C4DH55 119 aa5.83□□□□□ -1.48
TRAPPC12-216ENST00000469400 A0A1B0GW54 56 aa5.82□□□□□ -1.48
TRAPPC12-216ENST00000469400 NDUFB1O75438 58 aa5.82□□□□□ -1.48
TRAPPC12-216ENST00000469400 C8orf17Q9NRJ1 99 aa5.82□□□□□ -1.48
TRAPPC12-216ENST00000469400 KRTAP2-3P0C7H8 128 aa5.8□□□□□ -1.48
TRAPPC12-216ENST00000469400 SCGB1A1P11684 91 aa5.8□□□□□ -1.48
TRAPPC12-216ENST00000469400 KRTAP10-5P60370 271 aa5.8□□□□□ -1.48
TRAPPC12-216ENST00000469400 Q5VV11 94 aa5.8□□□□□ -1.48
TRAPPC12-216ENST00000469400 KRTAP2-4Q9BYR9 128 aa5.8□□□□□ -1.48
TRAPPC12-216ENST00000469400 Q6ZVQ6 151 aa5.78□□□□□ -1.48
TRAPPC12-216ENST00000469400 KRTAP19-8Q3LI54 63 aa5.77□□□□□ -1.49
TRAPPC12-216ENST00000469400 FAM236AA0A1B0GUQ0 79 aa5.75□□□□□ -1.49
TRAPPC12-216ENST00000469400 FAM236BA0A1B0GV22 79 aa5.75□□□□□ -1.49
TRAPPC12-216ENST00000469400 LINC00643Q86TS7 51 aa5.74□□□□□ -1.49
TRAPPC12-216ENST00000469400 SPRR2GQ9BYE4 73 aa5.73□□□□□ -1.49
TRAPPC12-216ENST00000469400 UBL5Q9BZL1 73 aa5.73□□□□□ -1.49
TRAPPC12-216ENST00000469400 ATP5EP2Q5VTU8 51 aa5.71□□□□□ -1.5
TRAPPC12-216ENST00000469400 IGKV2D-30A0A075B6S6 120 aa5.7□□□□□ -1.5
TRAPPC12-216ENST00000469400 IGKV2-30P06310 120 aa5.7□□□□□ -1.5
TRAPPC12-216ENST00000469400 C5orf47Q569G3 176 aa5.7□□□□□ -1.5
TRAPPC12-216ENST00000469400 PRR15Q8IV56 129 aa5.69□□□□□ -1.5
TRAPPC12-216ENST00000469400 MRPL34Q9BQ48 92 aaKnown RBP5.69□□□□□ -1.5
TRAPPC12-216ENST00000469400 TMEM254Q8TBM7 123 aa5.68□□□□□ -1.5
TRAPPC12-216ENST00000469400 MMP24-AS1A0A0U1RRL7 71 aa5.67□□□□□ -1.5
TRAPPC12-216ENST00000469400 NREPQ16612 68 aa5.67□□□□□ -1.5
TRAPPC12-216ENST00000469400 NDUFS5O43920 106 aa5.66□□□□□ -1.5
TRAPPC12-216ENST00000469400 CXCL6P80162 114 aa5.66□□□□□ -1.5
TRAPPC12-216ENST00000469400 C7orf65Q6ZTY9 151 aa5.66□□□□□ -1.5
TRAPPC12-216ENST00000469400 IMUPQ9GZP8 106 aa5.66□□□□□ -1.5
TRAPPC12-216ENST00000469400 MT-ATP8P03928 68 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 287 ms