RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 H7BZZ5 65 aa8.58□□□□□ -1.04
COL27A1-203ENST00000468565 C20orf197Q8N268 126 aa8.58□□□□□ -1.04
COL27A1-203ENST00000468565 ST20-AS1Q8NBB2 130 aa8.57□□□□□ -1.04
COL27A1-203ENST00000468565 A0A1B0GW54 56 aa8.56□□□□□ -1.04
COL27A1-203ENST00000468565 ERC2-IT1O76042 136 aa8.56□□□□□ -1.04
COL27A1-203ENST00000468565 PRLHP81277 87 aa8.56□□□□□ -1.04
COL27A1-203ENST00000468565 A0A087X002 238 aa8.54□□□□□ -1.04
COL27A1-203ENST00000468565 NREPQ16612 68 aa8.54□□□□□ -1.04
COL27A1-203ENST00000468565 FAM229BQ4G0N7 80 aa8.53□□□□□ -1.04
COL27A1-203ENST00000468565 F8WEM9 126 aa8.52□□□□□ -1.05
COL27A1-203ENST00000468565 TYMSOSQ8TAI1 123 aa8.51□□□□□ -1.05
COL27A1-203ENST00000468565 FP248Q71RG6 208 aaPredicted RBP8.5□□□□□ -1.05
COL27A1-203ENST00000468565 Q8NBF4 154 aa8.5□□□□□ -1.05
COL27A1-203ENST00000468565 ANAPC11Q9NYG5 84 aa8.5□□□□□ -1.05
COL27A1-203ENST00000468565 A0A1W2PNM2 257 aa8.49□□□□□ -1.05
COL27A1-203ENST00000468565 BRK1Q8WUW1 75 aa8.49□□□□□ -1.05
COL27A1-203ENST00000468565 BPY2O14599 106 aa8.48□□□□□ -1.05
COL27A1-203ENST00000468565 HIGD2AQ9BW72 106 aa8.48□□□□□ -1.05
COL27A1-203ENST00000468565 KRTAP13-2Q52LG2 175 aa8.48□□□□□ -1.05
COL27A1-203ENST00000468565 SMIM29Q86T20 159 aa8.48□□□□□ -1.05
COL27A1-203ENST00000468565 SPRR4Q96PI1 79 aa8.46□□□□□ -1.05
COL27A1-203ENST00000468565 LPAP08519 4548 aa8.46□□□□□ -1.06
COL27A1-203ENST00000468565 ZNF706Q9Y5V0 76 aaPredicted RBP8.44□□□□□ -1.06
COL27A1-203ENST00000468565 IGKV4-1P06312 121 aa8.44□□□□□ -1.06
COL27A1-203ENST00000468565 IGLV8-61A0A075B6I0 122 aa8.43□□□□□ -1.06
COL27A1-203ENST00000468565 PRR15Q8IV56 129 aa8.42□□□□□ -1.06
COL27A1-203ENST00000468565 LINC00304Q8N9R0 145 aa8.42□□□□□ -1.06
COL27A1-203ENST00000468565 SPRR1BP22528 89 aa8.41□□□□□ -1.06
COL27A1-203ENST00000468565 PRR4Q16378 134 aa8.41□□□□□ -1.06
COL27A1-203ENST00000468565 IGFL1Q6UW32 110 aa8.41□□□□□ -1.06
COL27A1-203ENST00000468565 Q8N9L7 120 aa8.41□□□□□ -1.06
COL27A1-203ENST00000468565 PMAIP1Q13794 54 aa8.39□□□□□ -1.07
COL27A1-203ENST00000468565 A0A0U1RQV1 116 aa8.37□□□□□ -1.07
COL27A1-203ENST00000468565 LINC00483Q53H64 154 aa8.36□□□□□ -1.07
COL27A1-203ENST00000468565 SNURFQ9Y675 71 aa8.35□□□□□ -1.07
COL27A1-203ENST00000468565 SPAG11AQ6PDA7 123 aa8.34□□□□□ -1.07
COL27A1-203ENST00000468565 A0A0G2JQZ4 141 aa8.33□□□□□ -1.08
COL27A1-203ENST00000468565 CD164Q04900 197 aa8.33□□□□□ -1.08
COL27A1-203ENST00000468565 TMEM254Q8TBM7 123 aa8.33□□□□□ -1.08
COL27A1-203ENST00000468565 RNF213Q63HN8 5207 aa8.33□□□□□ -1.08
COL27A1-203ENST00000468565 DSCR10P59022 87 aa8.32□□□□□ -1.08
COL27A1-203ENST00000468565 A0A087WSZ3 146 aa8.31□□□□□ -1.08
COL27A1-203ENST00000468565 RETNLBQ9BQ08 111 aa8.3□□□□□ -1.08
COL27A1-203ENST00000468565 OCR1Q9BZK8 76 aa8.29□□□□□ -1.08
COL27A1-203ENST00000468565 Q1T7F1 81 aa8.29□□□□□ -1.08
COL27A1-203ENST00000468565 K7EQZ3 153 aa8.28□□□□□ -1.08
COL27A1-203ENST00000468565 SSBP3-AS1Q7Z2R9 100 aa8.27□□□□□ -1.09
COL27A1-203ENST00000468565 MPLKIPQ8TAP9 179 aa8.26□□□□□ -1.09
COL27A1-203ENST00000468565 SPINK1P00995 79 aa8.25□□□□□ -1.09
COL27A1-203ENST00000468565 MOBPQ13875 183 aa8.25□□□□□ -1.09
COL27A1-203ENST00000468565 IGLV7-46A0A075B6I9 117 aa8.25□□□□□ -1.09
COL27A1-203ENST00000468565 IGLV9-49A0A0B4J1Y8 123 aa8.25□□□□□ -1.09
COL27A1-203ENST00000468565 HCG22E2RYF7 251 aa8.25□□□□□ -1.09
COL27A1-203ENST00000468565 TPRXLQ17RH7 258 aa8.25□□□□□ -1.09
COL27A1-203ENST00000468565 RPS29P62273 56 aaKnown RBP8.23□□□□□ -1.09
COL27A1-203ENST00000468565 DEFB116Q30KQ4 102 aa8.23□□□□□ -1.09
COL27A1-203ENST00000468565 hDV103S1A0JD37 113 aa8.19□□□□□ -1.1
COL27A1-203ENST00000468565 LINC00472Q9H8W2 130 aa8.19□□□□□ -1.1
COL27A1-203ENST00000468565 A8MWP4 228 aa8.17□□□□□ -1.1
COL27A1-203ENST00000468565 WFDC13Q8IUB5 93 aa8.16□□□□□ -1.1
COL27A1-203ENST00000468565 MUC17Q685J3 4493 aa8.15□□□□□ -1.1
COL27A1-203ENST00000468565 NDUFB1O75438 58 aa8.13□□□□□ -1.11
COL27A1-203ENST00000468565 CASC2Q6XLA1 102 aa8.13□□□□□ -1.11
COL27A1-203ENST00000468565 CYP4F30PQ9H0H9 118 aa8.13□□□□□ -1.11
COL27A1-203ENST00000468565 KRTAP13-3Q3SY46 172 aa8.12□□□□□ -1.11
COL27A1-203ENST00000468565 MUC2Q02817 5179 aa8.11□□□□□ -1.11
COL27A1-203ENST00000468565 NDUFS5O43920 106 aa8.1□□□□□ -1.11
COL27A1-203ENST00000468565 KTN1-AS1Q86SY8 53 aa8.09□□□□□ -1.11
COL27A1-203ENST00000468565 Q96NJ1 140 aa8.08□□□□□ -1.12
COL27A1-203ENST00000468565 LIMD2Q9BT23 127 aa8.08□□□□□ -1.12
COL27A1-203ENST00000468565 MP68P56378 58 aa8.07□□□□□ -1.12
COL27A1-203ENST00000468565 ZCCHC13Q8WW36 166 aaKnown RBP8.07□□□□□ -1.12
COL27A1-203ENST00000468565 C1orf64Q8NEQ6 169 aa8.07□□□□□ -1.12
COL27A1-203ENST00000468565 TRAV22A0A0B4J277 110 aa8.05□□□□□ -1.12
COL27A1-203ENST00000468565 MMP24-AS1A0A0U1RRL7 71 aa8.05□□□□□ -1.12
COL27A1-203ENST00000468565 H3BPC8 53 aa8.03□□□□□ -1.12
COL27A1-203ENST00000468565 H0Y9P7 68 aa8.01□□□□□ -1.13
COL27A1-203ENST00000468565 ATP11AUNQ6ZP68 121 aa8.01□□□□□ -1.13
COL27A1-203ENST00000468565 A0A1B0GVX0 72 aa8□□□□□ -1.13
COL27A1-203ENST00000468565 ASB16-AS1Q495Z4 193 aa8□□□□□ -1.13
COL27A1-203ENST00000468565 C8orf17Q9NRJ1 99 aa8□□□□□ -1.13
COL27A1-203ENST00000468565 PSPHP1O15172 72 aa7.99□□□□□ -1.13
COL27A1-203ENST00000468565 LINC00208Q96KT6 92 aa7.99□□□□□ -1.13
COL27A1-203ENST00000468565 IGHV6-1A0A0B4J1U7 121 aa7.97□□□□□ -1.13
COL27A1-203ENST00000468565 SEC61BP60468 96 aaKnown RBP7.97□□□□□ -1.13
COL27A1-203ENST00000468565 XP32Q5T750 250 aa7.97□□□□□ -1.13
COL27A1-203ENST00000468565 TP53AIP1Q9HCN2 124 aa7.97□□□□□ -1.13
COL27A1-203ENST00000468565 RBM12B-AS1Q9P1G2 102 aa7.97□□□□□ -1.13
COL27A1-203ENST00000468565 FAT4Q6V0I7 4981 aa7.96□□□□□ -1.13
COL27A1-203ENST00000468565 SPANXA2-OT1Q8N9U9 137 aa7.95□□□□□ -1.14
COL27A1-203ENST00000468565 Q5VV11 94 aa7.94□□□□□ -1.14
COL27A1-203ENST00000468565 A8MUN3 132 aa7.93□□□□□ -1.14
COL27A1-203ENST00000468565 MRPL34Q9BQ48 92 aaKnown RBP7.92□□□□□ -1.14
COL27A1-203ENST00000468565 CHKB-CPT1BH3BT56 60 aa7.91□□□□□ -1.14
COL27A1-203ENST00000468565 Q75L30 129 aa7.91□□□□□ -1.14
COL27A1-203ENST00000468565 C7orf65Q6ZTY9 151 aa7.88□□□□□ -1.15
COL27A1-203ENST00000468565 C9orf92A6NGG3 77 aa7.88□□□□□ -1.15
COL27A1-203ENST00000468565 C8orf87E5RJ46 101 aa7.88□□□□□ -1.15
COL27A1-203ENST00000468565 KRTAP4-1Q9BYQ7 146 aa7.88□□□□□ -1.15
COL27A1-203ENST00000468565 LOC101927531A0A1B0GV80 90 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms