RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 M0R143 59 aa8.84□□□□□ -0.99
SSBP1-207ENST00000468267 M0R2T5 61 aa8.84□□□□□ -0.99
SSBP1-207ENST00000468267 KRTAP10-6P60371 365 aaPredicted RBP8.84□□□□□ -0.99
SSBP1-207ENST00000468267 DEFB116Q30KQ4 102 aa8.84□□□□□ -0.99
SSBP1-207ENST00000468267 DSCR8Q96T75 97 aa8.84□□□□□ -0.99
SSBP1-207ENST00000468267 KRTAP16-1A8MUX0 517 aa8.82□□□□□ -1
SSBP1-207ENST00000468267 VPS25Q9BRG1 176 aa8.82□□□□□ -1
SSBP1-207ENST00000468267 NOTCH2NLQ7Z3S9 236 aa8.81□□□□□ -1
SSBP1-207ENST00000468267 SMIM6P0DI80 62 aa8.8□□□□□ -1
SSBP1-207ENST00000468267 ATXN8Q156A1 80 aa8.79□□□□□ -1
SSBP1-207ENST00000468267 NAA38Q9BRA0 125 aaKnown RBP8.79□□□□□ -1
SSBP1-207ENST00000468267 IGHV6-1A0A0B4J1U7 121 aa8.78□□□□□ -1
SSBP1-207ENST00000468267 C9JAW5 83 aa8.78□□□□□ -1
SSBP1-207ENST00000468267 C21orf62-AS1Q17RA5 79 aa8.76□□□□□ -1.01
SSBP1-207ENST00000468267 TRBV20-1A0A075B6N2 111 aa8.73□□□□□ -1.01
SSBP1-207ENST00000468267 A0A1B0GVX0 72 aa8.73□□□□□ -1.01
SSBP1-207ENST00000468267 Q6ZQT0 140 aa8.73□□□□□ -1.01
SSBP1-207ENST00000468267 C8orf87E5RJ46 101 aa8.72□□□□□ -1.01
SSBP1-207ENST00000468267 JMJD7-PLA2G4BH0Y9G9 81 aa8.72□□□□□ -1.01
SSBP1-207ENST00000468267 J3KT08 172 aa8.71□□□□□ -1.02
SSBP1-207ENST00000468267 FSIP2Q5CZC0 6907 aa8.7□□□□□ -1.02
SSBP1-207ENST00000468267 LOC110117498A0A087WWA1 95 aa8.7□□□□□ -1.02
SSBP1-207ENST00000468267 TSTD3H0UI37 97 aa8.7□□□□□ -1.02
SSBP1-207ENST00000468267 KRTAP4-2Q9BYR5 136 aa8.7□□□□□ -1.02
SSBP1-207ENST00000468267 A0A1B0GW54 56 aa8.68□□□□□ -1.02
SSBP1-207ENST00000468267 LCE4AQ5TA78 99 aa8.68□□□□□ -1.02
SSBP1-207ENST00000468267 LYRM7Q5U5X0 104 aa8.68□□□□□ -1.02
SSBP1-207ENST00000468267 PDE6GP18545 87 aa8.67□□□□□ -1.02
SSBP1-207ENST00000468267 CRCT1Q9UGL9 99 aa8.66□□□□□ -1.02
SSBP1-207ENST00000468267 BATFQ16520 125 aa8.65□□□□□ -1.02
SSBP1-207ENST00000468267 C14orf132Q9NPU4 83 aa8.64□□□□□ -1.03
SSBP1-207ENST00000468267 NDUFB1O75438 58 aa8.63□□□□□ -1.03
SSBP1-207ENST00000468267 LOC105371267A0A1B0GV96 52 aa8.62□□□□□ -1.03
SSBP1-207ENST00000468267 HRES1P13985 223 aa8.61□□□□□ -1.03
SSBP1-207ENST00000468267 MPLKIPQ8TAP9 179 aa8.61□□□□□ -1.03
SSBP1-207ENST00000468267 A8MWP4 228 aa8.6□□□□□ -1.03
SSBP1-207ENST00000468267 FAM236DA0A1B0GTK5 79 aa8.59□□□□□ -1.03
SSBP1-207ENST00000468267 C9orf118A6NHY6 69 aa8.59□□□□□ -1.03
SSBP1-207ENST00000468267 FAM236CP0DP71 79 aa8.59□□□□□ -1.03
SSBP1-207ENST00000468267 ZCCHC13Q8WW36 166 aaKnown RBP8.59□□□□□ -1.03
SSBP1-207ENST00000468267 Q8N9P0 234 aaPredicted RBP8.58□□□□□ -1.04
SSBP1-207ENST00000468267 RBM12B-AS1Q9P1G2 102 aa8.58□□□□□ -1.04
SSBP1-207ENST00000468267 IGKV3D-7A0A0C4DH55 119 aa8.57□□□□□ -1.04
SSBP1-207ENST00000468267 TAX1BP3O14907 124 aa8.57□□□□□ -1.04
SSBP1-207ENST00000468267 C8orf17Q9NRJ1 99 aa8.57□□□□□ -1.04
SSBP1-207ENST00000468267 A0A1W2PPM0 123 aa8.55□□□□□ -1.04
SSBP1-207ENST00000468267 NREPQ16612 68 aa8.55□□□□□ -1.04
SSBP1-207ENST00000468267 H3BT86 120 aa8.54□□□□□ -1.04
SSBP1-207ENST00000468267 KRTAP9-8Q9BYQ0 159 aa8.54□□□□□ -1.04
SSBP1-207ENST00000468267 PRR15Q8IV56 129 aa8.52□□□□□ -1.05
SSBP1-207ENST00000468267 SPINK7P58062 85 aa8.51□□□□□ -1.05
SSBP1-207ENST00000468267 KRTAP4-11Q9BYQ6 195 aa8.51□□□□□ -1.05
SSBP1-207ENST00000468267 Q6ZVQ6 151 aa8.5□□□□□ -1.05
SSBP1-207ENST00000468267 MTURNQ8N3F0 131 aa8.5□□□□□ -1.05
SSBP1-207ENST00000468267 KRTAP9-7A8MTY7 169 aa8.47□□□□□ -1.05
SSBP1-207ENST00000468267 MMP24-AS1A0A0U1RRL7 71 aa8.44□□□□□ -1.06
SSBP1-207ENST00000468267 TMEM254Q8TBM7 123 aa8.44□□□□□ -1.06
SSBP1-207ENST00000468267 MRPL34Q9BQ48 92 aaKnown RBP8.42□□□□□ -1.06
SSBP1-207ENST00000468267 SPCS1Q9Y6A9 102 aa8.42□□□□□ -1.06
SSBP1-207ENST00000468267 K7EQZ3 153 aa8.41□□□□□ -1.06
SSBP1-207ENST00000468267 MT2AP02795 61 aa8.41□□□□□ -1.06
SSBP1-207ENST00000468267 hDV103S1A0JD37 113 aa8.4□□□□□ -1.06
SSBP1-207ENST00000468267 BPY2O14599 106 aa8.39□□□□□ -1.07
SSBP1-207ENST00000468267 KRTAP19-4Q3LI73 84 aa8.37□□□□□ -1.07
SSBP1-207ENST00000468267 WFDC13Q8IUB5 93 aa8.37□□□□□ -1.07
SSBP1-207ENST00000468267 USH2AO75445 5202 aa8.36□□□□□ -1.07
SSBP1-207ENST00000468267 COL5A1-AS1Q5SY13 56 aa8.35□□□□□ -1.07
SSBP1-207ENST00000468267 NDUFS5O43920 106 aa8.34□□□□□ -1.07
SSBP1-207ENST00000468267 MT1FP04733 61 aa8.34□□□□□ -1.07
SSBP1-207ENST00000468267 KRTAP10-10P60014 251 aa8.31□□□□□ -1.08
SSBP1-207ENST00000468267 PRO0461Q9UI25 63 aa8.31□□□□□ -1.08
SSBP1-207ENST00000468267 LCE5AQ5TCM9 118 aa8.3□□□□□ -1.08
SSBP1-207ENST00000468267 Q8N9L7 120 aa8.29□□□□□ -1.08
SSBP1-207ENST00000468267 SSPOA2VEC9 5147 aa8.29□□□□□ -1.08
SSBP1-207ENST00000468267 K7EP34 96 aa8.28□□□□□ -1.08
SSBP1-207ENST00000468267 KRTAP9-3Q9BYQ3 159 aa8.28□□□□□ -1.08
SSBP1-207ENST00000468267 Q5W150 140 aa8.27□□□□□ -1.09
SSBP1-207ENST00000468267 CASC2Q6XLA1 102 aa8.27□□□□□ -1.09
SSBP1-207ENST00000468267 LINC00846Q9NV44 126 aa8.25□□□□□ -1.09
SSBP1-207ENST00000468267 IGKV2D-30A0A075B6S6 120 aa8.23□□□□□ -1.09
SSBP1-207ENST00000468267 IGKV2-30P06310 120 aa8.23□□□□□ -1.09
SSBP1-207ENST00000468267 UBL5Q9BZL1 73 aa8.23□□□□□ -1.09
SSBP1-207ENST00000468267 HCG22E2RYF7 251 aa8.22□□□□□ -1.09
SSBP1-207ENST00000468267 H1FX-AS1Q4G0G2 97 aa8.22□□□□□ -1.09
SSBP1-207ENST00000468267 C7orf65Q6ZTY9 151 aa8.21□□□□□ -1.1
SSBP1-207ENST00000468267 CXCL6P80162 114 aa8.18□□□□□ -1.1
SSBP1-207ENST00000468267 GTF2H5Q6ZYL4 71 aa8.17□□□□□ -1.1
SSBP1-207ENST00000468267 F8W1H4 67 aa8.14□□□□□ -1.11
SSBP1-207ENST00000468267 PCP4L1A6NKN8 68 aa8.11□□□□□ -1.11
SSBP1-207ENST00000468267 FCGBPQ9Y6R7 5405 aaPredicted RBP8.1□□□□□ -1.11
SSBP1-207ENST00000468267 ETDBQ3ZM63 59 aa8.1□□□□□ -1.11
SSBP1-207ENST00000468267 C4orf26Q17RF5 130 aa8.09□□□□□ -1.11
SSBP1-207ENST00000468267 TP53AIP1Q9HCN2 124 aa8.03□□□□□ -1.12
SSBP1-207ENST00000468267 KRTAP3-1Q9BYR8 98 aa7.99□□□□□ -1.13
SSBP1-207ENST00000468267 C1orf64Q8NEQ6 169 aa7.95□□□□□ -1.14
SSBP1-207ENST00000468267 KRTAP19-6Q3LI70 58 aa7.94□□□□□ -1.14
SSBP1-207ENST00000468267 ACYP1P07311 99 aa7.93□□□□□ -1.14
SSBP1-207ENST00000468267 C5orf47Q569G3 176 aa7.93□□□□□ -1.14
SSBP1-207ENST00000468267 H3BS24 57 aa7.92□□□□□ -1.14
SSBP1-207ENST00000468267 S4R3F8 94 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms