RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 SS18L2Q9UHA2 77 aa1.86□□□□□ -2.11
SSR3-204ENST00000467733 SPRR2DP22532 72 aa1.85□□□□□ -2.11
SSR3-204ENST00000467733 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
SSR3-204ENST00000467733 TTTY13Q9BZ97 58 aa1.85□□□□□ -2.11
SSR3-204ENST00000467733 NHP2Q9NX24 153 aaKnown RBP1.85□□□□□ -2.11
SSR3-204ENST00000467733 TRAV13-2A0A0B4J235 113 aa1.84□□□□□ -2.11
SSR3-204ENST00000467733 FABP4P15090 132 aa1.84□□□□□ -2.11
SSR3-204ENST00000467733 COX19Q49B96 90 aa1.84□□□□□ -2.11
SSR3-204ENST00000467733 CLLU1Q5K131 121 aa1.84□□□□□ -2.11
SSR3-204ENST00000467733 LINC00308Q8TCZ7 52 aa1.84□□□□□ -2.11
SSR3-204ENST00000467733 A0A1W2PNM2 257 aa1.83□□□□□ -2.12
SSR3-204ENST00000467733 HSBP1O75506 76 aa1.83□□□□□ -2.12
SSR3-204ENST00000467733 PLNP26678 52 aa1.83□□□□□ -2.12
SSR3-204ENST00000467733 KRTAP19-8Q3LI54 63 aa1.83□□□□□ -2.12
SSR3-204ENST00000467733 SIGMAR1Q99720 223 aa1.83□□□□□ -2.12
SSR3-204ENST00000467733 COLCA2A8K830 154 aa1.82□□□□□ -2.12
SSR3-204ENST00000467733 TIMM17BO60830 172 aa1.82□□□□□ -2.12
SSR3-204ENST00000467733 APOC3P02656 99 aa1.82□□□□□ -2.12
SSR3-204ENST00000467733 LINC00313P59037 77 aa1.82□□□□□ -2.12
SSR3-204ENST00000467733 OCIAD2Q56VL3 154 aa1.82□□□□□ -2.12
SSR3-204ENST00000467733 WFDC13Q8IUB5 93 aa1.82□□□□□ -2.12
SSR3-204ENST00000467733 SLC7A5P1Q8MH63 180 aa1.82□□□□□ -2.12
SSR3-204ENST00000467733 CHCHD1Q96BP2 118 aaKnown RBP1.82□□□□□ -2.12
SSR3-204ENST00000467733 DPM2O94777 84 aa1.81□□□□□ -2.12
SSR3-204ENST00000467733 LEPROTL1O95214 131 aa1.81□□□□□ -2.12
SSR3-204ENST00000467733 IGKCP01834 107 aa1.81□□□□□ -2.12
SSR3-204ENST00000467733 TRGC2P03986 189 aa1.81□□□□□ -2.12
SSR3-204ENST00000467733 SPINK7P58062 85 aa1.81□□□□□ -2.12
SSR3-204ENST00000467733 UQCC3Q6UW78 93 aa1.81□□□□□ -2.12
SSR3-204ENST00000467733 A6NDN8 102 aa1.8□□□□□ -2.12
SSR3-204ENST00000467733 H3BUT2 72 aa1.8□□□□□ -2.12
SSR3-204ENST00000467733 Q6ZQY7 126 aa1.8□□□□□ -2.12
SSR3-204ENST00000467733 ZCCHC13Q8WW36 166 aaKnown RBP1.8□□□□□ -2.12
SSR3-204ENST00000467733 YPEL4Q96NS1 127 aa1.8□□□□□ -2.12
SSR3-204ENST00000467733 SPRR2GQ9BYE4 73 aa1.8□□□□□ -2.12
SSR3-204ENST00000467733 A0A087WSZ3 146 aa1.79□□□□□ -2.12
SSR3-204ENST00000467733 LINC00575Q6W349 94 aa1.79□□□□□ -2.12
SSR3-204ENST00000467733 TEN1Q86WV5 123 aa1.79□□□□□ -2.12
SSR3-204ENST00000467733 PPDPFLQ8WWR9 84 aa1.79□□□□□ -2.12
SSR3-204ENST00000467733 HSPB8Q9UJY1 196 aa1.79□□□□□ -2.12
SSR3-204ENST00000467733 hADV29S1A0JD25 119 aa1.78□□□□□ -2.12
SSR3-204ENST00000467733 H1FX-AS1Q4G0G2 97 aa1.78□□□□□ -2.12
SSR3-204ENST00000467733 KRTAP8-1Q8IUC2 63 aa1.78□□□□□ -2.12
SSR3-204ENST00000467733 MUSTN1Q8IVN3 82 aa1.78□□□□□ -2.12
SSR3-204ENST00000467733 SMIM11BQ8TCY0 68 aa1.78□□□□□ -2.12
SSR3-204ENST00000467733 IMUPQ9GZP8 106 aa1.78□□□□□ -2.12
SSR3-204ENST00000467733 AHNAK2Q8IVF2 5795 aa1.77□□□□□ -2.13
SSR3-204ENST00000467733 FAM236AA0A1B0GUQ0 79 aa1.77□□□□□ -2.13
SSR3-204ENST00000467733 FAM236BA0A1B0GV22 79 aa1.77□□□□□ -2.13
SSR3-204ENST00000467733 IGKV4-1P06312 121 aa1.77□□□□□ -2.13
SSR3-204ENST00000467733 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.77□□□□□ -2.13
SSR3-204ENST00000467733 ATOH7Q8N100 152 aa1.77□□□□□ -2.13
SSR3-204ENST00000467733 COPS9Q8WXC6 57 aa1.77□□□□□ -2.13
SSR3-204ENST00000467733 SNHG12Q9BXW3 62 aa1.77□□□□□ -2.13
SSR3-204ENST00000467733 IGHV6-1A0A0B4J1U7 121 aa1.76□□□□□ -2.13
SSR3-204ENST00000467733 SYS1-DBNDD2H3BUS1 97 aa1.76□□□□□ -2.13
SSR3-204ENST00000467733 VAMP3Q15836 100 aa1.76□□□□□ -2.13
SSR3-204ENST00000467733 SCGB1D4Q6XE38 83 aa1.76□□□□□ -2.13
SSR3-204ENST00000467733 SVBPQ8N300 66 aa1.76□□□□□ -2.13
SSR3-204ENST00000467733 A0A1B0GV72 72 aa1.75□□□□□ -2.13
SSR3-204ENST00000467733 C8orf87E5RJ46 101 aa1.75□□□□□ -2.13
SSR3-204ENST00000467733 C3orf79P0CE67 100 aa1.75□□□□□ -2.13
SSR3-204ENST00000467733 IFITM1P13164 125 aa1.75□□□□□ -2.13
SSR3-204ENST00000467733 C12orf57Q99622 126 aa1.75□□□□□ -2.13
SSR3-204ENST00000467733 KRTDAPP60985 99 aa1.74□□□□□ -2.13
SSR3-204ENST00000467733 NDUFA5Q16718 116 aa1.74□□□□□ -2.13
SSR3-204ENST00000467733 LINC01545Q5VT33 79 aa1.74□□□□□ -2.13
SSR3-204ENST00000467733 RAB37Q96AX2 223 aa1.74□□□□□ -2.13
SSR3-204ENST00000467733 A0A1B0GVX0 72 aa1.73□□□□□ -2.13
SSR3-204ENST00000467733 PCP4L1A6NKN8 68 aa1.73□□□□□ -2.13
SSR3-204ENST00000467733 DSCR8Q96T75 97 aa1.73□□□□□ -2.13
SSR3-204ENST00000467733 LINC00472Q9H8W2 130 aa1.73□□□□□ -2.13
SSR3-204ENST00000467733 HMCN1Q96RW7 5635 aa1.72□□□□□ -2.13
SSR3-204ENST00000467733 HIST1H2BKO60814 126 aa1.72□□□□□ -2.13
SSR3-204ENST00000467733 HIST1H2BJP06899 126 aa1.72□□□□□ -2.13
SSR3-204ENST00000467733 HIST1H2BOP23527 126 aa1.72□□□□□ -2.13
SSR3-204ENST00000467733 HIST1H2BBP33778 126 aa1.72□□□□□ -2.13
SSR3-204ENST00000467733 HIST1H2BDP58876 126 aa1.72□□□□□ -2.13
SSR3-204ENST00000467733 HIST1H2BCP62807 126 aa1.72□□□□□ -2.13
SSR3-204ENST00000467733 HIST2H2BEQ16778 126 aa1.72□□□□□ -2.13
SSR3-204ENST00000467733 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.72□□□□□ -2.13
SSR3-204ENST00000467733 Q5W150 140 aa1.72□□□□□ -2.13
SSR3-204ENST00000467733 HIST1H2BHQ93079 126 aa1.72□□□□□ -2.13
SSR3-204ENST00000467733 HIST1H2BNQ99877 126 aa1.72□□□□□ -2.13
SSR3-204ENST00000467733 HIST1H2BMQ99879 126 aa1.72□□□□□ -2.13
SSR3-204ENST00000467733 DSTQ03001 7570 aaKnown RBP1.72□□□□□ -2.13
SSR3-204ENST00000467733 IGKV3D-7A0A0C4DH55 119 aa1.71□□□□□ -2.14
SSR3-204ENST00000467733 TRBV7-4A0A0J9YYF1 115 aa1.71□□□□□ -2.14
SSR3-204ENST00000467733 KLKP1Q107X0 134 aa1.71□□□□□ -2.14
SSR3-204ENST00000467733 PRO2289Q9P1D8 64 aa1.71□□□□□ -2.14
SSR3-204ENST00000467733 H3BMG7 143 aa1.7□□□□□ -2.14
SSR3-204ENST00000467733 MT1XP80297 61 aa1.7□□□□□ -2.14
SSR3-204ENST00000467733 BVES-AS1Q5T3Y7 98 aa1.7□□□□□ -2.14
SSR3-204ENST00000467733 LYRM7Q5U5X0 104 aa1.7□□□□□ -2.14
SSR3-204ENST00000467733 KRTAP5-10Q6L8G5 202 aa1.7□□□□□ -2.14
SSR3-204ENST00000467733 FABP2P12104 132 aa1.69□□□□□ -2.14
SSR3-204ENST00000467733 PRR15Q8IV56 129 aa1.69□□□□□ -2.14
SSR3-204ENST00000467733 SNCGO76070 127 aa1.68□□□□□ -2.14
SSR3-204ENST00000467733 TRACP01848 142 aa1.68□□□□□ -2.14
SSR3-204ENST00000467733 CRIPTQ9P021 101 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms