RNA–Protein interactions for RNA: ENST00000466935.1

SDF2L1-202, Transcript of stromal cell derived factor 2 like 1, humanhuman

TSL 2

Gene SDF2L1, Length 601 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-202ENST00000466935 ATXN8Q156A1 80 aa12.63□□□□□ -0.39
SDF2L1-202ENST00000466935 Q6ZQT0 140 aa12.63□□□□□ -0.39
SDF2L1-202ENST00000466935 MPLKIPQ8TAP9 179 aa12.63□□□□□ -0.39
SDF2L1-202ENST00000466935 A0A1B0GW54 56 aa12.61□□□□□ -0.39
SDF2L1-202ENST00000466935 JMJD7-PLA2G4BH0Y9G9 81 aa12.61□□□□□ -0.39
SDF2L1-202ENST00000466935 RBM12B-AS1Q9P1G2 102 aa12.61□□□□□ -0.39
SDF2L1-202ENST00000466935 FAM236DA0A1B0GTK5 79 aa12.6□□□□□ -0.39
SDF2L1-202ENST00000466935 FAM236CP0DP71 79 aa12.6□□□□□ -0.39
SDF2L1-202ENST00000466935 HRES1P13985 223 aa12.6□□□□□ -0.39
SDF2L1-202ENST00000466935 KRTAP9-8Q9BYQ0 159 aa12.59□□□□□ -0.39
SDF2L1-202ENST00000466935 LOC110117498A0A087WWA1 95 aa12.56□□□□□ -0.4
SDF2L1-202ENST00000466935 PDE6GP18545 87 aa12.56□□□□□ -0.4
SDF2L1-202ENST00000466935 NDUFB1O75438 58 aa12.55□□□□□ -0.4
SDF2L1-202ENST00000466935 SMIM6P0DI80 62 aa12.53□□□□□ -0.4
SDF2L1-202ENST00000466935 ZCCHC13Q8WW36 166 aaKnown RBP12.53□□□□□ -0.4
SDF2L1-202ENST00000466935 NAA38Q9BRA0 125 aaKnown RBP12.52□□□□□ -0.41
SDF2L1-202ENST00000466935 LYRM7Q5U5X0 104 aa12.51□□□□□ -0.41
SDF2L1-202ENST00000466935 Q8N9P0 234 aaPredicted RBP12.49□□□□□ -0.41
SDF2L1-202ENST00000466935 A8MWP4 228 aa12.48□□□□□ -0.41
SDF2L1-202ENST00000466935 MTURNQ8N3F0 131 aa12.45□□□□□ -0.42
SDF2L1-202ENST00000466935 C8orf17Q9NRJ1 99 aa12.44□□□□□ -0.42
SDF2L1-202ENST00000466935 C14orf132Q9NPU4 83 aa12.43□□□□□ -0.42
SDF2L1-202ENST00000466935 SPINK7P58062 85 aa12.41□□□□□ -0.42
SDF2L1-202ENST00000466935 IGKV3D-7A0A0C4DH55 119 aa12.39□□□□□ -0.43
SDF2L1-202ENST00000466935 MT2AP02795 61 aa12.39□□□□□ -0.43
SDF2L1-202ENST00000466935 TSTD3H0UI37 97 aa12.38□□□□□ -0.43
SDF2L1-202ENST00000466935 PRR15Q8IV56 129 aa12.35□□□□□ -0.43
SDF2L1-202ENST00000466935 NREPQ16612 68 aa12.34□□□□□ -0.43
SDF2L1-202ENST00000466935 Q6ZVQ6 151 aa12.34□□□□□ -0.43
SDF2L1-202ENST00000466935 BATFQ16520 125 aa12.3□□□□□ -0.44
SDF2L1-202ENST00000466935 H3BT86 120 aa12.29□□□□□ -0.44
SDF2L1-202ENST00000466935 MT1FP04733 61 aa12.28□□□□□ -0.44
SDF2L1-202ENST00000466935 C9orf118A6NHY6 69 aa12.26□□□□□ -0.45
SDF2L1-202ENST00000466935 TMEM254Q8TBM7 123 aa12.26□□□□□ -0.45
SDF2L1-202ENST00000466935 MMP24-AS1A0A0U1RRL7 71 aa12.24□□□□□ -0.45
SDF2L1-202ENST00000466935 WFDC13Q8IUB5 93 aa12.24□□□□□ -0.45
SDF2L1-202ENST00000466935 KRTAP10-10P60014 251 aa12.23□□□□□ -0.45
SDF2L1-202ENST00000466935 MRPL34Q9BQ48 92 aaKnown RBP12.23□□□□□ -0.45
SDF2L1-202ENST00000466935 A0A1W2PPM0 123 aa12.21□□□□□ -0.45
SDF2L1-202ENST00000466935 KRTAP9-3Q9BYQ3 159 aa12.2□□□□□ -0.46
SDF2L1-202ENST00000466935 TAX1BP3O14907 124 aa12.19□□□□□ -0.46
SDF2L1-202ENST00000466935 hDV103S1A0JD37 113 aa12.17□□□□□ -0.46
SDF2L1-202ENST00000466935 USH2AO75445 5202 aa12.16□□□□□ -0.46
SDF2L1-202ENST00000466935 K7EQZ3 153 aa12.16□□□□□ -0.46
SDF2L1-202ENST00000466935 LCE2BO14633 110 aa12.14□□□□□ -0.47
SDF2L1-202ENST00000466935 BPY2O14599 106 aa12.11□□□□□ -0.47
SDF2L1-202ENST00000466935 LOC105371267A0A1B0GV96 52 aa12.1□□□□□ -0.47
SDF2L1-202ENST00000466935 NDUFS5O43920 106 aa12.08□□□□□ -0.48
SDF2L1-202ENST00000466935 SSPOA2VEC9 5147 aa12.06□□□□□ -0.48
SDF2L1-202ENST00000466935 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.04□□□□□ -0.48
SDF2L1-202ENST00000466935 H1FX-AS1Q4G0G2 97 aa12.01□□□□□ -0.49
SDF2L1-202ENST00000466935 SPCS1Q9Y6A9 102 aa12.01□□□□□ -0.49
SDF2L1-202ENST00000466935 C7orf65Q6ZTY9 151 aa11.97□□□□□ -0.49
SDF2L1-202ENST00000466935 KRTAP19-1Q8IUB9 90 aa11.97□□□□□ -0.49
SDF2L1-202ENST00000466935 CASC2Q6XLA1 102 aa11.96□□□□□ -0.49
SDF2L1-202ENST00000466935 Q5W150 140 aa11.95□□□□□ -0.5
SDF2L1-202ENST00000466935 IGKV2D-30A0A075B6S6 120 aa11.94□□□□□ -0.5
SDF2L1-202ENST00000466935 IGKV2-30P06310 120 aa11.94□□□□□ -0.5
SDF2L1-202ENST00000466935 SMCPP49901 116 aaPredicted RBP11.94□□□□□ -0.5
SDF2L1-202ENST00000466935 Q8N9L7 120 aa11.93□□□□□ -0.5
SDF2L1-202ENST00000466935 KRTAP9-7A8MTY7 169 aa11.92□□□□□ -0.5
SDF2L1-202ENST00000466935 HCG22E2RYF7 251 aa11.89□□□□□ -0.51
SDF2L1-202ENST00000466935 CXCL6P80162 114 aa11.88□□□□□ -0.51
SDF2L1-202ENST00000466935 COL5A1-AS1Q5SY13 56 aa11.87□□□□□ -0.51
SDF2L1-202ENST00000466935 UBL5Q9BZL1 73 aa11.87□□□□□ -0.51
SDF2L1-202ENST00000466935 FCGBPQ9Y6R7 5405 aaPredicted RBP11.86□□□□□ -0.51
SDF2L1-202ENST00000466935 PRO0461Q9UI25 63 aa11.85□□□□□ -0.51
SDF2L1-202ENST00000466935 LINC00846Q9NV44 126 aa11.84□□□□□ -0.51
SDF2L1-202ENST00000466935 K7EP34 96 aa11.8□□□□□ -0.52
SDF2L1-202ENST00000466935 KRTAP19-6Q3LI70 58 aa11.78□□□□□ -0.52
SDF2L1-202ENST00000466935 C4orf26Q17RF5 130 aa11.75□□□□□ -0.53
SDF2L1-202ENST00000466935 GTF2H5Q6ZYL4 71 aa11.66□□□□□ -0.54
SDF2L1-202ENST00000466935 TP53AIP1Q9HCN2 124 aa11.64□□□□□ -0.55
SDF2L1-202ENST00000466935 F8W1H4 67 aa11.61□□□□□ -0.55
SDF2L1-202ENST00000466935 KRTAP3-1Q9BYR8 98 aa11.58□□□□□ -0.56
SDF2L1-202ENST00000466935 C5orf47Q569G3 176 aa11.54□□□□□ -0.56
SDF2L1-202ENST00000466935 C1orf64Q8NEQ6 169 aa11.54□□□□□ -0.56
SDF2L1-202ENST00000466935 S4R3F8 94 aa11.54□□□□□ -0.56
SDF2L1-202ENST00000466935 ETDBQ3ZM63 59 aa11.53□□□□□ -0.56
SDF2L1-202ENST00000466935 CSAG1Q6PB30 78 aa11.5□□□□□ -0.57
SDF2L1-202ENST00000466935 MACF1Q9UPN3 7388 aaKnown RBP11.49□□□□□ -0.57
SDF2L1-202ENST00000466935 FAM236AA0A1B0GUQ0 79 aa11.45□□□□□ -0.58
SDF2L1-202ENST00000466935 FAM236BA0A1B0GV22 79 aa11.45□□□□□ -0.58
SDF2L1-202ENST00000466935 LCA10Q71F78 164 aa11.44□□□□□ -0.58
SDF2L1-202ENST00000466935 CYP4F30PQ9H0H9 118 aa11.38□□□□□ -0.59
SDF2L1-202ENST00000466935 PCP4L1A6NKN8 68 aa11.37□□□□□ -0.59
SDF2L1-202ENST00000466935 ACYP1P07311 99 aa11.37□□□□□ -0.59
SDF2L1-202ENST00000466935 TRAV22A0A0B4J277 110 aa11.34□□□□□ -0.59
SDF2L1-202ENST00000466935 SPRR2GQ9BYE4 73 aa11.33□□□□□ -0.6
SDF2L1-202ENST00000466935 LOC101927531A0A1B0GV80 90 aa11.32□□□□□ -0.6
SDF2L1-202ENST00000466935 FAM240AA0A1B0GVK7 77 aa11.31□□□□□ -0.6
SDF2L1-202ENST00000466935 ATP5EP2Q5VTU8 51 aa11.31□□□□□ -0.6
SDF2L1-202ENST00000466935 SYNE2Q8WXH0 6885 aaKnown RBP11.29□□□□□ -0.6
SDF2L1-202ENST00000466935 KRTAP19-8Q3LI54 63 aa11.28□□□□□ -0.6
SDF2L1-202ENST00000466935 KRTAP6-3Q3LI67 103 aa11.27□□□□□ -0.61
SDF2L1-202ENST00000466935 Q5VV11 94 aa11.27□□□□□ -0.61
SDF2L1-202ENST00000466935 KRTAP3-3Q9BYR6 98 aa11.27□□□□□ -0.61
SDF2L1-202ENST00000466935 MT1BP07438 61 aa11.26□□□□□ -0.61
SDF2L1-202ENST00000466935 KLKP1Q107X0 134 aa11.25□□□□□ -0.61
SDF2L1-202ENST00000466935 UQCRQO14949 82 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms