RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 NDUFB1O75438 58 aa7.92□□□□□ -1.14
UBE4B-206ENST00000466379 SPINK6Q6UWN8 80 aa7.92□□□□□ -1.14
UBE4B-206ENST00000466379 MMP24-AS1A0A0U1RRL7 71 aa7.91□□□□□ -1.14
UBE4B-206ENST00000466379 H7BZZ5 65 aa7.91□□□□□ -1.14
UBE4B-206ENST00000466379 TMEM258P61165 79 aa7.91□□□□□ -1.14
UBE4B-206ENST00000466379 Q75L30 129 aa7.91□□□□□ -1.14
UBE4B-206ENST00000466379 IGHV6-1A0A0B4J1U7 121 aa7.9□□□□□ -1.15
UBE4B-206ENST00000466379 A0A0U1RQV1 116 aa7.9□□□□□ -1.15
UBE4B-206ENST00000466379 FAM229BQ4G0N7 80 aa7.9□□□□□ -1.15
UBE4B-206ENST00000466379 FAT1Q14517 4588 aa7.89□□□□□ -1.15
UBE4B-206ENST00000466379 CDK2AP2O75956 126 aa7.87□□□□□ -1.15
UBE4B-206ENST00000466379 A0A1B0GVX0 72 aa7.87□□□□□ -1.15
UBE4B-206ENST00000466379 hDV103S1A0JD37 113 aa7.86□□□□□ -1.15
UBE4B-206ENST00000466379 NOTCH2NLQ7Z3S9 236 aa7.86□□□□□ -1.15
UBE4B-206ENST00000466379 C8orf17Q9NRJ1 99 aa7.86□□□□□ -1.15
UBE4B-206ENST00000466379 Q5XG85 94 aa7.85□□□□□ -1.15
UBE4B-206ENST00000466379 RYR3Q15413 4870 aa7.84□□□□□ -1.16
UBE4B-206ENST00000466379 TYMSOSQ8TAI1 123 aa7.82□□□□□ -1.16
UBE4B-206ENST00000466379 C8orf87E5RJ46 101 aa7.81□□□□□ -1.16
UBE4B-206ENST00000466379 NDUFC1O43677 76 aa7.81□□□□□ -1.16
UBE4B-206ENST00000466379 ASB16-AS1Q495Z4 193 aa7.81□□□□□ -1.16
UBE4B-206ENST00000466379 KRTAP10-4P60372 401 aaPredicted RBP7.8□□□□□ -1.16
UBE4B-206ENST00000466379 ZCCHC13Q8WW36 166 aaKnown RBP7.8□□□□□ -1.16
UBE4B-206ENST00000466379 H0Y9P7 68 aa7.78□□□□□ -1.16
UBE4B-206ENST00000466379 NDUFS5O43920 106 aa7.77□□□□□ -1.17
UBE4B-206ENST00000466379 MP68P56378 58 aa7.77□□□□□ -1.17
UBE4B-206ENST00000466379 LINC00208Q96KT6 92 aa7.77□□□□□ -1.17
UBE4B-206ENST00000466379 MRPL34Q9BQ48 92 aaKnown RBP7.76□□□□□ -1.17
UBE4B-206ENST00000466379 RBM12B-AS1Q9P1G2 102 aa7.75□□□□□ -1.17
UBE4B-206ENST00000466379 LIMD2Q9BT23 127 aa7.74□□□□□ -1.17
UBE4B-206ENST00000466379 TRAV22A0A0B4J277 110 aa7.73□□□□□ -1.17
UBE4B-206ENST00000466379 LINC00304Q8N9R0 145 aa7.71□□□□□ -1.17
UBE4B-206ENST00000466379 SPINK1P00995 79 aa7.71□□□□□ -1.18
UBE4B-206ENST00000466379 C1orf64Q8NEQ6 169 aa7.7□□□□□ -1.18
UBE4B-206ENST00000466379 TP53AIP1Q9HCN2 124 aa7.7□□□□□ -1.18
UBE4B-206ENST00000466379 LINC00313P59037 77 aa7.69□□□□□ -1.18
UBE4B-206ENST00000466379 PRR4Q16378 134 aa7.68□□□□□ -1.18
UBE4B-206ENST00000466379 ATP5EP56381 51 aaPredicted RBP7.67□□□□□ -1.18
UBE4B-206ENST00000466379 SERP1Q9Y6X1 66 aa7.67□□□□□ -1.18
UBE4B-206ENST00000466379 HSPG2P98160 4391 aa7.67□□□□□ -1.18
UBE4B-206ENST00000466379 H3BPC8 53 aa7.67□□□□□ -1.18
UBE4B-206ENST00000466379 FAM229AH3BQW9 127 aa7.67□□□□□ -1.18
UBE4B-206ENST00000466379 PKHD1L1Q86WI1 4243 aa7.67□□□□□ -1.18
UBE4B-206ENST00000466379 Q5W150 140 aa7.64□□□□□ -1.19
UBE4B-206ENST00000466379 SPAG11AQ6PDA7 123 aa7.63□□□□□ -1.19
UBE4B-206ENST00000466379 BRK1Q8WUW1 75 aa7.63□□□□□ -1.19
UBE4B-206ENST00000466379 PCOTHQ58A44 107 aa7.62□□□□□ -1.19
UBE4B-206ENST00000466379 RETNLBQ9BQ08 111 aa7.62□□□□□ -1.19
UBE4B-206ENST00000466379 KRTAP16-1A8MUX0 517 aa7.62□□□□□ -1.19
UBE4B-206ENST00000466379 Q5VSD8 79 aa7.62□□□□□ -1.19
UBE4B-206ENST00000466379 RYR1P21817 5038 aa7.62□□□□□ -1.19
UBE4B-206ENST00000466379 RPS29P62273 56 aaKnown RBP7.59□□□□□ -1.19
UBE4B-206ENST00000466379 KRTAP17-1Q9BYP8 105 aa7.59□□□□□ -1.19
UBE4B-206ENST00000466379 LRP1Q07954 4544 aaKnown RBP7.59□□□□□ -1.19
UBE4B-206ENST00000466379 SEC61BP60468 96 aaKnown RBP7.59□□□□□ -1.19
UBE4B-206ENST00000466379 KRTAP13-3Q3SY46 172 aa7.59□□□□□ -1.19
UBE4B-206ENST00000466379 Q8N9P0 234 aaPredicted RBP7.59□□□□□ -1.19
UBE4B-206ENST00000466379 CYP4F30PQ9H0H9 118 aa7.55□□□□□ -1.2
UBE4B-206ENST00000466379 KIAA1109Q2LD37 5005 aa7.54□□□□□ -1.2
UBE4B-206ENST00000466379 EPPK1P58107 5090 aaKnown RBP7.54□□□□□ -1.2
UBE4B-206ENST00000466379 SPANXA2-OT1Q8N9U9 137 aa7.53□□□□□ -1.2
UBE4B-206ENST00000466379 TNXBP22105 4242 aa7.52□□□□□ -1.21
UBE4B-206ENST00000466379 LOC101927531A0A1B0GV80 90 aa7.52□□□□□ -1.21
UBE4B-206ENST00000466379 C9orf92A6NGG3 77 aa7.51□□□□□ -1.21
UBE4B-206ENST00000466379 Q8N1X5 172 aa7.51□□□□□ -1.21
UBE4B-206ENST00000466379 FP248Q71RG6 208 aaPredicted RBP7.5□□□□□ -1.21
UBE4B-206ENST00000466379 IGLV7-46A0A075B6I9 117 aa7.5□□□□□ -1.21
UBE4B-206ENST00000466379 SMIM26A0A096LP01 95 aa7.5□□□□□ -1.21
UBE4B-206ENST00000466379 FAT3Q8TDW7 4589 aa7.48□□□□□ -1.21
UBE4B-206ENST00000466379 KRTAP10-8P60410 259 aa7.47□□□□□ -1.21
UBE4B-206ENST00000466379 FLG2Q5D862 2391 aaPredicted RBP7.47□□□□□ -1.21
UBE4B-206ENST00000466379 KTN1-AS1Q86SY8 53 aa7.45□□□□□ -1.22
UBE4B-206ENST00000466379 MPLKIPQ8TAP9 179 aa7.45□□□□□ -1.22
UBE4B-206ENST00000466379 IGKV2-30P06310 120 aa7.44□□□□□ -1.22
UBE4B-206ENST00000466379 A8MUN3 132 aa7.43□□□□□ -1.22
UBE4B-206ENST00000466379 IGKV2D-30A0A075B6S6 120 aa7.43□□□□□ -1.22
UBE4B-206ENST00000466379 MYCBP2O75592 4640 aa7.41□□□□□ -1.22
UBE4B-206ENST00000466379 HRES1P13985 223 aa7.41□□□□□ -1.22
UBE4B-206ENST00000466379 COA5Q86WW8 74 aa7.4□□□□□ -1.22
UBE4B-206ENST00000466379 KRTAP3-3Q9BYR6 98 aa7.39□□□□□ -1.23
UBE4B-206ENST00000466379 KRTAP3-2Q9BYR7 98 aa7.39□□□□□ -1.23
UBE4B-206ENST00000466379 C20orf166-AS1Q96NR2 134 aa7.36□□□□□ -1.23
UBE4B-206ENST00000466379 A8MUU9 505 aa7.36□□□□□ -1.23
UBE4B-206ENST00000466379 MT1HL1P0DM35 61 aa7.34□□□□□ -1.23
UBE4B-206ENST00000466379 DMBT1Q9UGM3 2413 aaPredicted RBP7.33□□□□□ -1.24
UBE4B-206ENST00000466379 KRTAP4-5Q9BYR2 181 aa7.3□□□□□ -1.24
UBE4B-206ENST00000466379 Q1T7F1 81 aa7.3□□□□□ -1.24
UBE4B-206ENST00000466379 C7orf65Q6ZTY9 151 aa7.3□□□□□ -1.24
UBE4B-206ENST00000466379 PSPHP1O15172 72 aa7.29□□□□□ -1.24
UBE4B-206ENST00000466379 DMAC1Q96GE9 116 aa7.29□□□□□ -1.24
UBE4B-206ENST00000466379 LCA10Q71F78 164 aa7.28□□□□□ -1.24
UBE4B-206ENST00000466379 ACYP2P14621 99 aa7.27□□□□□ -1.25
UBE4B-206ENST00000466379 CHKB-CPT1BH3BT56 60 aa7.2□□□□□ -1.26
UBE4B-206ENST00000466379 SPINK7P58062 85 aa7.2□□□□□ -1.26
UBE4B-206ENST00000466379 XP32Q5T750 250 aa7.2□□□□□ -1.26
UBE4B-206ENST00000466379 PRR15LQ9BU68 103 aa7.18□□□□□ -1.26
UBE4B-206ENST00000466379 RPL37P61927 97 aaKnown RBP7.16□□□□□ -1.26
UBE4B-206ENST00000466379 ATP11AUNQ6ZP68 121 aa7.16□□□□□ -1.26
UBE4B-206ENST00000466379 ABCA13Q86UQ4 5058 aa7.16□□□□□ -1.26
UBE4B-206ENST00000466379 Q5VV11 94 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms