RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 BAALC-AS2P0C853 105 aa5.39□□□□□ -1.55
CD40-204ENST00000466205 IGKV4-1P06312 121 aa5.38□□□□□ -1.55
CD40-204ENST00000466205 RBM3P98179 157 aaKnown RBP5.38□□□□□ -1.55
CD40-204ENST00000466205 KRTAP19-2Q3LHN2 52 aa5.38□□□□□ -1.55
CD40-204ENST00000466205 H3BT86 120 aa5.37□□□□□ -1.55
CD40-204ENST00000466205 ATP11AUNQ6ZP68 121 aa5.37□□□□□ -1.55
CD40-204ENST00000466205 Q75L30 129 aa5.37□□□□□ -1.55
CD40-204ENST00000466205 DSCR8Q96T75 97 aa5.37□□□□□ -1.55
CD40-204ENST00000466205 F8W1H4 67 aa5.36□□□□□ -1.55
CD40-204ENST00000466205 NOTCH2NLQ7Z3S9 236 aa5.34□□□□□ -1.55
CD40-204ENST00000466205 IGHV6-1A0A0B4J1U7 121 aa5.33□□□□□ -1.56
CD40-204ENST00000466205 LINC00313P59037 77 aa5.33□□□□□ -1.56
CD40-204ENST00000466205 MT1HP80294 61 aa5.33□□□□□ -1.56
CD40-204ENST00000466205 COX6B2Q6YFQ2 88 aa5.33□□□□□ -1.56
CD40-204ENST00000466205 C20orf166-AS1Q96NR2 134 aa5.33□□□□□ -1.56
CD40-204ENST00000466205 LINC00472Q9H8W2 130 aa5.33□□□□□ -1.56
CD40-204ENST00000466205 ETDBQ3ZM63 59 aa5.32□□□□□ -1.56
CD40-204ENST00000466205 A8MUU9 505 aa5.31□□□□□ -1.56
CD40-204ENST00000466205 C14orf132Q9NPU4 83 aa5.3□□□□□ -1.56
CD40-204ENST00000466205 KRTAP16-1A8MUX0 517 aa5.29□□□□□ -1.56
CD40-204ENST00000466205 JMJD7-PLA2G4BH0Y9G9 81 aa5.29□□□□□ -1.56
CD40-204ENST00000466205 Q6ZQT0 140 aa5.29□□□□□ -1.56
CD40-204ENST00000466205 M0R2T5 61 aa5.27□□□□□ -1.57
CD40-204ENST00000466205 LOC110117498A0A087WWA1 95 aa5.26□□□□□ -1.57
CD40-204ENST00000466205 A0A1B0GVX0 72 aa5.26□□□□□ -1.57
CD40-204ENST00000466205 C8orf87E5RJ46 101 aa5.24□□□□□ -1.57
CD40-204ENST00000466205 J3KT08 172 aa5.23□□□□□ -1.57
CD40-204ENST00000466205 K7ERU9 68 aa5.23□□□□□ -1.57
CD40-204ENST00000466205 FSIP2Q5CZC0 6907 aa5.22□□□□□ -1.57
CD40-204ENST00000466205 NDUFB1O75438 58 aa5.21□□□□□ -1.58
CD40-204ENST00000466205 PDE6GP18545 87 aa5.21□□□□□ -1.58
CD40-204ENST00000466205 KRTAP10-6P60371 365 aaPredicted RBP5.21□□□□□ -1.58
CD40-204ENST00000466205 NREPQ16612 68 aa5.2□□□□□ -1.58
CD40-204ENST00000466205 CRCT1Q9UGL9 99 aa5.2□□□□□ -1.58
CD40-204ENST00000466205 FLGP20930 4061 aaPredicted RBP5.19□□□□□ -1.58
CD40-204ENST00000466205 IGKV3D-7A0A0C4DH55 119 aa5.19□□□□□ -1.58
CD40-204ENST00000466205 A8MWP4 228 aa5.19□□□□□ -1.58
CD40-204ENST00000466205 J3QR89 54 aa5.19□□□□□ -1.58
CD40-204ENST00000466205 C8orf17Q9NRJ1 99 aa5.19□□□□□ -1.58
CD40-204ENST00000466205 FAM236DA0A1B0GTK5 79 aa5.17□□□□□ -1.58
CD40-204ENST00000466205 A0A1B0GW54 56 aa5.17□□□□□ -1.58
CD40-204ENST00000466205 FAM236CP0DP71 79 aa5.17□□□□□ -1.58
CD40-204ENST00000466205 FAM240AA0A1B0GVK7 77 aa5.16□□□□□ -1.58
CD40-204ENST00000466205 ZCCHC13Q8WW36 166 aaKnown RBP5.16□□□□□ -1.58
CD40-204ENST00000466205 LINC00846Q9NV44 126 aa5.16□□□□□ -1.58
CD40-204ENST00000466205 K7EQZ3 153 aa5.14□□□□□ -1.59
CD40-204ENST00000466205 HRES1P13985 223 aa5.14□□□□□ -1.59
CD40-204ENST00000466205 Q6ZVQ6 151 aa5.14□□□□□ -1.59
CD40-204ENST00000466205 PRR15Q8IV56 129 aa5.14□□□□□ -1.59
CD40-204ENST00000466205 MMP24-AS1A0A0U1RRL7 71 aa5.13□□□□□ -1.59
CD40-204ENST00000466205 Q8N9P0 234 aaPredicted RBP5.13□□□□□ -1.59
CD40-204ENST00000466205 BPY2O14599 106 aa5.12□□□□□ -1.59
CD40-204ENST00000466205 RBM12B-AS1Q9P1G2 102 aa5.12□□□□□ -1.59
CD40-204ENST00000466205 NDUFS5O43920 106 aa5.11□□□□□ -1.59
CD40-204ENST00000466205 ACYP1P07311 99 aa5.11□□□□□ -1.59
CD40-204ENST00000466205 SPINK7P58062 85 aa5.11□□□□□ -1.59
CD40-204ENST00000466205 Q8N9L7 120 aa5.11□□□□□ -1.59
CD40-204ENST00000466205 MRPL34Q9BQ48 92 aaKnown RBP5.11□□□□□ -1.59
CD40-204ENST00000466205 hDV103S1A0JD37 113 aa5.09□□□□□ -1.59
CD40-204ENST00000466205 TMEM254Q8TBM7 123 aa5.09□□□□□ -1.59
CD40-204ENST00000466205 WFDC13Q8IUB5 93 aa5.08□□□□□ -1.6
CD40-204ENST00000466205 MPLKIPQ8TAP9 179 aa5.08□□□□□ -1.6
CD40-204ENST00000466205 LINC00643Q86TS7 51 aa5.04□□□□□ -1.6
CD40-204ENST00000466205 UBL5Q9BZL1 73 aa5.04□□□□□ -1.6
CD40-204ENST00000466205 CASC2Q6XLA1 102 aa5.03□□□□□ -1.6
CD40-204ENST00000466205 KRTAP9-8Q9BYQ0 159 aa5.03□□□□□ -1.6
CD40-204ENST00000466205 HCG22E2RYF7 251 aa5.02□□□□□ -1.61
CD40-204ENST00000466205 MT-ATP8P03928 68 aa5.02□□□□□ -1.61
CD40-204ENST00000466205 IGKV2D-30A0A075B6S6 120 aa5.01□□□□□ -1.61
CD40-204ENST00000466205 IGKV2-30P06310 120 aa5.01□□□□□ -1.61
CD40-204ENST00000466205 Q5W150 140 aa5.01□□□□□ -1.61
CD40-204ENST00000466205 PCP4P48539 62 aa5□□□□□ -1.61
CD40-204ENST00000466205 CXCL6P80162 114 aa5□□□□□ -1.61
CD40-204ENST00000466205 SCGB1A1P11684 91 aa4.99□□□□□ -1.61
CD40-204ENST00000466205 MT2AP02795 61 aa4.98□□□□□ -1.61
CD40-204ENST00000466205 ATP5EP2Q5VTU8 51 aa4.98□□□□□ -1.61
CD40-204ENST00000466205 MT1FP04733 61 aa4.96□□□□□ -1.62
CD40-204ENST00000466205 C7orf65Q6ZTY9 151 aa4.95□□□□□ -1.62
CD40-204ENST00000466205 A0A087WVE0 104 aa4.94□□□□□ -1.62
CD40-204ENST00000466205 KRTAP10-10P60014 251 aa4.93□□□□□ -1.62
CD40-204ENST00000466205 IMUPQ9GZP8 106 aa4.93□□□□□ -1.62
CD40-204ENST00000466205 HIST1H4AP62805 103 aaKnown RBP4.91□□□□□ -1.62
CD40-204ENST00000466205 C4orf26Q17RF5 130 aa4.91□□□□□ -1.62
CD40-204ENST00000466205 USH2AO75445 5202 aa4.91□□□□□ -1.62
CD40-204ENST00000466205 H1FX-AS1Q4G0G2 97 aa4.9□□□□□ -1.63
CD40-204ENST00000466205 SSPOA2VEC9 5147 aa4.9□□□□□ -1.63
CD40-204ENST00000466205 KRTAP9-7A8MTY7 169 aa4.88□□□□□ -1.63
CD40-204ENST00000466205 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.86□□□□□ -1.63
CD40-204ENST00000466205 KRTAP9-3Q9BYQ3 159 aa4.86□□□□□ -1.63
CD40-204ENST00000466205 FAM236AA0A1B0GUQ0 79 aa4.84□□□□□ -1.63
CD40-204ENST00000466205 FAM236BA0A1B0GV22 79 aa4.84□□□□□ -1.63
CD40-204ENST00000466205 ANAPC13Q9BS18 74 aa4.83□□□□□ -1.64
CD40-204ENST00000466205 TP53AIP1Q9HCN2 124 aa4.83□□□□□ -1.64
CD40-204ENST00000466205 OCR1Q9BZK8 76 aa4.82□□□□□ -1.64
CD40-204ENST00000466205 C1orf64Q8NEQ6 169 aa4.81□□□□□ -1.64
CD40-204ENST00000466205 KRTAP3-1Q9BYR8 98 aa4.81□□□□□ -1.64
CD40-204ENST00000466205 C5orf47Q569G3 176 aa4.8□□□□□ -1.64
CD40-204ENST00000466205 FCGBPQ9Y6R7 5405 aaPredicted RBP4.77□□□□□ -1.65
CD40-204ENST00000466205 TRAV22A0A0B4J277 110 aa4.77□□□□□ -1.65
CD40-204ENST00000466205 S4R3F8 94 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms