RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 RETNLBQ9BQ08 111 aa8.31□□□□□ -1.08
TGFBR3-204ENST00000465892 KRTAP13-1Q8IUC0 172 aa8.3□□□□□ -1.08
TGFBR3-204ENST00000465892 C8orf87E5RJ46 101 aa8.29□□□□□ -1.08
TGFBR3-204ENST00000465892 DNAH3Q8TD57 4116 aa8.28□□□□□ -1.08
TGFBR3-204ENST00000465892 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.28□□□□□ -1.08
TGFBR3-204ENST00000465892 KRTAP24-1Q3LI83 254 aa8.26□□□□□ -1.09
TGFBR3-204ENST00000465892 WWC2-AS2Q96NR7 200 aa8.24□□□□□ -1.09
TGFBR3-204ENST00000465892 ACYP2P14621 99 aa8.23□□□□□ -1.09
TGFBR3-204ENST00000465892 C14orf177Q52M58 125 aa8.23□□□□□ -1.09
TGFBR3-204ENST00000465892 DNAH8Q96JB1 4490 aa8.23□□□□□ -1.09
TGFBR3-204ENST00000465892 A0A1B0GU69 56 aa8.22□□□□□ -1.09
TGFBR3-204ENST00000465892 ALMS1Q8TCU4 4167 aa8.2□□□□□ -1.1
TGFBR3-204ENST00000465892 PLECQ15149 4684 aaKnown RBP8.19□□□□□ -1.1
TGFBR3-204ENST00000465892 CIRBP-AS1Q8TBR5 109 aa8.19□□□□□ -1.1
TGFBR3-204ENST00000465892 PSORS1C2Q9UIG4 136 aa8.19□□□□□ -1.1
TGFBR3-204ENST00000465892 KRTAP13-3Q3SY46 172 aa8.17□□□□□ -1.1
TGFBR3-204ENST00000465892 LINC00483Q53H64 154 aa8.17□□□□□ -1.1
TGFBR3-204ENST00000465892 C4orf48Q5BLP8 95 aa8.15□□□□□ -1.1
TGFBR3-204ENST00000465892 SPACA4Q8TDM5 124 aa8.15□□□□□ -1.11
TGFBR3-204ENST00000465892 LINC01554Q52M75 96 aa8.14□□□□□ -1.11
TGFBR3-204ENST00000465892 APLNQ9ULZ1 77 aa8.14□□□□□ -1.11
TGFBR3-204ENST00000465892 PLA2G1BP04054 148 aaKnown RBP8.14□□□□□ -1.11
TGFBR3-204ENST00000465892 MEGF8Q7Z7M0 2845 aa8.13□□□□□ -1.11
TGFBR3-204ENST00000465892 TGP01266 2768 aa8.13□□□□□ -1.11
TGFBR3-204ENST00000465892 MIR22HGQ0VDD5 57 aa8.12□□□□□ -1.11
TGFBR3-204ENST00000465892 DMAC1Q96GE9 116 aa8.12□□□□□ -1.11
TGFBR3-204ENST00000465892 ZNF706Q9Y5V0 76 aaPredicted RBP8.12□□□□□ -1.11
TGFBR3-204ENST00000465892 NBDYA0A0U1RRE5 68 aa8.1□□□□□ -1.11
TGFBR3-204ENST00000465892 HECTD4Q9Y4D8 3996 aa8.1□□□□□ -1.11
TGFBR3-204ENST00000465892 IGLV5-52A0A0A0MRZ9 124 aa8.09□□□□□ -1.11
TGFBR3-204ENST00000465892 RTL8CO15255 209 aa8.09□□□□□ -1.11
TGFBR3-204ENST00000465892 SPATA8Q6RVD6 105 aa8.09□□□□□ -1.11
TGFBR3-204ENST00000465892 DNAH17Q9UFH2 4485 aa8.09□□□□□ -1.11
TGFBR3-204ENST00000465892 ZNF861PO60384 105 aa8.09□□□□□ -1.12
TGFBR3-204ENST00000465892 FBN3Q75N90 2809 aa8.08□□□□□ -1.12
TGFBR3-204ENST00000465892 CSAG1Q6PB30 78 aa8.08□□□□□ -1.12
TGFBR3-204ENST00000465892 UQCR11O14957 56 aa8.07□□□□□ -1.12
TGFBR3-204ENST00000465892 Q6ZRN7 208 aaPredicted RBP8.07□□□□□ -1.12
TGFBR3-204ENST00000465892 IGKV2D-30A0A075B6S6 120 aa8.05□□□□□ -1.12
TGFBR3-204ENST00000465892 IGKV2-30P06310 120 aa8.05□□□□□ -1.12
TGFBR3-204ENST00000465892 SPINK1P00995 79 aa8.04□□□□□ -1.12
TGFBR3-204ENST00000465892 KMT2AQ03164 3969 aa8.04□□□□□ -1.12
TGFBR3-204ENST00000465892 H3BS24 57 aa8.02□□□□□ -1.12
TGFBR3-204ENST00000465892 FAM229AH3BQW9 127 aa8□□□□□ -1.13
TGFBR3-204ENST00000465892 A0A087WTM6 91 aa8□□□□□ -1.13
TGFBR3-204ENST00000465892 STARD9Q9P2P6 4700 aa7.98□□□□□ -1.13
TGFBR3-204ENST00000465892 DNAH2Q9P225 4427 aa7.98□□□□□ -1.13
TGFBR3-204ENST00000465892 VPS13DQ5THJ4 4388 aa7.98□□□□□ -1.13
TGFBR3-204ENST00000465892 IGLV7-43P04211 117 aa7.94□□□□□ -1.14
TGFBR3-204ENST00000465892 DNAH6Q9C0G6 4158 aa7.94□□□□□ -1.14
TGFBR3-204ENST00000465892 FLG2Q5D862 2391 aaPredicted RBP7.93□□□□□ -1.14
TGFBR3-204ENST00000465892 DYNC2H1Q8NCM8 4307 aaKnown RBP7.93□□□□□ -1.14
TGFBR3-204ENST00000465892 Q8N1X5 172 aa7.92□□□□□ -1.14
TGFBR3-204ENST00000465892 SSBP3-AS1Q7Z2R9 100 aa7.86□□□□□ -1.15
TGFBR3-204ENST00000465892 KRTAP16-1A8MUX0 517 aa7.85□□□□□ -1.15
TGFBR3-204ENST00000465892 DNAH11Q96DT5 4516 aa7.85□□□□□ -1.15
TGFBR3-204ENST00000465892 DNHD1Q96M86 4753 aa7.84□□□□□ -1.15
TGFBR3-204ENST00000465892 KRTAP13-2Q52LG2 175 aa7.84□□□□□ -1.15
TGFBR3-204ENST00000465892 NUPR2A6NF83 97 aa7.82□□□□□ -1.16
TGFBR3-204ENST00000465892 C1orf134Q5TEV5 83 aa7.8□□□□□ -1.16
TGFBR3-204ENST00000465892 CRIPTQ9P021 101 aa7.8□□□□□ -1.16
TGFBR3-204ENST00000465892 LRP1BQ9NZR2 4599 aa7.79□□□□□ -1.16
TGFBR3-204ENST00000465892 H0YAA0 97 aa7.78□□□□□ -1.16
TGFBR3-204ENST00000465892 Q6ZSA8 131 aa7.78□□□□□ -1.16
TGFBR3-204ENST00000465892 TYMSOSQ8TAI1 123 aa7.76□□□□□ -1.17
TGFBR3-204ENST00000465892 PRKDCP78527 4128 aaKnown RBP7.75□□□□□ -1.17
TGFBR3-204ENST00000465892 LINC00304Q8N9R0 145 aa7.73□□□□□ -1.17
TGFBR3-204ENST00000465892 DNAH5Q8TE73 4624 aa7.73□□□□□ -1.17
TGFBR3-204ENST00000465892 A8MUU9 505 aa7.72□□□□□ -1.17
TGFBR3-204ENST00000465892 KRTAP10-2P60368 255 aa7.71□□□□□ -1.18
TGFBR3-204ENST00000465892 LY6G6CO95867 125 aa7.7□□□□□ -1.18
TGFBR3-204ENST00000465892 KRTAP25-1Q3LHN0 102 aa7.69□□□□□ -1.18
TGFBR3-204ENST00000465892 VPS13BQ7Z7G8 4022 aa7.68□□□□□ -1.18
TGFBR3-204ENST00000465892 A0A1B0GU33 70 aa7.65□□□□□ -1.18
TGFBR3-204ENST00000465892 FAT2Q9NYQ8 4349 aa7.65□□□□□ -1.18
TGFBR3-204ENST00000465892 ROMO1P60602 79 aa7.65□□□□□ -1.19
TGFBR3-204ENST00000465892 DMBT1Q9UGM3 2413 aaPredicted RBP7.63□□□□□ -1.19
TGFBR3-204ENST00000465892 KRTAP1-4P0C5Y4 121 aa7.62□□□□□ -1.19
TGFBR3-204ENST00000465892 C9orf92A6NGG3 77 aa7.6□□□□□ -1.19
TGFBR3-204ENST00000465892 KRTAP10-1P60331 282 aa7.57□□□□□ -1.2
TGFBR3-204ENST00000465892 H1FX-AS1Q4G0G2 97 aa7.57□□□□□ -1.2
TGFBR3-204ENST00000465892 KRTAP3-1Q9BYR8 98 aa7.57□□□□□ -1.2
TGFBR3-204ENST00000465892 PKD1P98161 4303 aa7.5□□□□□ -1.21
TGFBR3-204ENST00000465892 P0C880 135 aa7.49□□□□□ -1.21
TGFBR3-204ENST00000465892 HYDINQ4G0P3 5121 aa7.49□□□□□ -1.21
TGFBR3-204ENST00000465892 COX6B2Q6YFQ2 88 aa7.47□□□□□ -1.21
TGFBR3-204ENST00000465892 K7ERS5 55 aa7.46□□□□□ -1.22
TGFBR3-204ENST00000465892 A0A0D9SG42 100 aa7.43□□□□□ -1.22
TGFBR3-204ENST00000465892 PKHD1P08F94 4074 aa7.41□□□□□ -1.22
TGFBR3-204ENST00000465892 SPINT4Q6UDR6 99 aa7.38□□□□□ -1.23
TGFBR3-204ENST00000465892 SMR3BP02814 79 aaPredicted RBP7.36□□□□□ -1.23
TGFBR3-204ENST00000465892 C10orf95Q9H7T3 257 aa7.36□□□□□ -1.23
TGFBR3-204ENST00000465892 C20orf166-AS1Q96NR2 134 aa7.34□□□□□ -1.24
TGFBR3-204ENST00000465892 FAT1Q14517 4588 aa7.33□□□□□ -1.24
TGFBR3-204ENST00000465892 TPRXLQ17RH7 258 aa7.33□□□□□ -1.24
TGFBR3-204ENST00000465892 KRTAP13-4Q3LI77 160 aa7.32□□□□□ -1.24
TGFBR3-204ENST00000465892 RPL37P61927 97 aaKnown RBP7.3□□□□□ -1.24
TGFBR3-204ENST00000465892 KRTAP10-6P60371 365 aaPredicted RBP7.25□□□□□ -1.25
TGFBR3-204ENST00000465892 SACSQ9NZJ4 4579 aa7.24□□□□□ -1.25
TGFBR3-204ENST00000465892 NDUFAF8A1L188 74 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 209.2 ms