RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 IGKV4-1P06312 121 aa9.68□□□□□ -0.86
PTPRU-206ENST00000465525 HIST1H4AP62805 103 aaKnown RBP9.67□□□□□ -0.86
PTPRU-206ENST00000465525 ATOX1O00244 68 aa9.65□□□□□ -0.86
PTPRU-206ENST00000465525 BPY2O14599 106 aa9.64□□□□□ -0.87
PTPRU-206ENST00000465525 PRR4Q16378 134 aa9.64□□□□□ -0.87
PTPRU-206ENST00000465525 FP248Q71RG6 208 aaPredicted RBP9.61□□□□□ -0.87
PTPRU-206ENST00000465525 A0A087WVE0 104 aa9.61□□□□□ -0.87
PTPRU-206ENST00000465525 DSCR10P59022 87 aa9.61□□□□□ -0.87
PTPRU-206ENST00000465525 Q8N9L7 120 aa9.6□□□□□ -0.87
PTPRU-206ENST00000465525 J3KT08 172 aa9.59□□□□□ -0.87
PTPRU-206ENST00000465525 IGLV7-46A0A075B6I9 117 aa9.58□□□□□ -0.88
PTPRU-206ENST00000465525 K7EQZ3 153 aa9.57□□□□□ -0.88
PTPRU-206ENST00000465525 IGHV6-1A0A0B4J1U7 121 aa9.56□□□□□ -0.88
PTPRU-206ENST00000465525 A8MWP4 228 aa9.56□□□□□ -0.88
PTPRU-206ENST00000465525 HMCN2Q8NDA2 5059 aa9.55□□□□□ -0.88
PTPRU-206ENST00000465525 A0A1B0GVX0 72 aa9.54□□□□□ -0.88
PTPRU-206ENST00000465525 C9orf92A6NGG3 77 aa9.54□□□□□ -0.88
PTPRU-206ENST00000465525 UQCRQO14949 82 aa9.54□□□□□ -0.88
PTPRU-206ENST00000465525 CCDC179H3BU77 68 aa9.53□□□□□ -0.88
PTPRU-206ENST00000465525 NDUFB1O75438 58 aa9.52□□□□□ -0.89
PTPRU-206ENST00000465525 COX7CP15954 63 aa9.52□□□□□ -0.89
PTPRU-206ENST00000465525 NOTCH2NLQ7Z3S9 236 aa9.52□□□□□ -0.89
PTPRU-206ENST00000465525 SERP2Q8N6R1 65 aa9.51□□□□□ -0.89
PTPRU-206ENST00000465525 PRR15Q8IV56 129 aa9.51□□□□□ -0.89
PTPRU-206ENST00000465525 SMIM20Q8N5G0 67 aa9.5□□□□□ -0.89
PTPRU-206ENST00000465525 TPRXLQ17RH7 258 aa9.48□□□□□ -0.89
PTPRU-206ENST00000465525 KRTAP13-3Q3SY46 172 aa9.47□□□□□ -0.89
PTPRU-206ENST00000465525 LINC00313P59037 77 aa9.45□□□□□ -0.9
PTPRU-206ENST00000465525 C8orf17Q9NRJ1 99 aa9.45□□□□□ -0.9
PTPRU-206ENST00000465525 MMP24-AS1A0A0U1RRL7 71 aa9.43□□□□□ -0.9
PTPRU-206ENST00000465525 TRAV7A0A075B6U4 112 aa9.42□□□□□ -0.9
PTPRU-206ENST00000465525 C8orf87E5RJ46 101 aa9.42□□□□□ -0.9
PTPRU-206ENST00000465525 WFDC13Q8IUB5 93 aa9.42□□□□□ -0.9
PTPRU-206ENST00000465525 LPAP08519 4548 aa9.4□□□□□ -0.91
PTPRU-206ENST00000465525 KRTAP16-1A8MUX0 517 aa9.39□□□□□ -0.91
PTPRU-206ENST00000465525 HCG22E2RYF7 251 aa9.38□□□□□ -0.91
PTPRU-206ENST00000465525 CASC2Q6XLA1 102 aa9.37□□□□□ -0.91
PTPRU-206ENST00000465525 hDV103S1A0JD37 113 aa9.36□□□□□ -0.91
PTPRU-206ENST00000465525 LRP2P98164 4655 aa9.36□□□□□ -0.91
PTPRU-206ENST00000465525 XP32Q5T750 250 aa9.36□□□□□ -0.91
PTPRU-206ENST00000465525 TMEM254Q8TBM7 123 aa9.32□□□□□ -0.92
PTPRU-206ENST00000465525 MRPL34Q9BQ48 92 aaKnown RBP9.32□□□□□ -0.92
PTPRU-206ENST00000465525 NDUFS5O43920 106 aa9.28□□□□□ -0.92
PTPRU-206ENST00000465525 C20orf197Q8N268 126 aa9.28□□□□□ -0.92
PTPRU-206ENST00000465525 OCR1Q9BZK8 76 aa9.27□□□□□ -0.93
PTPRU-206ENST00000465525 C20orf166-AS1Q96NR2 134 aa9.26□□□□□ -0.93
PTPRU-206ENST00000465525 A8MUU9 505 aa9.26□□□□□ -0.93
PTPRU-206ENST00000465525 Q8N9P0 234 aaPredicted RBP9.25□□□□□ -0.93
PTPRU-206ENST00000465525 KLKP1Q107X0 134 aa9.24□□□□□ -0.93
PTPRU-206ENST00000465525 RPL37P61927 97 aaKnown RBP9.23□□□□□ -0.93
PTPRU-206ENST00000465525 Q75L30 129 aa9.23□□□□□ -0.93
PTPRU-206ENST00000465525 TMEM258P61165 79 aa9.23□□□□□ -0.93
PTPRU-206ENST00000465525 NDUFC1O43677 76 aa9.2□□□□□ -0.94
PTPRU-206ENST00000465525 CYSTM1Q9H1C7 97 aa9.2□□□□□ -0.94
PTPRU-206ENST00000465525 SEC61BP60468 96 aaKnown RBP9.17□□□□□ -0.94
PTPRU-206ENST00000465525 UBR4Q5T4S7 5183 aa9.17□□□□□ -0.94
PTPRU-206ENST00000465525 PCOTHQ58A44 107 aa9.16□□□□□ -0.94
PTPRU-206ENST00000465525 C5orf47Q569G3 176 aa9.15□□□□□ -0.94
PTPRU-206ENST00000465525 ATP11AUNQ6ZP68 121 aa9.15□□□□□ -0.94
PTPRU-206ENST00000465525 SNURFQ9Y675 71 aa9.15□□□□□ -0.94
PTPRU-206ENST00000465525 A0A0U1RQV1 116 aa9.13□□□□□ -0.95
PTPRU-206ENST00000465525 Q5W150 140 aa9.13□□□□□ -0.95
PTPRU-206ENST00000465525 ZCCHC13Q8WW36 166 aaKnown RBP9.13□□□□□ -0.95
PTPRU-206ENST00000465525 H7BZZ5 65 aa9.13□□□□□ -0.95
PTPRU-206ENST00000465525 TP53AIP1Q9HCN2 124 aa9.1□□□□□ -0.95
PTPRU-206ENST00000465525 MUC17Q685J3 4493 aa9.09□□□□□ -0.95
PTPRU-206ENST00000465525 MP68P56378 58 aa9.07□□□□□ -0.96
PTPRU-206ENST00000465525 FAM236DA0A1B0GTK5 79 aa9.07□□□□□ -0.96
PTPRU-206ENST00000465525 FAM236CP0DP71 79 aa9.07□□□□□ -0.96
PTPRU-206ENST00000465525 RPS28P62857 69 aaKnown RBP9.06□□□□□ -0.96
PTPRU-206ENST00000465525 ATP5EP56381 51 aaPredicted RBP9.05□□□□□ -0.96
PTPRU-206ENST00000465525 H3BPC8 53 aa9.04□□□□□ -0.96
PTPRU-206ENST00000465525 TRAV22A0A0B4J277 110 aa9.02□□□□□ -0.97
PTPRU-206ENST00000465525 KRTAP4-1Q9BYQ7 146 aa9.02□□□□□ -0.97
PTPRU-206ENST00000465525 RNF213Q63HN8 5207 aa9.01□□□□□ -0.97
PTPRU-206ENST00000465525 H0Y9P7 68 aa9.01□□□□□ -0.97
PTPRU-206ENST00000465525 IGKV2D-30A0A075B6S6 120 aa8.98□□□□□ -0.97
PTPRU-206ENST00000465525 IGKV2-30P06310 120 aa8.98□□□□□ -0.97
PTPRU-206ENST00000465525 SPINK7P58062 85 aa8.95□□□□□ -0.98
PTPRU-206ENST00000465525 LINC00208Q96KT6 92 aa8.95□□□□□ -0.98
PTPRU-206ENST00000465525 MUC2Q02817 5179 aa8.95□□□□□ -0.98
PTPRU-206ENST00000465525 SERP1Q9Y6X1 66 aa8.94□□□□□ -0.98
PTPRU-206ENST00000465525 C1orf64Q8NEQ6 169 aa8.91□□□□□ -0.98
PTPRU-206ENST00000465525 C7orf65Q6ZTY9 151 aa8.9□□□□□ -0.98
PTPRU-206ENST00000465525 LOC101927531A0A1B0GV80 90 aa8.87□□□□□ -0.99
PTPRU-206ENST00000465525 CYP4F30PQ9H0H9 118 aa8.86□□□□□ -0.99
PTPRU-206ENST00000465525 SPANXA2-OT1Q8N9U9 137 aa8.84□□□□□ -0.99
PTPRU-206ENST00000465525 HRES1P13985 223 aa8.83□□□□□ -1
PTPRU-206ENST00000465525 C4orf26Q17RF5 130 aa8.77□□□□□ -1.01
PTPRU-206ENST00000465525 SMIM26A0A096LP01 95 aa8.75□□□□□ -1.01
PTPRU-206ENST00000465525 MPLKIPQ8TAP9 179 aa8.72□□□□□ -1.01
PTPRU-206ENST00000465525 RBM12B-AS1Q9P1G2 102 aa8.7□□□□□ -1.02
PTPRU-206ENST00000465525 KRTAP19-2Q3LHN2 52 aa8.68□□□□□ -1.02
PTPRU-206ENST00000465525 FAT4Q6V0I7 4981 aa8.67□□□□□ -1.02
PTPRU-206ENST00000465525 COX6B2Q6YFQ2 88 aa8.65□□□□□ -1.02
PTPRU-206ENST00000465525 KRTAP3-1Q9BYR8 98 aa8.63□□□□□ -1.03
PTPRU-206ENST00000465525 LCE2CQ5TA81 110 aa8.62□□□□□ -1.03
PTPRU-206ENST00000465525 COA5Q86WW8 74 aa8.55□□□□□ -1.04
PTPRU-206ENST00000465525 H1FX-AS1Q4G0G2 97 aa8.53□□□□□ -1.04
PTPRU-206ENST00000465525 Q1T7F1 81 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms