RNA–Protein interactions for RNA: ENST00000464525.5

POLR2J3-203, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,456 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-203ENST00000464525 NDUFC1O43677 76 aa11.63□□□□□ -0.55
POLR2J3-203ENST00000464525 MMP24-AS1A0A0U1RRL7 71 aa11.61□□□□□ -0.55
POLR2J3-203ENST00000464525 NDUFB1O75438 58 aa11.6□□□□□ -0.55
POLR2J3-203ENST00000464525 A0A087X002 238 aa11.58□□□□□ -0.56
POLR2J3-203ENST00000464525 PRR26Q8N8Z3 221 aa11.58□□□□□ -0.56
POLR2J3-203ENST00000464525 IGHV6-1A0A0B4J1U7 121 aa11.56□□□□□ -0.56
POLR2J3-203ENST00000464525 ZCCHC13Q8WW36 166 aaKnown RBP11.56□□□□□ -0.56
POLR2J3-203ENST00000464525 SMR3BP02814 79 aaPredicted RBP11.55□□□□□ -0.56
POLR2J3-203ENST00000464525 hDV103S1A0JD37 113 aa11.54□□□□□ -0.56
POLR2J3-203ENST00000464525 SPINK6Q6UWN8 80 aa11.54□□□□□ -0.56
POLR2J3-203ENST00000464525 APOBP04114 4563 aaKnown RBP11.53□□□□□ -0.56
POLR2J3-203ENST00000464525 KRTAP13-2Q52LG2 175 aa11.52□□□□□ -0.56
POLR2J3-203ENST00000464525 NOTCH2NLQ7Z3S9 236 aa11.52□□□□□ -0.56
POLR2J3-203ENST00000464525 C8orf17Q9NRJ1 99 aa11.51□□□□□ -0.57
POLR2J3-203ENST00000464525 A0A1B0GVX0 72 aa11.5□□□□□ -0.57
POLR2J3-203ENST00000464525 LINC00208Q96KT6 92 aa11.5□□□□□ -0.57
POLR2J3-203ENST00000464525 SSBP3-AS1Q7Z2R9 100 aa11.49□□□□□ -0.57
POLR2J3-203ENST00000464525 CDK2AP2O75956 126 aa11.48□□□□□ -0.57
POLR2J3-203ENST00000464525 H0Y9P7 68 aa11.48□□□□□ -0.57
POLR2J3-203ENST00000464525 MP68P56378 58 aa11.48□□□□□ -0.57
POLR2J3-203ENST00000464525 C8orf87E5RJ46 101 aa11.46□□□□□ -0.57
POLR2J3-203ENST00000464525 ASB16-AS1Q495Z4 193 aa11.46□□□□□ -0.57
POLR2J3-203ENST00000464525 KRTAP1-4P0C5Y4 121 aa11.45□□□□□ -0.58
POLR2J3-203ENST00000464525 FAT1Q14517 4588 aa11.44□□□□□ -0.58
POLR2J3-203ENST00000464525 ATP5EP56381 51 aaPredicted RBP11.43□□□□□ -0.58
POLR2J3-203ENST00000464525 PRR4Q16378 134 aa11.43□□□□□ -0.58
POLR2J3-203ENST00000464525 KTN1-AS1Q86SY8 53 aa11.42□□□□□ -0.58
POLR2J3-203ENST00000464525 NDUFS5O43920 106 aa11.41□□□□□ -0.58
POLR2J3-203ENST00000464525 TRAV22A0A0B4J277 110 aa11.4□□□□□ -0.58
POLR2J3-203ENST00000464525 C1orf64Q8NEQ6 169 aa11.38□□□□□ -0.59
POLR2J3-203ENST00000464525 FAM229BQ4G0N7 80 aa11.38□□□□□ -0.59
POLR2J3-203ENST00000464525 PLA2G1BP04054 148 aaKnown RBP11.37□□□□□ -0.59
POLR2J3-203ENST00000464525 MPLKIPQ8TAP9 179 aa11.36□□□□□ -0.59
POLR2J3-203ENST00000464525 MRPL34Q9BQ48 92 aaKnown RBP11.36□□□□□ -0.59
POLR2J3-203ENST00000464525 TP53AIP1Q9HCN2 124 aa11.31□□□□□ -0.6
POLR2J3-203ENST00000464525 H3BPC8 53 aa11.3□□□□□ -0.6
POLR2J3-203ENST00000464525 KRTAP10-4P60372 401 aaPredicted RBP11.3□□□□□ -0.6
POLR2J3-203ENST00000464525 EPPK1P58107 5090 aaKnown RBP11.29□□□□□ -0.6
POLR2J3-203ENST00000464525 TYMSOSQ8TAI1 123 aa11.27□□□□□ -0.61
POLR2J3-203ENST00000464525 HSPG2P98160 4391 aa11.26□□□□□ -0.61
POLR2J3-203ENST00000464525 PCOTHQ58A44 107 aa11.26□□□□□ -0.61
POLR2J3-203ENST00000464525 Q5W150 140 aa11.24□□□□□ -0.61
POLR2J3-203ENST00000464525 RYR1P21817 5038 aa11.23□□□□□ -0.61
POLR2J3-203ENST00000464525 CYP4F30PQ9H0H9 118 aa11.23□□□□□ -0.61
POLR2J3-203ENST00000464525 LINC00313P59037 77 aa11.21□□□□□ -0.61
POLR2J3-203ENST00000464525 KIAA1109Q2LD37 5005 aa11.2□□□□□ -0.62
POLR2J3-203ENST00000464525 FAM229AH3BQW9 127 aa11.18□□□□□ -0.62
POLR2J3-203ENST00000464525 LIMD2Q9BT23 127 aa11.17□□□□□ -0.62
POLR2J3-203ENST00000464525 SPANXA2-OT1Q8N9U9 137 aa11.17□□□□□ -0.62
POLR2J3-203ENST00000464525 KRTAP17-1Q9BYP8 105 aa11.16□□□□□ -0.62
POLR2J3-203ENST00000464525 Q5VSD8 79 aa11.15□□□□□ -0.62
POLR2J3-203ENST00000464525 RETNLBQ9BQ08 111 aa11.15□□□□□ -0.62
POLR2J3-203ENST00000464525 KRTAP13-3Q3SY46 172 aa11.14□□□□□ -0.63
POLR2J3-203ENST00000464525 A8MUN3 132 aa11.13□□□□□ -0.63
POLR2J3-203ENST00000464525 SPINK1P00995 79 aa11.13□□□□□ -0.63
POLR2J3-203ENST00000464525 LINC00304Q8N9R0 145 aa11.11□□□□□ -0.63
POLR2J3-203ENST00000464525 IGLV7-46A0A075B6I9 117 aa11.1□□□□□ -0.63
POLR2J3-203ENST00000464525 KRTAP16-1A8MUX0 517 aa11.1□□□□□ -0.63
POLR2J3-203ENST00000464525 Q8N9P0 234 aaPredicted RBP11.08□□□□□ -0.64
POLR2J3-203ENST00000464525 Q1T7F1 81 aa11.06□□□□□ -0.64
POLR2J3-203ENST00000464525 LCA10Q71F78 164 aa11.06□□□□□ -0.64
POLR2J3-203ENST00000464525 PKHD1L1Q86WI1 4243 aa11.05□□□□□ -0.64
POLR2J3-203ENST00000464525 LOC101927531A0A1B0GV80 90 aa11.03□□□□□ -0.64
POLR2J3-203ENST00000464525 LRP1Q07954 4544 aaKnown RBP11.02□□□□□ -0.65
POLR2J3-203ENST00000464525 COA5Q86WW8 74 aa10.99□□□□□ -0.65
POLR2J3-203ENST00000464525 FLG2Q5D862 2391 aaPredicted RBP10.98□□□□□ -0.65
POLR2J3-203ENST00000464525 A0A0A0MQY5 61 aa10.97□□□□□ -0.65
POLR2J3-203ENST00000464525 SPAG11AQ6PDA7 123 aa10.97□□□□□ -0.65
POLR2J3-203ENST00000464525 C7orf65Q6ZTY9 151 aa10.96□□□□□ -0.65
POLR2J3-203ENST00000464525 Q8N1X5 172 aa10.96□□□□□ -0.65
POLR2J3-203ENST00000464525 A8MU10 97 aa10.96□□□□□ -0.66
POLR2J3-203ENST00000464525 A6NN06 94 aa10.94□□□□□ -0.66
POLR2J3-203ENST00000464525 RPS29P62273 56 aaKnown RBP10.94□□□□□ -0.66
POLR2J3-203ENST00000464525 PSPHP1O15172 72 aa10.92□□□□□ -0.66
POLR2J3-203ENST00000464525 HRES1P13985 223 aa10.91□□□□□ -0.66
POLR2J3-203ENST00000464525 IGKV2-30P06310 120 aa10.89□□□□□ -0.67
POLR2J3-203ENST00000464525 TNXBP22105 4242 aa10.89□□□□□ -0.67
POLR2J3-203ENST00000464525 ATP11AUNQ6ZP68 121 aa10.89□□□□□ -0.67
POLR2J3-203ENST00000464525 MYCBP2O75592 4640 aa10.88□□□□□ -0.67
POLR2J3-203ENST00000464525 C9orf92A6NGG3 77 aa10.87□□□□□ -0.67
POLR2J3-203ENST00000464525 IGKV2D-30A0A075B6S6 120 aa10.87□□□□□ -0.67
POLR2J3-203ENST00000464525 FAT3Q8TDW7 4589 aa10.86□□□□□ -0.67
POLR2J3-203ENST00000464525 SPTSSBQ8NFR3 76 aa10.84□□□□□ -0.67
POLR2J3-203ENST00000464525 KRTAP4-5Q9BYR2 181 aa10.84□□□□□ -0.67
POLR2J3-203ENST00000464525 KRTAP10-8P60410 259 aa10.83□□□□□ -0.68
POLR2J3-203ENST00000464525 LINC01554Q52M75 96 aa10.81□□□□□ -0.68
POLR2J3-203ENST00000464525 DMBT1Q9UGM3 2413 aaPredicted RBP10.77□□□□□ -0.69
POLR2J3-203ENST00000464525 Q5VV11 94 aa10.75□□□□□ -0.69
POLR2J3-203ENST00000464525 DMAC1Q96GE9 116 aa10.74□□□□□ -0.69
POLR2J3-203ENST00000464525 BIRC6Q9NR09 4857 aa10.74□□□□□ -0.69
POLR2J3-203ENST00000464525 ACYP2P14621 99 aa10.73□□□□□ -0.69
POLR2J3-203ENST00000464525 PRR15LQ9BU68 103 aa10.73□□□□□ -0.69
POLR2J3-203ENST00000464525 MT1HL1P0DM35 61 aa10.72□□□□□ -0.69
POLR2J3-203ENST00000464525 ABCA13Q86UQ4 5058 aa10.68□□□□□ -0.7
POLR2J3-203ENST00000464525 A8MUU9 505 aa10.67□□□□□ -0.7
POLR2J3-203ENST00000464525 C20orf166-AS1Q96NR2 134 aa10.67□□□□□ -0.7
POLR2J3-203ENST00000464525 CHKB-CPT1BH3BT56 60 aa10.66□□□□□ -0.7
POLR2J3-203ENST00000464525 LINC01558Q9Y6Z2 57 aa10.62□□□□□ -0.71
POLR2J3-203ENST00000464525 HERC2O95714 4834 aa10.61□□□□□ -0.71
POLR2J3-203ENST00000464525 Q75L30 129 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms