RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 CEND1Q8N111 149 aa9.87□□□□□ -0.83
CPSF7-209ENST00000463244 TMEM256-PLSCR3K7ERE1 68 aa9.85□□□□□ -0.83
CPSF7-209ENST00000463244 TMEM238LA0A1B0GVL6 79 aa9.84□□□□□ -0.83
CPSF7-209ENST00000463244 A6NJY4 79 aa9.84□□□□□ -0.83
CPSF7-209ENST00000463244 S100A6P06703 90 aa9.84□□□□□ -0.83
CPSF7-209ENST00000463244 WFDC13Q8IUB5 93 aa9.84□□□□□ -0.83
CPSF7-209ENST00000463244 FXYD2P54710 66 aa9.81□□□□□ -0.84
CPSF7-209ENST00000463244 PAM16Q9Y3D7 125 aa9.81□□□□□ -0.84
CPSF7-209ENST00000463244 SPATA45Q537H7 98 aa9.8□□□□□ -0.84
CPSF7-209ENST00000463244 VPS25Q9BRG1 176 aa9.79□□□□□ -0.84
CPSF7-209ENST00000463244 UBE2V1Q13404 147 aa9.78□□□□□ -0.84
CPSF7-209ENST00000463244 J3KT08 172 aa9.76□□□□□ -0.85
CPSF7-209ENST00000463244 PSMB2P49721 201 aa9.73□□□□□ -0.85
CPSF7-209ENST00000463244 VAMP8Q9BV40 100 aa9.72□□□□□ -0.85
CPSF7-209ENST00000463244 COX6CP09669 75 aa9.71□□□□□ -0.86
CPSF7-209ENST00000463244 RBM3P98179 157 aaKnown RBP9.71□□□□□ -0.86
CPSF7-209ENST00000463244 NEBP20929 6669 aa9.71□□□□□ -0.86
CPSF7-209ENST00000463244 NDUFB1O75438 58 aa9.7□□□□□ -0.86
CPSF7-209ENST00000463244 LYRM7Q5U5X0 104 aa9.7□□□□□ -0.86
CPSF7-209ENST00000463244 DSCR8Q96T75 97 aa9.7□□□□□ -0.86
CPSF7-209ENST00000463244 MUC12Q9UKN1 5478 aa9.69□□□□□ -0.86
CPSF7-209ENST00000463244 K7ERJ3 54 aa9.68□□□□□ -0.86
CPSF7-209ENST00000463244 C21orf62-AS1Q17RA5 79 aa9.67□□□□□ -0.86
CPSF7-209ENST00000463244 Q6ZQT0 140 aa9.67□□□□□ -0.86
CPSF7-209ENST00000463244 C8orf17Q9NRJ1 99 aa9.67□□□□□ -0.86
CPSF7-209ENST00000463244 H1FX-AS1Q4G0G2 97 aa9.66□□□□□ -0.86
CPSF7-209ENST00000463244 S100A1P23297 94 aa9.65□□□□□ -0.86
CPSF7-209ENST00000463244 IGKV3D-7A0A0C4DH55 119 aa9.62□□□□□ -0.87
CPSF7-209ENST00000463244 C9JAW5 83 aa9.62□□□□□ -0.87
CPSF7-209ENST00000463244 HSD52Q0P140 79 aa9.6□□□□□ -0.87
CPSF7-209ENST00000463244 Q6ZVQ6 151 aa9.6□□□□□ -0.87
CPSF7-209ENST00000463244 BAALC-AS2P0C853 105 aa9.53□□□□□ -0.88
CPSF7-209ENST00000463244 SCGB1C2P0DMR2 95 aa9.52□□□□□ -0.89
CPSF7-209ENST00000463244 A0A1B0GW54 56 aa9.5□□□□□ -0.89
CPSF7-209ENST00000463244 A6NN06 94 aa9.5□□□□□ -0.89
CPSF7-209ENST00000463244 PRR15Q8IV56 129 aa9.5□□□□□ -0.89
CPSF7-209ENST00000463244 TMEM254Q8TBM7 123 aa9.48□□□□□ -0.89
CPSF7-209ENST00000463244 MRPL34Q9BQ48 92 aaKnown RBP9.48□□□□□ -0.89
CPSF7-209ENST00000463244 KRTAP20-1Q3LI63 56 aa9.47□□□□□ -0.89
CPSF7-209ENST00000463244 MMP24-AS1A0A0U1RRL7 71 aa9.46□□□□□ -0.9
CPSF7-209ENST00000463244 LOC110117498A0A087WWA1 95 aa9.44□□□□□ -0.9
CPSF7-209ENST00000463244 MT1BP07438 61 aa9.43□□□□□ -0.9
CPSF7-209ENST00000463244 JMJD7-PLA2G4BH0Y9G9 81 aa9.42□□□□□ -0.9
CPSF7-209ENST00000463244 IGKV2D-30A0A075B6S6 120 aa9.41□□□□□ -0.9
CPSF7-209ENST00000463244 IGKV2-30P06310 120 aa9.41□□□□□ -0.9
CPSF7-209ENST00000463244 hDV103S1A0JD37 113 aa9.39□□□□□ -0.91
CPSF7-209ENST00000463244 NDUFS5O43920 106 aa9.39□□□□□ -0.91
CPSF7-209ENST00000463244 PDE6GP18545 87 aa9.39□□□□□ -0.91
CPSF7-209ENST00000463244 C7orf65Q6ZTY9 151 aa9.38□□□□□ -0.91
CPSF7-209ENST00000463244 PYY3Q5JQD4 70 aa9.37□□□□□ -0.91
CPSF7-209ENST00000463244 Q5VV11 94 aa9.37□□□□□ -0.91
CPSF7-209ENST00000463244 NREPQ16612 68 aa9.36□□□□□ -0.91
CPSF7-209ENST00000463244 FAM236AA0A1B0GUQ0 79 aa9.35□□□□□ -0.91
CPSF7-209ENST00000463244 FAM236BA0A1B0GV22 79 aa9.35□□□□□ -0.91
CPSF7-209ENST00000463244 Q5W150 140 aa9.35□□□□□ -0.91
CPSF7-209ENST00000463244 KMT2DO14686 5537 aa9.35□□□□□ -0.91
CPSF7-209ENST00000463244 KRTAP5-9P26371 169 aa9.34□□□□□ -0.91
CPSF7-209ENST00000463244 KRTAP19-8Q3LI54 63 aa9.34□□□□□ -0.91
CPSF7-209ENST00000463244 C14orf132Q9NPU4 83 aa9.34□□□□□ -0.91
CPSF7-209ENST00000463244 UQCR10Q9UDW1 63 aa9.34□□□□□ -0.91
CPSF7-209ENST00000463244 MDN1Q9NU22 5596 aa9.33□□□□□ -0.92
CPSF7-209ENST00000463244 K7EQZ3 153 aa9.32□□□□□ -0.92
CPSF7-209ENST00000463244 KRTAP10-5P60370 271 aa9.32□□□□□ -0.92
CPSF7-209ENST00000463244 ATXN8Q156A1 80 aa9.32□□□□□ -0.92
CPSF7-209ENST00000463244 SPRR2GQ9BYE4 73 aa9.32□□□□□ -0.92
CPSF7-209ENST00000463244 C5orf47Q569G3 176 aa9.31□□□□□ -0.92
CPSF7-209ENST00000463244 C4orf26Q17RF5 130 aa9.3□□□□□ -0.92
CPSF7-209ENST00000463244 NAA38Q9BRA0 125 aaKnown RBP9.21□□□□□ -0.94
CPSF7-209ENST00000463244 CSAG1Q6PB30 78 aa9.18□□□□□ -0.94
CPSF7-209ENST00000463244 KRTAP3-1Q9BYR8 98 aa9.18□□□□□ -0.94
CPSF7-209ENST00000463244 S4R3F8 94 aa9.18□□□□□ -0.94
CPSF7-209ENST00000463244 HCG22E2RYF7 251 aa9.16□□□□□ -0.94
CPSF7-209ENST00000463244 BPY2O14599 106 aa9.15□□□□□ -0.94
CPSF7-209ENST00000463244 CASC2Q6XLA1 102 aa9.13□□□□□ -0.95
CPSF7-209ENST00000463244 LCA10Q71F78 164 aa9.13□□□□□ -0.95
CPSF7-209ENST00000463244 CXCL6P80162 114 aa9.11□□□□□ -0.95
CPSF7-209ENST00000463244 KLKP1Q107X0 134 aa9.11□□□□□ -0.95
CPSF7-209ENST00000463244 KRTAP2-3P0C7H8 128 aa9.09□□□□□ -0.95
CPSF7-209ENST00000463244 Q8N9L7 120 aa9.09□□□□□ -0.95
CPSF7-209ENST00000463244 KRTAP2-4Q9BYR9 128 aa9.09□□□□□ -0.95
CPSF7-209ENST00000463244 M0R143 59 aa9.07□□□□□ -0.96
CPSF7-209ENST00000463244 C1orf64Q8NEQ6 169 aa9.06□□□□□ -0.96
CPSF7-209ENST00000463244 IMUPQ9GZP8 106 aa9.04□□□□□ -0.96
CPSF7-209ENST00000463244 SMCPP49901 116 aaPredicted RBP9□□□□□ -0.97
CPSF7-209ENST00000463244 H3BT86 120 aa8.97□□□□□ -0.97
CPSF7-209ENST00000463244 KRTAP3-3Q9BYR6 98 aa8.96□□□□□ -0.98
CPSF7-209ENST00000463244 CRIPTQ9P021 101 aa8.95□□□□□ -0.98
CPSF7-209ENST00000463244 SPRR2FQ96RM1 72 aa8.93□□□□□ -0.98
CPSF7-209ENST00000463244 SPRR2EP22531 72 aa8.9□□□□□ -0.98
CPSF7-209ENST00000463244 SPRR2BP35325 72 aa8.9□□□□□ -0.98
CPSF7-209ENST00000463244 SPRR2AP35326 72 aa8.9□□□□□ -0.98
CPSF7-209ENST00000463244 TSTD3H0UI37 97 aa8.88□□□□□ -0.99
CPSF7-209ENST00000463244 TMA7Q9Y2S6 64 aaKnown RBP8.85□□□□□ -0.99
CPSF7-209ENST00000463244 A0A087WVE0 104 aa8.79□□□□□ -1
CPSF7-209ENST00000463244 BATFQ16520 125 aa8.78□□□□□ -1
CPSF7-209ENST00000463244 TP53AIP1Q9HCN2 124 aa8.78□□□□□ -1
CPSF7-209ENST00000463244 C9orf118A6NHY6 69 aa8.77□□□□□ -1.01
CPSF7-209ENST00000463244 KRTAP2-2Q9BYT5 123 aa8.77□□□□□ -1.01
CPSF7-209ENST00000463244 KRTAP2-1Q9BYU5 128 aa8.77□□□□□ -1.01
CPSF7-209ENST00000463244 A0A1W2PPM0 123 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms