RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 NOTCH2NLQ7Z3S9 236 aa8.34□□□□□ -1.07
ERCC3-206ENST00000462306 MTURNQ8N3F0 131 aa8.34□□□□□ -1.07
ERCC3-206ENST00000462306 KRTAP16-1A8MUX0 517 aa8.33□□□□□ -1.08
ERCC3-206ENST00000462306 COL5A1-AS1Q5SY13 56 aa8.33□□□□□ -1.08
ERCC3-206ENST00000462306 SPCS1Q9Y6A9 102 aa8.31□□□□□ -1.08
ERCC3-206ENST00000462306 IGHV6-1A0A0B4J1U7 121 aa8.3□□□□□ -1.08
ERCC3-206ENST00000462306 A0A1B0GVX0 72 aa8.29□□□□□ -1.08
ERCC3-206ENST00000462306 J3KT08 172 aa8.29□□□□□ -1.08
ERCC3-206ENST00000462306 C8orf87E5RJ46 101 aa8.25□□□□□ -1.09
ERCC3-206ENST00000462306 SMCPP49901 116 aaPredicted RBP8.25□□□□□ -1.09
ERCC3-206ENST00000462306 PCP4L1A6NKN8 68 aa8.24□□□□□ -1.09
ERCC3-206ENST00000462306 K7EP34 96 aa8.22□□□□□ -1.09
ERCC3-206ENST00000462306 PRO0461Q9UI25 63 aa8.22□□□□□ -1.09
ERCC3-206ENST00000462306 A8MWP4 228 aa8.21□□□□□ -1.1
ERCC3-206ENST00000462306 NDUFB1O75438 58 aa8.21□□□□□ -1.1
ERCC3-206ENST00000462306 MT1HP80294 61 aa8.21□□□□□ -1.1
ERCC3-206ENST00000462306 NREPQ16612 68 aa8.21□□□□□ -1.1
ERCC3-206ENST00000462306 IGKV3D-7A0A0C4DH55 119 aa8.19□□□□□ -1.1
ERCC3-206ENST00000462306 C8orf17Q9NRJ1 99 aa8.17□□□□□ -1.1
ERCC3-206ENST00000462306 COX6B2Q6YFQ2 88 aa8.15□□□□□ -1.1
ERCC3-206ENST00000462306 PRR15Q8IV56 129 aa8.15□□□□□ -1.1
ERCC3-206ENST00000462306 Q8N9P0 234 aaPredicted RBP8.13□□□□□ -1.11
ERCC3-206ENST00000462306 GTF2H5Q6ZYL4 71 aa8.12□□□□□ -1.11
ERCC3-206ENST00000462306 Q6ZVQ6 151 aa8.1□□□□□ -1.11
ERCC3-206ENST00000462306 K7EQZ3 153 aa8.09□□□□□ -1.11
ERCC3-206ENST00000462306 ZCCHC13Q8WW36 166 aaKnown RBP8.09□□□□□ -1.11
ERCC3-206ENST00000462306 FLGP20930 4061 aaPredicted RBP8.09□□□□□ -1.11
ERCC3-206ENST00000462306 MMP24-AS1A0A0U1RRL7 71 aa8.08□□□□□ -1.12
ERCC3-206ENST00000462306 BPY2O14599 106 aa8.08□□□□□ -1.12
ERCC3-206ENST00000462306 F8W1H4 67 aa8.06□□□□□ -1.12
ERCC3-206ENST00000462306 KRTAP9-2Q9BYQ4 174 aa8.06□□□□□ -1.12
ERCC3-206ENST00000462306 LINC00846Q9NV44 126 aa8.05□□□□□ -1.12
ERCC3-206ENST00000462306 HRES1P13985 223 aa8.04□□□□□ -1.12
ERCC3-206ENST00000462306 MPLKIPQ8TAP9 179 aa8.04□□□□□ -1.12
ERCC3-206ENST00000462306 TMEM254Q8TBM7 123 aa8.04□□□□□ -1.12
ERCC3-206ENST00000462306 M0R2T5 61 aa8.03□□□□□ -1.12
ERCC3-206ENST00000462306 MRPL34Q9BQ48 92 aaKnown RBP8.03□□□□□ -1.12
ERCC3-206ENST00000462306 LORP23490 312 aaPredicted RBP8.02□□□□□ -1.13
ERCC3-206ENST00000462306 KRTAP10-6P60371 365 aaPredicted RBP8.02□□□□□ -1.13
ERCC3-206ENST00000462306 ETDBQ3ZM63 59 aa8.02□□□□□ -1.13
ERCC3-206ENST00000462306 hDV103S1A0JD37 113 aa8.01□□□□□ -1.13
ERCC3-206ENST00000462306 Q8N9L7 120 aa8.01□□□□□ -1.13
ERCC3-206ENST00000462306 UBL5Q9BZL1 73 aa8□□□□□ -1.13
ERCC3-206ENST00000462306 SPINK7P58062 85 aa7.99□□□□□ -1.13
ERCC3-206ENST00000462306 RBM12B-AS1Q9P1G2 102 aa7.96□□□□□ -1.14
ERCC3-206ENST00000462306 LCE2DQ5TA82 110 aaPredicted RBP7.94□□□□□ -1.14
ERCC3-206ENST00000462306 WFDC13Q8IUB5 93 aa7.94□□□□□ -1.14
ERCC3-206ENST00000462306 FAM236DA0A1B0GTK5 79 aa7.93□□□□□ -1.14
ERCC3-206ENST00000462306 NDUFS5O43920 106 aa7.93□□□□□ -1.14
ERCC3-206ENST00000462306 FAM236CP0DP71 79 aa7.93□□□□□ -1.14
ERCC3-206ENST00000462306 CASC2Q6XLA1 102 aa7.93□□□□□ -1.14
ERCC3-206ENST00000462306 Q5W150 140 aa7.88□□□□□ -1.15
ERCC3-206ENST00000462306 HCG22E2RYF7 251 aa7.87□□□□□ -1.15
ERCC3-206ENST00000462306 CXCL6P80162 114 aa7.86□□□□□ -1.15
ERCC3-206ENST00000462306 A0A1B0GV90 55 aa7.81□□□□□ -1.16
ERCC3-206ENST00000462306 ACYP1P07311 99 aa7.81□□□□□ -1.16
ERCC3-206ENST00000462306 KRTAP9-8Q9BYQ0 159 aa7.81□□□□□ -1.16
ERCC3-206ENST00000462306 FAM240AA0A1B0GVK7 77 aa7.8□□□□□ -1.16
ERCC3-206ENST00000462306 IGKV2D-30A0A075B6S6 120 aa7.79□□□□□ -1.16
ERCC3-206ENST00000462306 IGKV2-30P06310 120 aa7.79□□□□□ -1.16
ERCC3-206ENST00000462306 C7orf65Q6ZTY9 151 aa7.77□□□□□ -1.17
ERCC3-206ENST00000462306 KRTAP9-6A0A140TA67 174 aa7.73□□□□□ -1.17
ERCC3-206ENST00000462306 MT2AP02795 61 aa7.71□□□□□ -1.18
ERCC3-206ENST00000462306 ATP5EP2Q5VTU8 51 aa7.71□□□□□ -1.18
ERCC3-206ENST00000462306 TP53AIP1Q9HCN2 124 aa7.71□□□□□ -1.18
ERCC3-206ENST00000462306 H1FX-AS1Q4G0G2 97 aa7.68□□□□□ -1.18
ERCC3-206ENST00000462306 FSIP2Q5CZC0 6907 aa7.67□□□□□ -1.18
ERCC3-206ENST00000462306 MT1FP04733 61 aa7.65□□□□□ -1.18
ERCC3-206ENST00000462306 C4orf26Q17RF5 130 aa7.65□□□□□ -1.18
ERCC3-206ENST00000462306 CRCT1Q9UGL9 99 aa7.65□□□□□ -1.18
ERCC3-206ENST00000462306 LINC00643Q86TS7 51 aa7.64□□□□□ -1.19
ERCC3-206ENST00000462306 HIST1H4AP62805 103 aaKnown RBP7.63□□□□□ -1.19
ERCC3-206ENST00000462306 KRTAP10-10P60014 251 aa7.59□□□□□ -1.19
ERCC3-206ENST00000462306 KRTAP3-1Q9BYR8 98 aa7.58□□□□□ -1.2
ERCC3-206ENST00000462306 A0A087WVE0 104 aa7.57□□□□□ -1.2
ERCC3-206ENST00000462306 TRAV22A0A0B4J277 110 aa7.56□□□□□ -1.2
ERCC3-206ENST00000462306 KRTAP9-3Q9BYQ3 159 aa7.56□□□□□ -1.2
ERCC3-206ENST00000462306 CYP4F30PQ9H0H9 118 aa7.54□□□□□ -1.2
ERCC3-206ENST00000462306 J3QR89 54 aa7.53□□□□□ -1.2
ERCC3-206ENST00000462306 C1orf64Q8NEQ6 169 aa7.53□□□□□ -1.2
ERCC3-206ENST00000462306 USH2AO75445 5202 aa7.52□□□□□ -1.21
ERCC3-206ENST00000462306 UQCRQO14949 82 aa7.52□□□□□ -1.21
ERCC3-206ENST00000462306 LOC101927531A0A1B0GV80 90 aa7.5□□□□□ -1.21
ERCC3-206ENST00000462306 LCE2BO14633 110 aa7.49□□□□□ -1.21
ERCC3-206ENST00000462306 H0Y9P7 68 aa7.47□□□□□ -1.21
ERCC3-206ENST00000462306 ATOX1O00244 68 aa7.45□□□□□ -1.22
ERCC3-206ENST00000462306 OCR1Q9BZK8 76 aa7.44□□□□□ -1.22
ERCC3-206ENST00000462306 S4R3F8 94 aa7.44□□□□□ -1.22
ERCC3-206ENST00000462306 C5orf47Q569G3 176 aa7.42□□□□□ -1.22
ERCC3-206ENST00000462306 LCA10Q71F78 164 aa7.41□□□□□ -1.22
ERCC3-206ENST00000462306 SSPOA2VEC9 5147 aa7.4□□□□□ -1.22
ERCC3-206ENST00000462306 CSAG1Q6PB30 78 aa7.37□□□□□ -1.23
ERCC3-206ENST00000462306 LINC00208Q96KT6 92 aa7.37□□□□□ -1.23
ERCC3-206ENST00000462306 KRTAP3-3Q9BYR6 98 aa7.35□□□□□ -1.23
ERCC3-206ENST00000462306 MP68P56378 58 aa7.34□□□□□ -1.23
ERCC3-206ENST00000462306 K7ERU9 68 aa7.33□□□□□ -1.24
ERCC3-206ENST00000462306 KLKP1Q107X0 134 aa7.33□□□□□ -1.24
ERCC3-206ENST00000462306 MT-ATP8P03928 68 aa7.3□□□□□ -1.24
ERCC3-206ENST00000462306 IMUPQ9GZP8 106 aa7.3□□□□□ -1.24
ERCC3-206ENST00000462306 SCGB1A1P11684 91 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms