RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 KRTAP1-4P0C5Y4 121 aa3.11□□□□□ -1.91
SPTA1-202ENST00000461624 KRTAP19-2Q3LHN2 52 aa3.11□□□□□ -1.91
SPTA1-202ENST00000461624 SND1-IT1Q9HBX3 110 aa3.11□□□□□ -1.91
SPTA1-202ENST00000461624 C22orf24Q9Y442 160 aa3.11□□□□□ -1.91
SPTA1-202ENST00000461624 A0A087WVE0 104 aa3.1□□□□□ -1.91
SPTA1-202ENST00000461624 TRBV10-1A0A0K0K1A3 114 aa3.1□□□□□ -1.91
SPTA1-202ENST00000461624 NDUFS5O43920 106 aa3.1□□□□□ -1.91
SPTA1-202ENST00000461624 NDUFB1O75438 58 aa3.1□□□□□ -1.91
SPTA1-202ENST00000461624 UBE2BP63146 152 aa3.1□□□□□ -1.91
SPTA1-202ENST00000461624 Q1T7F1 81 aa3.1□□□□□ -1.91
SPTA1-202ENST00000461624 FAM74A4Q5TZK3 123 aa3.1□□□□□ -1.91
SPTA1-202ENST00000461624 MIR7-3HGQ8N6C7 128 aa3.1□□□□□ -1.91
SPTA1-202ENST00000461624 IGLV1-50A0A075B6I6 118 aa3.09□□□□□ -1.91
SPTA1-202ENST00000461624 MT1HP80294 61 aa3.09□□□□□ -1.91
SPTA1-202ENST00000461624 COX6A2Q02221 97 aa3.09□□□□□ -1.91
SPTA1-202ENST00000461624 TPRXLQ17RH7 258 aa3.09□□□□□ -1.91
SPTA1-202ENST00000461624 TMEM254Q8TBM7 123 aa3.09□□□□□ -1.91
SPTA1-202ENST00000461624 PRR34Q9NV39 138 aa3.09□□□□□ -1.91
SPTA1-202ENST00000461624 CDKN2A-AS1Q9UH64 79 aa3.09□□□□□ -1.91
SPTA1-202ENST00000461624 A0A096LNI7 61 aa3.08□□□□□ -1.92
SPTA1-202ENST00000461624 GNRH2O43555 120 aa3.08□□□□□ -1.92
SPTA1-202ENST00000461624 NREPQ16612 68 aa3.08□□□□□ -1.92
SPTA1-202ENST00000461624 SMIM11BQ8TCY0 68 aa3.08□□□□□ -1.92
SPTA1-202ENST00000461624 IGHV3-73A0A0B4J1V6 119 aa3.07□□□□□ -1.92
SPTA1-202ENST00000461624 IGKV2-24A0A0C4DH68 120 aa3.07□□□□□ -1.92
SPTA1-202ENST00000461624 IGKV2-29A2NJV5 120 aaPredicted RBP3.07□□□□□ -1.92
SPTA1-202ENST00000461624 UBE2L6O14933 153 aa3.07□□□□□ -1.92
SPTA1-202ENST00000461624 UBE2AP49459 152 aa3.07□□□□□ -1.92
SPTA1-202ENST00000461624 COX17Q14061 63 aa3.07□□□□□ -1.92
SPTA1-202ENST00000461624 SOSTDC1Q6X4U4 206 aa3.07□□□□□ -1.92
SPTA1-202ENST00000461624 KTN1-AS1Q86SY8 53 aa3.07□□□□□ -1.92
SPTA1-202ENST00000461624 COX7B2Q8TF08 81 aa3.07□□□□□ -1.92
SPTA1-202ENST00000461624 CHCHD10Q8WYQ3 142 aaPredicted RBP3.07□□□□□ -1.92
SPTA1-202ENST00000461624 IGLV10-54A0A075B6I4 117 aa3.06□□□□□ -1.92
SPTA1-202ENST00000461624 BPY2O14599 106 aa3.06□□□□□ -1.92
SPTA1-202ENST00000461624 NCR3O14931 201 aa3.06□□□□□ -1.92
SPTA1-202ENST00000461624 Q6ZQT0 140 aa3.06□□□□□ -1.92
SPTA1-202ENST00000461624 LINC00337Q8N6G1 96 aa3.06□□□□□ -1.92
SPTA1-202ENST00000461624 CYP4F30PQ9H0H9 118 aa3.06□□□□□ -1.92
SPTA1-202ENST00000461624 IGKV2-28A0A075B6P5 120 aa3.05□□□□□ -1.92
SPTA1-202ENST00000461624 RPL37AP8A6NKH3 93 aa3.05□□□□□ -1.92
SPTA1-202ENST00000461624 H0Y9J4 135 aa3.05□□□□□ -1.92
SPTA1-202ENST00000461624 IGKV2D-28P01615 120 aa3.05□□□□□ -1.92
SPTA1-202ENST00000461624 ELOF1P60002 83 aaKnown RBP3.05□□□□□ -1.92
SPTA1-202ENST00000461624 SS18Q15532 418 aa3.05□□□□□ -1.92
SPTA1-202ENST00000461624 ASB16-AS1Q495Z4 193 aa3.05□□□□□ -1.92
SPTA1-202ENST00000461624 NTM-AS1Q6ZSK4 140 aa3.05□□□□□ -1.92
SPTA1-202ENST00000461624 C15orf56Q8N910 161 aa3.05□□□□□ -1.92
SPTA1-202ENST00000461624 FAM104AQ969W3 186 aa3.05□□□□□ -1.92
SPTA1-202ENST00000461624 LIMD2Q9BT23 127 aa3.05□□□□□ -1.92
SPTA1-202ENST00000461624 hDV103S1A0JD37 113 aa3.04□□□□□ -1.92
SPTA1-202ENST00000461624 ANGP03950 147 aaKnown RBP3.04□□□□□ -1.92
SPTA1-202ENST00000461624 LINC00158P58513 81 aa3.04□□□□□ -1.92
SPTA1-202ENST00000461624 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.04□□□□□ -1.92
SPTA1-202ENST00000461624 DIRC1Q969H9 104 aa3.04□□□□□ -1.92
SPTA1-202ENST00000461624 H3BPC8 53 aa3.03□□□□□ -1.92
SPTA1-202ENST00000461624 CLPSL2Q6UWE3 100 aa3.03□□□□□ -1.92
SPTA1-202ENST00000461624 ATP11AUNQ6ZP68 121 aa3.03□□□□□ -1.92
SPTA1-202ENST00000461624 Q8IZM0 81 aa3.03□□□□□ -1.92
SPTA1-202ENST00000461624 CDC42SE2Q9NRR3 84 aa3.03□□□□□ -1.92
SPTA1-202ENST00000461624 LINC00474Q9P2X8 69 aa3.03□□□□□ -1.92
SPTA1-202ENST00000461624 SNURFQ9Y675 71 aa3.03□□□□□ -1.92
SPTA1-202ENST00000461624 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.02□□□□□ -1.93
SPTA1-202ENST00000461624 TRBV6-8A0A0A6YYG3 113 aa3.02□□□□□ -1.93
SPTA1-202ENST00000461624 IGLV7-43P04211 117 aa3.02□□□□□ -1.93
SPTA1-202ENST00000461624 COX7BP24311 80 aa3.02□□□□□ -1.93
SPTA1-202ENST00000461624 REG3AQ06141 175 aa3.02□□□□□ -1.93
SPTA1-202ENST00000461624 LINC00575Q6W349 94 aa3.02□□□□□ -1.93
SPTA1-202ENST00000461624 PHF5AQ7RTV0 110 aaKnown RBP3.02□□□□□ -1.93
SPTA1-202ENST00000461624 LINC00269Q8N2A0 174 aa3.02□□□□□ -1.93
SPTA1-202ENST00000461624 RETNLBQ9BQ08 111 aa3.02□□□□□ -1.93
SPTA1-202ENST00000461624 NEBP20929 6669 aa3.02□□□□□ -1.93
SPTA1-202ENST00000461624 C1orf137Q5JT78 98 aa3.01□□□□□ -1.93
SPTA1-202ENST00000461624 KRTAP11-1Q8IUC1 163 aa3.01□□□□□ -1.93
SPTA1-202ENST00000461624 SPANXA2-OT1Q8N9U9 137 aa3.01□□□□□ -1.93
SPTA1-202ENST00000461624 GVQW2A0A096LPI5 108 aaPredicted RBP3□□□□□ -1.93
SPTA1-202ENST00000461624 A0A1W2PNN7 141 aa3□□□□□ -1.93
SPTA1-202ENST00000461624 LCE3AQ5TA76 89 aa3□□□□□ -1.93
SPTA1-202ENST00000461624 C7orf65Q6ZTY9 151 aa3□□□□□ -1.93
SPTA1-202ENST00000461624 TYMSOSQ8TAI1 123 aa3□□□□□ -1.93
SPTA1-202ENST00000461624 Q9BRP9 147 aa3□□□□□ -1.93
SPTA1-202ENST00000461624 IGHV3OR16-9A0A0B4J2B5 98 aa2.99□□□□□ -1.93
SPTA1-202ENST00000461624 KRTAP13-3Q3SY46 172 aa2.99□□□□□ -1.93
SPTA1-202ENST00000461624 RNASE13Q5GAN3 156 aaKnown RBP2.99□□□□□ -1.93
SPTA1-202ENST00000461624 C9orf129Q5T035 196 aaKnown RBP2.99□□□□□ -1.93
SPTA1-202ENST00000461624 TRAV22A0A0B4J277 110 aa2.98□□□□□ -1.93
SPTA1-202ENST00000461624 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
SPTA1-202ENST00000461624 TOMM7Q9P0U1 55 aa2.98□□□□□ -1.93
SPTA1-202ENST00000461624 ETDCA0A1B0GVM5 59 aa2.97□□□□□ -1.93
SPTA1-202ENST00000461624 IGKV4-1P06312 121 aa2.97□□□□□ -1.93
SPTA1-202ENST00000461624 MP68P56378 58 aa2.97□□□□□ -1.93
SPTA1-202ENST00000461624 C6orf99Q4VX62 202 aa2.97□□□□□ -1.93
SPTA1-202ENST00000461624 LCA10Q71F78 164 aa2.97□□□□□ -1.93
SPTA1-202ENST00000461624 C1orf64Q8NEQ6 169 aa2.97□□□□□ -1.93
SPTA1-202ENST00000461624 ZCCHC13Q8WW36 166 aaKnown RBP2.97□□□□□ -1.93
SPTA1-202ENST00000461624 RBM12B-AS1Q9P1G2 102 aa2.97□□□□□ -1.93
SPTA1-202ENST00000461624 DHRS4-AS1Q9P1J3 65 aa2.97□□□□□ -1.93
SPTA1-202ENST00000461624 IGLV4-60A0A075B6I1 120 aa2.96□□□□□ -1.94
SPTA1-202ENST00000461624 A8MU10 97 aa2.96□□□□□ -1.94
SPTA1-202ENST00000461624 HCG22E2RYF7 251 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 201.8 ms