RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 C14orf132Q9NPU4 83 aa6.28□□□□□ -1.4
SSBP1-202ENST00000461433 TPRXLQ17RH7 258 aa6.27□□□□□ -1.41
SSBP1-202ENST00000461433 KRTAP13-3Q3SY46 172 aa6.26□□□□□ -1.41
SSBP1-202ENST00000461433 SS18L2Q9UHA2 77 aa6.26□□□□□ -1.41
SSBP1-202ENST00000461433 Q96NJ1 140 aa6.25□□□□□ -1.41
SSBP1-202ENST00000461433 KRTAP4-2Q9BYR5 136 aa6.25□□□□□ -1.41
SSBP1-202ENST00000461433 PDE6GP18545 87 aa6.24□□□□□ -1.41
SSBP1-202ENST00000461433 J3QR89 54 aa6.23□□□□□ -1.41
SSBP1-202ENST00000461433 KRTAP4-9Q9BYQ8 210 aa6.23□□□□□ -1.41
SSBP1-202ENST00000461433 F8W1H4 67 aa6.23□□□□□ -1.41
SSBP1-202ENST00000461433 UBR4Q5T4S7 5183 aa6.22□□□□□ -1.41
SSBP1-202ENST00000461433 LINC00472Q9H8W2 130 aa6.21□□□□□ -1.42
SSBP1-202ENST00000461433 A0A1B0GW54 56 aa6.2□□□□□ -1.42
SSBP1-202ENST00000461433 SCGB1A1P11684 91 aa6.2□□□□□ -1.42
SSBP1-202ENST00000461433 CDIP1Q9H305 208 aa6.2□□□□□ -1.42
SSBP1-202ENST00000461433 C9orf92A6NGG3 77 aa6.17□□□□□ -1.42
SSBP1-202ENST00000461433 DEFB116Q30KQ4 102 aa6.17□□□□□ -1.42
SSBP1-202ENST00000461433 ETDBQ3ZM63 59 aa6.17□□□□□ -1.42
SSBP1-202ENST00000461433 SIGMAR1Q99720 223 aa6.17□□□□□ -1.42
SSBP1-202ENST00000461433 IGKV4-1P06312 121 aa6.16□□□□□ -1.42
SSBP1-202ENST00000461433 NREPQ16612 68 aa6.11□□□□□ -1.43
SSBP1-202ENST00000461433 J3KT08 172 aa6.1□□□□□ -1.43
SSBP1-202ENST00000461433 NOTCH2NLQ7Z3S9 236 aa6.09□□□□□ -1.43
SSBP1-202ENST00000461433 LINC00846Q9NV44 126 aa6.09□□□□□ -1.43
SSBP1-202ENST00000461433 DSCR10P59022 87 aa6.08□□□□□ -1.44
SSBP1-202ENST00000461433 A0A1B0GVX0 72 aa6.07□□□□□ -1.44
SSBP1-202ENST00000461433 Q6ZVQ6 151 aa6.07□□□□□ -1.44
SSBP1-202ENST00000461433 MUC17Q685J3 4493 aa6.07□□□□□ -1.44
SSBP1-202ENST00000461433 IGHV6-1A0A0B4J1U7 121 aa6.07□□□□□ -1.44
SSBP1-202ENST00000461433 LINC00313P59037 77 aa6.07□□□□□ -1.44
SSBP1-202ENST00000461433 KRTAP16-1A8MUX0 517 aa6.06□□□□□ -1.44
SSBP1-202ENST00000461433 A8MWP4 228 aa6.06□□□□□ -1.44
SSBP1-202ENST00000461433 RNF213Q63HN8 5207 aa6.06□□□□□ -1.44
SSBP1-202ENST00000461433 IGKV3D-7A0A0C4DH55 119 aa6.05□□□□□ -1.44
SSBP1-202ENST00000461433 RPL37P61927 97 aaKnown RBP6.05□□□□□ -1.44
SSBP1-202ENST00000461433 SEC61BP60468 96 aaKnown RBP6.04□□□□□ -1.44
SSBP1-202ENST00000461433 C8orf87E5RJ46 101 aa6.03□□□□□ -1.44
SSBP1-202ENST00000461433 Q75L30 129 aa6.03□□□□□ -1.44
SSBP1-202ENST00000461433 C20orf166-AS1Q96NR2 134 aa6.03□□□□□ -1.44
SSBP1-202ENST00000461433 A8MUU9 505 aa6.02□□□□□ -1.45
SSBP1-202ENST00000461433 BPY2O14599 106 aa6.02□□□□□ -1.45
SSBP1-202ENST00000461433 NDUFB1O75438 58 aa6.02□□□□□ -1.45
SSBP1-202ENST00000461433 PCOTHQ58A44 107 aa6.02□□□□□ -1.45
SSBP1-202ENST00000461433 PRR15Q8IV56 129 aa6.02□□□□□ -1.45
SSBP1-202ENST00000461433 KRTAP4-1Q9BYQ7 146 aa6.02□□□□□ -1.45
SSBP1-202ENST00000461433 UBL5Q9BZL1 73 aa6.02□□□□□ -1.45
SSBP1-202ENST00000461433 K7EQZ3 153 aa6.01□□□□□ -1.45
SSBP1-202ENST00000461433 KRTAP5-3Q6L8H2 238 aa6□□□□□ -1.45
SSBP1-202ENST00000461433 C8orf17Q9NRJ1 99 aa6□□□□□ -1.45
SSBP1-202ENST00000461433 MUC2Q02817 5179 aa5.99□□□□□ -1.45
SSBP1-202ENST00000461433 FAM240AA0A1B0GVK7 77 aa5.99□□□□□ -1.45
SSBP1-202ENST00000461433 ACYP1P07311 99 aa5.99□□□□□ -1.45
SSBP1-202ENST00000461433 Q8N9L7 120 aa5.98□□□□□ -1.45
SSBP1-202ENST00000461433 MMP24-AS1A0A0U1RRL7 71 aa5.97□□□□□ -1.45
SSBP1-202ENST00000461433 MT-ATP8P03928 68 aa5.94□□□□□ -1.46
SSBP1-202ENST00000461433 ATP11AUNQ6ZP68 121 aa5.94□□□□□ -1.46
SSBP1-202ENST00000461433 Q8N9P0 234 aaPredicted RBP5.94□□□□□ -1.46
SSBP1-202ENST00000461433 CXCL6P80162 114 aa5.94□□□□□ -1.46
SSBP1-202ENST00000461433 ANAPC13Q9BS18 74 aa5.93□□□□□ -1.46
SSBP1-202ENST00000461433 TMEM254Q8TBM7 123 aa5.92□□□□□ -1.46
SSBP1-202ENST00000461433 hDV103S1A0JD37 113 aa5.91□□□□□ -1.46
SSBP1-202ENST00000461433 MRPL34Q9BQ48 92 aaKnown RBP5.91□□□□□ -1.46
SSBP1-202ENST00000461433 KRTAP4-11Q9BYQ6 195 aa5.91□□□□□ -1.46
SSBP1-202ENST00000461433 WFDC13Q8IUB5 93 aa5.89□□□□□ -1.47
SSBP1-202ENST00000461433 CASC2Q6XLA1 102 aa5.88□□□□□ -1.47
SSBP1-202ENST00000461433 KRTAP9-8Q9BYQ0 159 aa5.88□□□□□ -1.47
SSBP1-202ENST00000461433 HCG22E2RYF7 251 aa5.87□□□□□ -1.47
SSBP1-202ENST00000461433 LINC00643Q86TS7 51 aa5.87□□□□□ -1.47
SSBP1-202ENST00000461433 ZCCHC13Q8WW36 166 aaKnown RBP5.87□□□□□ -1.47
SSBP1-202ENST00000461433 ATP5EP2Q5VTU8 51 aa5.86□□□□□ -1.47
SSBP1-202ENST00000461433 SVIPQ8NHG7 77 aa5.86□□□□□ -1.47
SSBP1-202ENST00000461433 KRTAP19-2Q3LHN2 52 aa5.85□□□□□ -1.47
SSBP1-202ENST00000461433 NDUFS5O43920 106 aa5.82□□□□□ -1.48
SSBP1-202ENST00000461433 FAT4Q6V0I7 4981 aa5.81□□□□□ -1.48
SSBP1-202ENST00000461433 Q5W150 140 aa5.81□□□□□ -1.48
SSBP1-202ENST00000461433 IMUPQ9GZP8 106 aa5.81□□□□□ -1.48
SSBP1-202ENST00000461433 A0A0U1RQV1 116 aa5.8□□□□□ -1.48
SSBP1-202ENST00000461433 HIST1H4AP62805 103 aaKnown RBP5.8□□□□□ -1.48
SSBP1-202ENST00000461433 A0A087WVE0 104 aa5.78□□□□□ -1.48
SSBP1-202ENST00000461433 SPINK7P58062 85 aa5.77□□□□□ -1.49
SSBP1-202ENST00000461433 CCDC179H3BU77 68 aa5.76□□□□□ -1.49
SSBP1-202ENST00000461433 HRES1P13985 223 aa5.76□□□□□ -1.49
SSBP1-202ENST00000461433 MPLKIPQ8TAP9 179 aa5.75□□□□□ -1.49
SSBP1-202ENST00000461433 TP53AIP1Q9HCN2 124 aa5.73□□□□□ -1.49
SSBP1-202ENST00000461433 FAM236AA0A1B0GUQ0 79 aa5.72□□□□□ -1.49
SSBP1-202ENST00000461433 FAM236BA0A1B0GV22 79 aa5.72□□□□□ -1.49
SSBP1-202ENST00000461433 UQCRQO14949 82 aa5.69□□□□□ -1.5
SSBP1-202ENST00000461433 MT1HP80294 61 aa5.69□□□□□ -1.5
SSBP1-202ENST00000461433 ATOX1O00244 68 aa5.69□□□□□ -1.5
SSBP1-202ENST00000461433 COX6B2Q6YFQ2 88 aa5.69□□□□□ -1.5
SSBP1-202ENST00000461433 IGKV2D-30A0A075B6S6 120 aa5.68□□□□□ -1.5
SSBP1-202ENST00000461433 IGKV2-30P06310 120 aa5.68□□□□□ -1.5
SSBP1-202ENST00000461433 C7orf65Q6ZTY9 151 aa5.67□□□□□ -1.5
SSBP1-202ENST00000461433 SMIM20Q8N5G0 67 aa5.67□□□□□ -1.5
SSBP1-202ENST00000461433 RBM12B-AS1Q9P1G2 102 aa5.66□□□□□ -1.5
SSBP1-202ENST00000461433 FLGP20930 4061 aaPredicted RBP5.66□□□□□ -1.5
SSBP1-202ENST00000461433 COX7CP15954 63 aa5.65□□□□□ -1.51
SSBP1-202ENST00000461433 OCR1Q9BZK8 76 aa5.65□□□□□ -1.51
SSBP1-202ENST00000461433 TRAV22A0A0B4J277 110 aa5.64□□□□□ -1.51
SSBP1-202ENST00000461433 FAM236DA0A1B0GTK5 79 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms