RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 H0Y9P7 68 aa11.74□□□□□ -0.53
CCM2-203ENST00000461377 DYNC1H1Q14204 4646 aaKnown RBP11.74□□□□□ -0.53
CCM2-203ENST00000461377 PKHD1P08F94 4074 aa11.73□□□□□ -0.53
CCM2-203ENST00000461377 H3BPC8 53 aa11.72□□□□□ -0.53
CCM2-203ENST00000461377 Q5XG85 94 aa11.72□□□□□ -0.53
CCM2-203ENST00000461377 NOTCH2NLQ7Z3S9 236 aa11.71□□□□□ -0.53
CCM2-203ENST00000461377 LINC00208Q96KT6 92 aa11.71□□□□□ -0.53
CCM2-203ENST00000461377 TP53AIP1Q9HCN2 124 aa11.7□□□□□ -0.54
CCM2-203ENST00000461377 MRPL34Q9BQ48 92 aaKnown RBP11.69□□□□□ -0.54
CCM2-203ENST00000461377 RYR2Q92736 4967 aa11.69□□□□□ -0.54
CCM2-203ENST00000461377 TRAV22A0A0B4J277 110 aa11.68□□□□□ -0.54
CCM2-203ENST00000461377 PLA2G1BP04054 148 aaKnown RBP11.68□□□□□ -0.54
CCM2-203ENST00000461377 C1orf195Q5TG92 126 aa11.64□□□□□ -0.55
CCM2-203ENST00000461377 SMR3BP02814 79 aaPredicted RBP11.63□□□□□ -0.55
CCM2-203ENST00000461377 C1orf64Q8NEQ6 169 aa11.63□□□□□ -0.55
CCM2-203ENST00000461377 TYMSOSQ8TAI1 123 aa11.63□□□□□ -0.55
CCM2-203ENST00000461377 C8orf87E5RJ46 101 aa11.62□□□□□ -0.55
CCM2-203ENST00000461377 LIMD2Q9BT23 127 aa11.62□□□□□ -0.55
CCM2-203ENST00000461377 NDUFS5O43920 106 aa11.61□□□□□ -0.55
CCM2-203ENST00000461377 APOBP04114 4563 aaKnown RBP11.59□□□□□ -0.55
CCM2-203ENST00000461377 KRTAP10-4P60372 401 aaPredicted RBP11.56□□□□□ -0.56
CCM2-203ENST00000461377 C4orf48Q5BLP8 95 aa11.56□□□□□ -0.56
CCM2-203ENST00000461377 CYP4F30PQ9H0H9 118 aa11.56□□□□□ -0.56
CCM2-203ENST00000461377 SPINK1P00995 79 aa11.54□□□□□ -0.56
CCM2-203ENST00000461377 PRR26Q8N8Z3 221 aa11.54□□□□□ -0.56
CCM2-203ENST00000461377 LINC00313P59037 77 aa11.52□□□□□ -0.56
CCM2-203ENST00000461377 SPANXA2-OT1Q8N9U9 137 aa11.52□□□□□ -0.56
CCM2-203ENST00000461377 KMT2CQ8NEZ4 4911 aaKnown RBP11.52□□□□□ -0.57
CCM2-203ENST00000461377 SMIM26A0A096LP01 95 aa11.51□□□□□ -0.57
CCM2-203ENST00000461377 PRR4Q16378 134 aa11.5□□□□□ -0.57
CCM2-203ENST00000461377 LINC00304Q8N9R0 145 aa11.48□□□□□ -0.57
CCM2-203ENST00000461377 RPS29P62273 56 aaKnown RBP11.47□□□□□ -0.57
CCM2-203ENST00000461377 KRTAP13-3Q3SY46 172 aa11.47□□□□□ -0.57
CCM2-203ENST00000461377 PRO0628Q9UI54 55 aa11.46□□□□□ -0.58
CCM2-203ENST00000461377 FAT1Q14517 4588 aa11.46□□□□□ -0.58
CCM2-203ENST00000461377 Q5W150 140 aa11.45□□□□□ -0.58
CCM2-203ENST00000461377 SPAG11AQ6PDA7 123 aa11.45□□□□□ -0.58
CCM2-203ENST00000461377 FP248Q71RG6 208 aaPredicted RBP11.45□□□□□ -0.58
CCM2-203ENST00000461377 Q8N9P0 234 aaPredicted RBP11.45□□□□□ -0.58
CCM2-203ENST00000461377 KRTAP16-1A8MUX0 517 aa11.43□□□□□ -0.58
CCM2-203ENST00000461377 PCOTHQ58A44 107 aa11.41□□□□□ -0.58
CCM2-203ENST00000461377 IGLV7-46A0A075B6I9 117 aa11.4□□□□□ -0.58
CCM2-203ENST00000461377 LOC101927531A0A1B0GV80 90 aa11.39□□□□□ -0.59
CCM2-203ENST00000461377 C4orf26Q17RF5 130 aa11.39□□□□□ -0.59
CCM2-203ENST00000461377 FAM229AH3BQW9 127 aa11.36□□□□□ -0.59
CCM2-203ENST00000461377 PKHD1L1Q86WI1 4243 aa11.34□□□□□ -0.59
CCM2-203ENST00000461377 RETNLBQ9BQ08 111 aa11.27□□□□□ -0.61
CCM2-203ENST00000461377 MPLKIPQ8TAP9 179 aa11.26□□□□□ -0.61
CCM2-203ENST00000461377 RYR3Q15413 4870 aa11.23□□□□□ -0.61
CCM2-203ENST00000461377 IGKV2-30P06310 120 aa11.23□□□□□ -0.61
CCM2-203ENST00000461377 COA5Q86WW8 74 aa11.21□□□□□ -0.61
CCM2-203ENST00000461377 SEC61GP60059 68 aa11.2□□□□□ -0.62
CCM2-203ENST00000461377 Q1T7F1 81 aa11.19□□□□□ -0.62
CCM2-203ENST00000461377 Q5VSD8 79 aa11.19□□□□□ -0.62
CCM2-203ENST00000461377 HSPG2P98160 4391 aa11.18□□□□□ -0.62
CCM2-203ENST00000461377 V9GYY9 64 aa11.17□□□□□ -0.62
CCM2-203ENST00000461377 HRES1P13985 223 aa11.15□□□□□ -0.62
CCM2-203ENST00000461377 RYR1P21817 5038 aa11.12□□□□□ -0.63
CCM2-203ENST00000461377 KRTAP10-8P60410 259 aa11.1□□□□□ -0.63
CCM2-203ENST00000461377 Q8N1X5 172 aa11.09□□□□□ -0.63
CCM2-203ENST00000461377 C9orf92A6NGG3 77 aa11.08□□□□□ -0.64
CCM2-203ENST00000461377 IGKV2D-30A0A075B6S6 120 aa11.08□□□□□ -0.64
CCM2-203ENST00000461377 C20orf166-AS1Q96NR2 134 aa11.07□□□□□ -0.64
CCM2-203ENST00000461377 A8MUU9 505 aa11.06□□□□□ -0.64
CCM2-203ENST00000461377 DMAC1Q96GE9 116 aa11.06□□□□□ -0.64
CCM2-203ENST00000461377 KRTAP17-1Q9BYP8 105 aa11.05□□□□□ -0.64
CCM2-203ENST00000461377 TNXBP22105 4242 aa11.03□□□□□ -0.64
CCM2-203ENST00000461377 ACYP2P14621 99 aa11.03□□□□□ -0.64
CCM2-203ENST00000461377 FLG2Q5D862 2391 aaPredicted RBP11.02□□□□□ -0.64
CCM2-203ENST00000461377 LRP1Q07954 4544 aaKnown RBP11.01□□□□□ -0.65
CCM2-203ENST00000461377 C7orf65Q6ZTY9 151 aa10.99□□□□□ -0.65
CCM2-203ENST00000461377 PSPHP1O15172 72 aa10.98□□□□□ -0.65
CCM2-203ENST00000461377 FAT3Q8TDW7 4589 aa10.98□□□□□ -0.65
CCM2-203ENST00000461377 A8MUN3 132 aa10.95□□□□□ -0.66
CCM2-203ENST00000461377 KIAA1109Q2LD37 5005 aa10.92□□□□□ -0.66
CCM2-203ENST00000461377 Q5VV11 94 aa10.9□□□□□ -0.66
CCM2-203ENST00000461377 LINC01558Q9Y6Z2 57 aa10.9□□□□□ -0.66
CCM2-203ENST00000461377 Q75L30 129 aa10.89□□□□□ -0.67
CCM2-203ENST00000461377 PRR15LQ9BU68 103 aa10.89□□□□□ -0.67
CCM2-203ENST00000461377 CHKB-CPT1BH3BT56 60 aa10.86□□□□□ -0.67
CCM2-203ENST00000461377 BRK1Q8WUW1 75 aa10.86□□□□□ -0.67
CCM2-203ENST00000461377 MT1HL1P0DM35 61 aa10.85□□□□□ -0.67
CCM2-203ENST00000461377 EPPK1P58107 5090 aaKnown RBP10.82□□□□□ -0.68
CCM2-203ENST00000461377 PMAIP1Q13794 54 aa10.79□□□□□ -0.68
CCM2-203ENST00000461377 SPINK7P58062 85 aa10.77□□□□□ -0.69
CCM2-203ENST00000461377 MYCBP2O75592 4640 aa10.71□□□□□ -0.7
CCM2-203ENST00000461377 RPL37P61927 97 aaKnown RBP10.7□□□□□ -0.7
CCM2-203ENST00000461377 DMBT1Q9UGM3 2413 aaPredicted RBP10.7□□□□□ -0.7
CCM2-203ENST00000461377 XP32Q5T750 250 aa10.69□□□□□ -0.7
CCM2-203ENST00000461377 ATP11AUNQ6ZP68 121 aa10.68□□□□□ -0.7
CCM2-203ENST00000461377 KRTAP3-1Q9BYR8 98 aa10.65□□□□□ -0.7
CCM2-203ENST00000461377 A6NED7 52 aa10.62□□□□□ -0.71
CCM2-203ENST00000461377 KRTAP4-5Q9BYR2 181 aa10.6□□□□□ -0.71
CCM2-203ENST00000461377 A0A1B0GU69 56 aa10.57□□□□□ -0.72
CCM2-203ENST00000461377 A8MU10 97 aa10.57□□□□□ -0.72
CCM2-203ENST00000461377 COX6B2Q6YFQ2 88 aa10.57□□□□□ -0.72
CCM2-203ENST00000461377 LCA10Q71F78 164 aa10.55□□□□□ -0.72
CCM2-203ENST00000461377 SPTSSBQ8NFR3 76 aa10.52□□□□□ -0.73
CCM2-203ENST00000461377 CDC42SE1Q9NRR8 79 aa10.51□□□□□ -0.73
CCM2-203ENST00000461377 TPRXLQ17RH7 258 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms