RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 CAMK2N2Q96S95 79 aa3.09□□□□□ -1.91
SF3A3-202ENST00000460925 C6orf48Q9UBA6 75 aa3.09□□□□□ -1.91
SF3A3-202ENST00000460925 C22orf24Q9Y442 160 aa3.09□□□□□ -1.91
SF3A3-202ENST00000460925 SNURFQ9Y675 71 aa3.09□□□□□ -1.91
SF3A3-202ENST00000460925 VPS13BQ7Z7G8 4022 aa3.08□□□□□ -1.92
SF3A3-202ENST00000460925 KRTAP10-1P60331 282 aa3.08□□□□□ -1.92
SF3A3-202ENST00000460925 C9orf129Q5T035 196 aaKnown RBP3.08□□□□□ -1.92
SF3A3-202ENST00000460925 RYR1P21817 5038 aa3.07□□□□□ -1.92
SF3A3-202ENST00000460925 A0A096LNI7 61 aa3.07□□□□□ -1.92
SF3A3-202ENST00000460925 IGKV2-24A0A0C4DH68 120 aa3.07□□□□□ -1.92
SF3A3-202ENST00000460925 ZNF815PA8K554 130 aa3.07□□□□□ -1.92
SF3A3-202ENST00000460925 NDUFA1O15239 70 aa3.07□□□□□ -1.92
SF3A3-202ENST00000460925 FAT1Q14517 4588 aa3.07□□□□□ -1.92
SF3A3-202ENST00000460925 ROMO1P60602 79 aa3.06□□□□□ -1.92
SF3A3-202ENST00000460925 CNBPP62633 177 aaKnown RBP3.06□□□□□ -1.92
SF3A3-202ENST00000460925 PKHD1L1Q86WI1 4243 aa3.06□□□□□ -1.92
SF3A3-202ENST00000460925 C9orf163Q8N9P6 203 aa3.06□□□□□ -1.92
SF3A3-202ENST00000460925 Q8NDZ9 215 aa3.06□□□□□ -1.92
SF3A3-202ENST00000460925 XAGE1AQ9HD64 81 aa3.06□□□□□ -1.92
SF3A3-202ENST00000460925 BIRC6Q9NR09 4857 aa3.06□□□□□ -1.92
SF3A3-202ENST00000460925 TRAV23DV6A0A075B6W5 121 aa3.05□□□□□ -1.92
SF3A3-202ENST00000460925 A0A0J9YXY3 114 aa3.05□□□□□ -1.92
SF3A3-202ENST00000460925 LOC101927531A0A1B0GV80 90 aa3.05□□□□□ -1.92
SF3A3-202ENST00000460925 CHKB-CPT1BH3BT56 60 aa3.05□□□□□ -1.92
SF3A3-202ENST00000460925 LINC00158P58513 81 aa3.05□□□□□ -1.92
SF3A3-202ENST00000460925 MIR7-3HGQ8N6C7 128 aa3.05□□□□□ -1.92
SF3A3-202ENST00000460925 KIAA1109Q2LD37 5005 aa3.04□□□□□ -1.92
SF3A3-202ENST00000460925 OBSCN-AS1Q96MR7 158 aa3.04□□□□□ -1.92
SF3A3-202ENST00000460925 LINC00846Q9NV44 126 aa3.04□□□□□ -1.92
SF3A3-202ENST00000460925 A0A1W2PNN7 141 aa3.03□□□□□ -1.92
SF3A3-202ENST00000460925 C1orf64Q8NEQ6 169 aa3.03□□□□□ -1.92
SF3A3-202ENST00000460925 SPACA4Q8TDM5 124 aa3.03□□□□□ -1.92
SF3A3-202ENST00000460925 LIMD2Q9BT23 127 aa3.03□□□□□ -1.92
SF3A3-202ENST00000460925 NCR3O14931 201 aa3.02□□□□□ -1.93
SF3A3-202ENST00000460925 P0C880 135 aa3.02□□□□□ -1.93
SF3A3-202ENST00000460925 TLX1NBP0CAT3 122 aa3.02□□□□□ -1.93
SF3A3-202ENST00000460925 Q6ZSA8 131 aa3.02□□□□□ -1.93
SF3A3-202ENST00000460925 TMEM254Q8TBM7 123 aa3.02□□□□□ -1.93
SF3A3-202ENST00000460925 SMR3BP02814 79 aaPredicted RBP3.01□□□□□ -1.93
SF3A3-202ENST00000460925 COX6CP09669 75 aa3.01□□□□□ -1.93
SF3A3-202ENST00000460925 CASC2Q6XLA1 102 aa3.01□□□□□ -1.93
SF3A3-202ENST00000460925 KRTAP11-1Q8IUC1 163 aa3.01□□□□□ -1.93
SF3A3-202ENST00000460925 CIRBP-AS1Q8TBR5 109 aa3.01□□□□□ -1.93
SF3A3-202ENST00000460925 LINC00308Q8TCZ7 52 aa3.01□□□□□ -1.93
SF3A3-202ENST00000460925 C8orf17Q9NRJ1 99 aa3.01□□□□□ -1.93
SF3A3-202ENST00000460925 A8MWP4 228 aa3□□□□□ -1.93
SF3A3-202ENST00000460925 COX17Q14061 63 aa3□□□□□ -1.93
SF3A3-202ENST00000460925 MUSTN1Q8IVN3 82 aa3□□□□□ -1.93
SF3A3-202ENST00000460925 IGKV2-28A0A075B6P5 120 aa2.99□□□□□ -1.93
SF3A3-202ENST00000460925 DNAL4O96015 105 aa2.99□□□□□ -1.93
SF3A3-202ENST00000460925 IGKV2D-28P01615 120 aa2.99□□□□□ -1.93
SF3A3-202ENST00000460925 PLAC8Q9NZF1 115 aa2.99□□□□□ -1.93
SF3A3-202ENST00000460925 HERC2O95714 4834 aa2.98□□□□□ -1.93
SF3A3-202ENST00000460925 A0A1W2PNM2 257 aa2.98□□□□□ -1.93
SF3A3-202ENST00000460925 A6NED7 52 aa2.98□□□□□ -1.93
SF3A3-202ENST00000460925 LUZP6Q538Z0 58 aa2.98□□□□□ -1.93
SF3A3-202ENST00000460925 LINC00167Q96N53 147 aa2.98□□□□□ -1.93
SF3A3-202ENST00000460925 FAT3Q8TDW7 4589 aa2.97□□□□□ -1.93
SF3A3-202ENST00000460925 KRTAP10-12P60413 245 aa2.97□□□□□ -1.93
SF3A3-202ENST00000460925 NREPQ16612 68 aa2.97□□□□□ -1.93
SF3A3-202ENST00000460925 Q6ZQT0 140 aa2.97□□□□□ -1.93
SF3A3-202ENST00000460925 PRR15LQ9BU68 103 aa2.97□□□□□ -1.93
SF3A3-202ENST00000460925 H7C2G1 150 aa2.96□□□□□ -1.94
SF3A3-202ENST00000460925 KRTAP1-4P0C5Y4 121 aa2.96□□□□□ -1.94
SF3A3-202ENST00000460925 ZCCHC13Q8WW36 166 aaKnown RBP2.96□□□□□ -1.94
SF3A3-202ENST00000460925 PSORS1C2Q9UIG4 136 aa2.96□□□□□ -1.94
SF3A3-202ENST00000460925 Q5VSD8 79 aa2.95□□□□□ -1.94
SF3A3-202ENST00000460925 CSAG1Q6PB30 78 aa2.95□□□□□ -1.94
SF3A3-202ENST00000460925 LRP1Q07954 4544 aaKnown RBP2.95□□□□□ -1.94
SF3A3-202ENST00000460925 ABCA13Q86UQ4 5058 aa2.94□□□□□ -1.94
SF3A3-202ENST00000460925 IGLV1-50A0A075B6I6 118 aa2.94□□□□□ -1.94
SF3A3-202ENST00000460925 IGLV6-57P01721 117 aa2.94□□□□□ -1.94
SF3A3-202ENST00000460925 KRTAP10-4P60372 401 aaPredicted RBP2.94□□□□□ -1.94
SF3A3-202ENST00000460925 RPL37AP61513 92 aaKnown RBP2.94□□□□□ -1.94
SF3A3-202ENST00000460925 PRLHP81277 87 aa2.94□□□□□ -1.94
SF3A3-202ENST00000460925 C1orf137Q5JT78 98 aa2.94□□□□□ -1.94
SF3A3-202ENST00000460925 Q9BRP9 147 aa2.94□□□□□ -1.94
SF3A3-202ENST00000460925 TNXBP22105 4242 aa2.94□□□□□ -1.94
SF3A3-202ENST00000460925 A0A087WSZ3 146 aa2.93□□□□□ -1.94
SF3A3-202ENST00000460925 ELOF1P60002 83 aaKnown RBP2.93□□□□□ -1.94
SF3A3-202ENST00000460925 MIR22HGQ0VDD5 57 aa2.93□□□□□ -1.94
SF3A3-202ENST00000460925 SMIM11BQ8TCY0 68 aa2.93□□□□□ -1.94
SF3A3-202ENST00000460925 C20orf166-AS1Q96NR2 134 aa2.93□□□□□ -1.94
SF3A3-202ENST00000460925 MYCBP2O75592 4640 aa2.92□□□□□ -1.94
SF3A3-202ENST00000460925 C14orf132Q9NPU4 83 aa2.92□□□□□ -1.94
SF3A3-202ENST00000460925 ETDCA0A1B0GVM5 59 aa2.91□□□□□ -1.94
SF3A3-202ENST00000460925 A0A1B0GVX0 72 aa2.91□□□□□ -1.94
SF3A3-202ENST00000460925 SPRR1AP35321 89 aa2.91□□□□□ -1.94
SF3A3-202ENST00000460925 LINC00483Q53H64 154 aa2.91□□□□□ -1.94
SF3A3-202ENST00000460925 CAMK2N1Q7Z7J9 78 aa2.91□□□□□ -1.94
SF3A3-202ENST00000460925 HIGD2AQ9BW72 106 aa2.91□□□□□ -1.94
SF3A3-202ENST00000460925 KCNQ1DNQ9H478 68 aa2.91□□□□□ -1.94
SF3A3-202ENST00000460925 LINC01558Q9Y6Z2 57 aa2.91□□□□□ -1.94
SF3A3-202ENST00000460925 FLG2Q5D862 2391 aaPredicted RBP2.91□□□□□ -1.94
SF3A3-202ENST00000460925 SRRM2Q9UQ35 2752 aaKnown RBP2.9□□□□□ -1.94
SF3A3-202ENST00000460925 IGLV7-43P04211 117 aa2.9□□□□□ -1.95
SF3A3-202ENST00000460925 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.9□□□□□ -1.95
SF3A3-202ENST00000460925 KRTAP13-1Q8IUC0 172 aa2.9□□□□□ -1.95
SF3A3-202ENST00000460925 ANAPC11Q9NYG5 84 aa2.9□□□□□ -1.95
SF3A3-202ENST00000460925 A8MUU9 505 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 224 ms