RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 WFDC13Q8IUB5 93 aa9.94□□□□□ -0.82
YIPF3-205ENST00000460547 VPS13BQ7Z7G8 4022 aa9.93□□□□□ -0.82
YIPF3-205ENST00000460547 MMP24-AS1A0A0U1RRL7 71 aa9.92□□□□□ -0.82
YIPF3-205ENST00000460547 C5orf47Q569G3 176 aa9.9□□□□□ -0.82
YIPF3-205ENST00000460547 RPS28P62857 69 aaKnown RBP9.9□□□□□ -0.83
YIPF3-205ENST00000460547 FAM236DA0A1B0GTK5 79 aa9.89□□□□□ -0.83
YIPF3-205ENST00000460547 FAM236CP0DP71 79 aa9.89□□□□□ -0.83
YIPF3-205ENST00000460547 ASB16-AS1Q495Z4 193 aa9.89□□□□□ -0.83
YIPF3-205ENST00000460547 A0A087X002 238 aa9.87□□□□□ -0.83
YIPF3-205ENST00000460547 A0A1B0GVX0 72 aa9.87□□□□□ -0.83
YIPF3-205ENST00000460547 KRTAP1-4P0C5Y4 121 aa9.87□□□□□ -0.83
YIPF3-205ENST00000460547 KRTAP10-4P60372 401 aaPredicted RBP9.87□□□□□ -0.83
YIPF3-205ENST00000460547 KRTAP13-2Q52LG2 175 aa9.87□□□□□ -0.83
YIPF3-205ENST00000460547 ZCCHC13Q8WW36 166 aaKnown RBP9.87□□□□□ -0.83
YIPF3-205ENST00000460547 ATP5EP56381 51 aaPredicted RBP9.85□□□□□ -0.83
YIPF3-205ENST00000460547 C8orf17Q9NRJ1 99 aa9.85□□□□□ -0.83
YIPF3-205ENST00000460547 hDV103S1A0JD37 113 aa9.84□□□□□ -0.83
YIPF3-205ENST00000460547 Q5XG85 94 aa9.84□□□□□ -0.83
YIPF3-205ENST00000460547 J3QL48 77 aa9.83□□□□□ -0.84
YIPF3-205ENST00000460547 FLG2Q5D862 2391 aaPredicted RBP9.82□□□□□ -0.84
YIPF3-205ENST00000460547 H3BPC8 53 aa9.8□□□□□ -0.84
YIPF3-205ENST00000460547 MP68P56378 58 aa9.8□□□□□ -0.84
YIPF3-205ENST00000460547 SPINK6Q6UWN8 80 aa9.8□□□□□ -0.84
YIPF3-205ENST00000460547 IGHV6-1A0A0B4J1U7 121 aa9.79□□□□□ -0.84
YIPF3-205ENST00000460547 MYCBP2O75592 4640 aa9.78□□□□□ -0.84
YIPF3-205ENST00000460547 TP53AIP1Q9HCN2 124 aa9.77□□□□□ -0.84
YIPF3-205ENST00000460547 OXTP01178 125 aa9.76□□□□□ -0.85
YIPF3-205ENST00000460547 SERP1Q9Y6X1 66 aa9.76□□□□□ -0.85
YIPF3-205ENST00000460547 H0Y9P7 68 aa9.75□□□□□ -0.85
YIPF3-205ENST00000460547 MRPL34Q9BQ48 92 aaKnown RBP9.74□□□□□ -0.85
YIPF3-205ENST00000460547 LIMD2Q9BT23 127 aa9.74□□□□□ -0.85
YIPF3-205ENST00000460547 TRAV22A0A0B4J277 110 aa9.73□□□□□ -0.85
YIPF3-205ENST00000460547 DMBT1Q9UGM3 2413 aaPredicted RBP9.72□□□□□ -0.85
YIPF3-205ENST00000460547 C8orf87E5RJ46 101 aa9.72□□□□□ -0.85
YIPF3-205ENST00000460547 C1orf195Q5TG92 126 aa9.71□□□□□ -0.86
YIPF3-205ENST00000460547 NOTCH2NLQ7Z3S9 236 aa9.71□□□□□ -0.86
YIPF3-205ENST00000460547 LINC00208Q96KT6 92 aa9.71□□□□□ -0.86
YIPF3-205ENST00000460547 TYMSOSQ8TAI1 123 aa9.7□□□□□ -0.86
YIPF3-205ENST00000460547 SPINK1P00995 79 aa9.67□□□□□ -0.86
YIPF3-205ENST00000460547 LRP1Q07954 4544 aaKnown RBP9.66□□□□□ -0.86
YIPF3-205ENST00000460547 HERC1Q15751 4861 aa9.65□□□□□ -0.86
YIPF3-205ENST00000460547 C4orf48Q5BLP8 95 aa9.65□□□□□ -0.86
YIPF3-205ENST00000460547 C1orf64Q8NEQ6 169 aa9.65□□□□□ -0.86
YIPF3-205ENST00000460547 RPS29P62273 56 aaKnown RBP9.64□□□□□ -0.87
YIPF3-205ENST00000460547 PKHD1L1Q86WI1 4243 aa9.62□□□□□ -0.87
YIPF3-205ENST00000460547 NDUFS5O43920 106 aa9.62□□□□□ -0.87
YIPF3-205ENST00000460547 CYP4F30PQ9H0H9 118 aa9.62□□□□□ -0.87
YIPF3-205ENST00000460547 FAT3Q8TDW7 4589 aa9.62□□□□□ -0.87
YIPF3-205ENST00000460547 SPAG11AQ6PDA7 123 aa9.61□□□□□ -0.87
YIPF3-205ENST00000460547 PRR26Q8N8Z3 221 aa9.61□□□□□ -0.87
YIPF3-205ENST00000460547 SPANXA2-OT1Q8N9U9 137 aa9.61□□□□□ -0.87
YIPF3-205ENST00000460547 LINC00313P59037 77 aa9.6□□□□□ -0.87
YIPF3-205ENST00000460547 LINC00304Q8N9R0 145 aa9.59□□□□□ -0.87
YIPF3-205ENST00000460547 KRTAP13-3Q3SY46 172 aa9.56□□□□□ -0.88
YIPF3-205ENST00000460547 Q8N9P0 234 aaPredicted RBP9.56□□□□□ -0.88
YIPF3-205ENST00000460547 MT1HL1P0DM35 61 aa9.55□□□□□ -0.88
YIPF3-205ENST00000460547 SMIM26A0A096LP01 95 aa9.54□□□□□ -0.88
YIPF3-205ENST00000460547 KRTAP16-1A8MUX0 517 aa9.53□□□□□ -0.88
YIPF3-205ENST00000460547 LOC101927531A0A1B0GV80 90 aa9.51□□□□□ -0.89
YIPF3-205ENST00000460547 Q5W150 140 aa9.49□□□□□ -0.89
YIPF3-205ENST00000460547 KRTAP10-8P60410 259 aa9.48□□□□□ -0.89
YIPF3-205ENST00000460547 IGLV7-46A0A075B6I9 117 aa9.48□□□□□ -0.89
YIPF3-205ENST00000460547 PRR4Q16378 134 aa9.46□□□□□ -0.89
YIPF3-205ENST00000460547 FP248Q71RG6 208 aaPredicted RBP9.45□□□□□ -0.9
YIPF3-205ENST00000460547 PCOTHQ58A44 107 aa9.44□□□□□ -0.9
YIPF3-205ENST00000460547 TNXBP22105 4242 aa9.41□□□□□ -0.9
YIPF3-205ENST00000460547 C4orf26Q17RF5 130 aa9.36□□□□□ -0.91
YIPF3-205ENST00000460547 IGKV2-30P06310 120 aa9.35□□□□□ -0.91
YIPF3-205ENST00000460547 HMCN2Q8NDA2 5059 aa9.33□□□□□ -0.92
YIPF3-205ENST00000460547 COA5Q86WW8 74 aa9.3□□□□□ -0.92
YIPF3-205ENST00000460547 Q1T7F1 81 aa9.29□□□□□ -0.92
YIPF3-205ENST00000460547 RETNLBQ9BQ08 111 aa9.29□□□□□ -0.92
YIPF3-205ENST00000460547 MPLKIPQ8TAP9 179 aa9.27□□□□□ -0.93
YIPF3-205ENST00000460547 C20orf166-AS1Q96NR2 134 aa9.26□□□□□ -0.93
YIPF3-205ENST00000460547 A8MUU9 505 aa9.25□□□□□ -0.93
YIPF3-205ENST00000460547 HRES1P13985 223 aa9.25□□□□□ -0.93
YIPF3-205ENST00000460547 V9GYY9 64 aa9.23□□□□□ -0.93
YIPF3-205ENST00000460547 DMAC1Q96GE9 116 aa9.22□□□□□ -0.93
YIPF3-205ENST00000460547 IGKV2D-30A0A075B6S6 120 aa9.19□□□□□ -0.94
YIPF3-205ENST00000460547 C9orf92A6NGG3 77 aa9.19□□□□□ -0.94
YIPF3-205ENST00000460547 ACYP2P14621 99 aa9.17□□□□□ -0.94
YIPF3-205ENST00000460547 C7orf65Q6ZTY9 151 aa9.17□□□□□ -0.94
YIPF3-205ENST00000460547 Q75L30 129 aa9.12□□□□□ -0.95
YIPF3-205ENST00000460547 UBR4Q5T4S7 5183 aa9.12□□□□□ -0.95
YIPF3-205ENST00000460547 LRP2P98164 4655 aa9.09□□□□□ -0.95
YIPF3-205ENST00000460547 PSPHP1O15172 72 aa9.05□□□□□ -0.96
YIPF3-205ENST00000460547 A8MUN3 132 aa9.04□□□□□ -0.96
YIPF3-205ENST00000460547 LINC01558Q9Y6Z2 57 aa9.04□□□□□ -0.96
YIPF3-205ENST00000460547 CHKB-CPT1BH3BT56 60 aa9.02□□□□□ -0.97
YIPF3-205ENST00000460547 Q5VV11 94 aa9.02□□□□□ -0.97
YIPF3-205ENST00000460547 SVIPQ8NHG7 77 aa9.02□□□□□ -0.97
YIPF3-205ENST00000460547 LPAP08519 4548 aa9□□□□□ -0.97
YIPF3-205ENST00000460547 PRR15LQ9BU68 103 aa9□□□□□ -0.97
YIPF3-205ENST00000460547 SPINK7P58062 85 aa8.96□□□□□ -0.98
YIPF3-205ENST00000460547 RPL37P61927 97 aaKnown RBP8.95□□□□□ -0.98
YIPF3-205ENST00000460547 PRO0628Q9UI54 55 aa8.95□□□□□ -0.98
YIPF3-205ENST00000460547 BRK1Q8WUW1 75 aa8.94□□□□□ -0.98
YIPF3-205ENST00000460547 XP32Q5T750 250 aa8.92□□□□□ -0.98
YIPF3-205ENST00000460547 ATP11AUNQ6ZP68 121 aa8.91□□□□□ -0.98
YIPF3-205ENST00000460547 TPRXLQ17RH7 258 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms