RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 Q5XG85 94 aa4.37□□□□□ -1.71
ABCA4-202ENST00000460514 VPS25Q9BRG1 176 aa4.37□□□□□ -1.71
ABCA4-202ENST00000460514 LRP1Q07954 4544 aaKnown RBP4.37□□□□□ -1.71
ABCA4-202ENST00000460514 A0A1W2PNM2 257 aa4.36□□□□□ -1.71
ABCA4-202ENST00000460514 Q6ZQT0 140 aa4.36□□□□□ -1.71
ABCA4-202ENST00000460514 ETDBQ3ZM63 59 aa4.35□□□□□ -1.71
ABCA4-202ENST00000460514 KRTAP5-11Q6L8G4 156 aa4.35□□□□□ -1.71
ABCA4-202ENST00000460514 A0A087WSZ3 146 aa4.34□□□□□ -1.71
ABCA4-202ENST00000460514 ASB16-AS1Q495Z4 193 aa4.34□□□□□ -1.71
ABCA4-202ENST00000460514 TNXBP22105 4242 aa4.33□□□□□ -1.72
ABCA4-202ENST00000460514 FP248Q71RG6 208 aaPredicted RBP4.33□□□□□ -1.72
ABCA4-202ENST00000460514 PRR4Q16378 134 aa4.3□□□□□ -1.72
ABCA4-202ENST00000460514 PCLOQ9Y6V0 5065 aa4.29□□□□□ -1.72
ABCA4-202ENST00000460514 J3QR89 54 aa4.29□□□□□ -1.72
ABCA4-202ENST00000460514 NREPQ16612 68 aa4.29□□□□□ -1.72
ABCA4-202ENST00000460514 C1orf195Q5TG92 126 aa4.29□□□□□ -1.72
ABCA4-202ENST00000460514 RETNLBQ9BQ08 111 aa4.29□□□□□ -1.72
ABCA4-202ENST00000460514 IGLV7-46A0A075B6I9 117 aa4.28□□□□□ -1.72
ABCA4-202ENST00000460514 J3KT08 172 aa4.28□□□□□ -1.72
ABCA4-202ENST00000460514 ACYP1P07311 99 aa4.28□□□□□ -1.72
ABCA4-202ENST00000460514 KRTAP10-7P60409 375 aaPredicted RBP4.28□□□□□ -1.72
ABCA4-202ENST00000460514 UBL5Q9BZL1 73 aa4.28□□□□□ -1.72
ABCA4-202ENST00000460514 FAM240AA0A1B0GVK7 77 aa4.27□□□□□ -1.73
ABCA4-202ENST00000460514 SIGMAR1Q99720 223 aa4.27□□□□□ -1.73
ABCA4-202ENST00000460514 IGKV4-1P06312 121 aa4.26□□□□□ -1.73
ABCA4-202ENST00000460514 LINC00472Q9H8W2 130 aa4.26□□□□□ -1.73
ABCA4-202ENST00000460514 NDUFB1O75438 58 aa4.25□□□□□ -1.73
ABCA4-202ENST00000460514 Q96NJ1 140 aa4.25□□□□□ -1.73
ABCA4-202ENST00000460514 LINC00846Q9NV44 126 aa4.25□□□□□ -1.73
ABCA4-202ENST00000460514 TPRXLQ17RH7 258 aa4.24□□□□□ -1.73
ABCA4-202ENST00000460514 Q6ZVQ6 151 aa4.24□□□□□ -1.73
ABCA4-202ENST00000460514 BPY2O14599 106 aa4.23□□□□□ -1.73
ABCA4-202ENST00000460514 DEFB116Q30KQ4 102 aa4.23□□□□□ -1.73
ABCA4-202ENST00000460514 K7ERU9 68 aa4.22□□□□□ -1.73
ABCA4-202ENST00000460514 KRTAP15-1Q3LI76 137 aa4.22□□□□□ -1.73
ABCA4-202ENST00000460514 A8MWP4 228 aa4.21□□□□□ -1.74
ABCA4-202ENST00000460514 C8orf87E5RJ46 101 aa4.21□□□□□ -1.74
ABCA4-202ENST00000460514 KRTAP13-3Q3SY46 172 aa4.21□□□□□ -1.74
ABCA4-202ENST00000460514 IGHV6-1A0A0B4J1U7 121 aa4.2□□□□□ -1.74
ABCA4-202ENST00000460514 A0A1B0GVX0 72 aa4.2□□□□□ -1.74
ABCA4-202ENST00000460514 ATP5EP2Q5VTU8 51 aa4.2□□□□□ -1.74
ABCA4-202ENST00000460514 LINC00313P59037 77 aa4.19□□□□□ -1.74
ABCA4-202ENST00000460514 CXCL6P80162 114 aa4.19□□□□□ -1.74
ABCA4-202ENST00000460514 C9orf92A6NGG3 77 aa4.18□□□□□ -1.74
ABCA4-202ENST00000460514 LINC00643Q86TS7 51 aa4.18□□□□□ -1.74
ABCA4-202ENST00000460514 PRR15Q8IV56 129 aa4.18□□□□□ -1.74
ABCA4-202ENST00000460514 IGKV3D-7A0A0C4DH55 119 aa4.17□□□□□ -1.74
ABCA4-202ENST00000460514 DSCR10P59022 87 aa4.17□□□□□ -1.74
ABCA4-202ENST00000460514 K7EQZ3 153 aa4.15□□□□□ -1.75
ABCA4-202ENST00000460514 C8orf17Q9NRJ1 99 aa4.15□□□□□ -1.75
ABCA4-202ENST00000460514 HERC1Q15751 4861 aa4.15□□□□□ -1.75
ABCA4-202ENST00000460514 hDV103S1A0JD37 113 aa4.13□□□□□ -1.75
ABCA4-202ENST00000460514 SEC61BP60468 96 aaKnown RBP4.13□□□□□ -1.75
ABCA4-202ENST00000460514 Q75L30 129 aa4.13□□□□□ -1.75
ABCA4-202ENST00000460514 Q8N9L7 120 aa4.13□□□□□ -1.75
ABCA4-202ENST00000460514 MMP24-AS1A0A0U1RRL7 71 aa4.12□□□□□ -1.75
ABCA4-202ENST00000460514 HIST1H4AP62805 103 aaKnown RBP4.12□□□□□ -1.75
ABCA4-202ENST00000460514 TMEM254Q8TBM7 123 aa4.12□□□□□ -1.75
ABCA4-202ENST00000460514 C20orf166-AS1Q96NR2 134 aa4.12□□□□□ -1.75
ABCA4-202ENST00000460514 HCG22E2RYF7 251 aa4.11□□□□□ -1.75
ABCA4-202ENST00000460514 RPL37P61927 97 aaKnown RBP4.11□□□□□ -1.75
ABCA4-202ENST00000460514 CASC2Q6XLA1 102 aa4.11□□□□□ -1.75
ABCA4-202ENST00000460514 NOTCH2NLQ7Z3S9 236 aa4.11□□□□□ -1.75
ABCA4-202ENST00000460514 MRPL34Q9BQ48 92 aaKnown RBP4.11□□□□□ -1.75
ABCA4-202ENST00000460514 A8MUU9 505 aa4.1□□□□□ -1.75
ABCA4-202ENST00000460514 KRTAP16-1A8MUX0 517 aa4.1□□□□□ -1.75
ABCA4-202ENST00000460514 ATP11AUNQ6ZP68 121 aa4.1□□□□□ -1.75
ABCA4-202ENST00000460514 WFDC13Q8IUB5 93 aa4.1□□□□□ -1.75
ABCA4-202ENST00000460514 Q8N9P0 234 aaPredicted RBP4.09□□□□□ -1.75
ABCA4-202ENST00000460514 NDUFS5O43920 106 aa4.08□□□□□ -1.76
ABCA4-202ENST00000460514 HMCN2Q8NDA2 5059 aa4.08□□□□□ -1.76
ABCA4-202ENST00000460514 IMUPQ9GZP8 106 aa4.08□□□□□ -1.76
ABCA4-202ENST00000460514 PCOTHQ58A44 107 aa4.05□□□□□ -1.76
ABCA4-202ENST00000460514 TP53AIP1Q9HCN2 124 aa4.05□□□□□ -1.76
ABCA4-202ENST00000460514 LPAP08519 4548 aa4.05□□□□□ -1.76
ABCA4-202ENST00000460514 MT-ATP8P03928 68 aa4.04□□□□□ -1.76
ABCA4-202ENST00000460514 ZCCHC13Q8WW36 166 aaKnown RBP4.04□□□□□ -1.76
ABCA4-202ENST00000460514 LRP2P98164 4655 aa4.03□□□□□ -1.76
ABCA4-202ENST00000460514 A0A087WVE0 104 aa4.03□□□□□ -1.76
ABCA4-202ENST00000460514 SCGB1A1P11684 91 aa4.02□□□□□ -1.77
ABCA4-202ENST00000460514 KRTAP5-9P26371 169 aa4.02□□□□□ -1.77
ABCA4-202ENST00000460514 KRTAP10-6P60371 365 aaPredicted RBP4.02□□□□□ -1.77
ABCA4-202ENST00000460514 KRTAP5-1Q6L8H4 278 aa4□□□□□ -1.77
ABCA4-202ENST00000460514 UQCRQO14949 82 aa3.99□□□□□ -1.77
ABCA4-202ENST00000460514 SMIM20Q8N5G0 67 aa3.98□□□□□ -1.77
ABCA4-202ENST00000460514 TRAV22A0A0B4J277 110 aa3.97□□□□□ -1.77
ABCA4-202ENST00000460514 A0A0U1RQV1 116 aa3.97□□□□□ -1.77
ABCA4-202ENST00000460514 FAM236AA0A1B0GUQ0 79 aa3.97□□□□□ -1.77
ABCA4-202ENST00000460514 FAM236BA0A1B0GV22 79 aa3.97□□□□□ -1.77
ABCA4-202ENST00000460514 ATOX1O00244 68 aa3.97□□□□□ -1.77
ABCA4-202ENST00000460514 MUC17Q685J3 4493 aa3.96□□□□□ -1.78
ABCA4-202ENST00000460514 Q5W150 140 aa3.96□□□□□ -1.78
ABCA4-202ENST00000460514 C7orf65Q6ZTY9 151 aa3.96□□□□□ -1.78
ABCA4-202ENST00000460514 MP68P56378 58 aa3.95□□□□□ -1.78
ABCA4-202ENST00000460514 SPINK7P58062 85 aa3.95□□□□□ -1.78
ABCA4-202ENST00000460514 KRTAP5-4Q6L8H1 288 aa3.95□□□□□ -1.78
ABCA4-202ENST00000460514 OCR1Q9BZK8 76 aa3.95□□□□□ -1.78
ABCA4-202ENST00000460514 IGKV2D-30A0A075B6S6 120 aa3.94□□□□□ -1.78
ABCA4-202ENST00000460514 H0Y9P7 68 aa3.94□□□□□ -1.78
ABCA4-202ENST00000460514 IGKV2-30P06310 120 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms