RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 Q6ZQT0 140 aa8.42□□□□□ -1.06
SHANK2-213ENST00000460048 JMJD7-PLA2G4BH0Y9G9 81 aa8.41□□□□□ -1.06
SHANK2-213ENST00000460048 C8orf87E5RJ46 101 aa8.4□□□□□ -1.06
SHANK2-213ENST00000460048 TRBV20-1A0A075B6N2 111 aa8.39□□□□□ -1.07
SHANK2-213ENST00000460048 LOC110117498A0A087WWA1 95 aa8.39□□□□□ -1.07
SHANK2-213ENST00000460048 J3KT08 172 aa8.39□□□□□ -1.07
SHANK2-213ENST00000460048 TSTD3H0UI37 97 aa8.38□□□□□ -1.07
SHANK2-213ENST00000460048 A0A1B0GW54 56 aa8.37□□□□□ -1.07
SHANK2-213ENST00000460048 LOC105371267A0A1B0GV96 52 aa8.36□□□□□ -1.07
SHANK2-213ENST00000460048 LYRM7Q5U5X0 104 aa8.36□□□□□ -1.07
SHANK2-213ENST00000460048 PDE6GP18545 87 aa8.34□□□□□ -1.07
SHANK2-213ENST00000460048 BATFQ16520 125 aa8.33□□□□□ -1.08
SHANK2-213ENST00000460048 C14orf132Q9NPU4 83 aa8.33□□□□□ -1.08
SHANK2-213ENST00000460048 HRES1P13985 223 aa8.32□□□□□ -1.08
SHANK2-213ENST00000460048 MPLKIPQ8TAP9 179 aa8.32□□□□□ -1.08
SHANK2-213ENST00000460048 NDUFB1O75438 58 aa8.3□□□□□ -1.08
SHANK2-213ENST00000460048 A8MWP4 228 aa8.29□□□□□ -1.08
SHANK2-213ENST00000460048 C9orf118A6NHY6 69 aa8.28□□□□□ -1.08
SHANK2-213ENST00000460048 Q8N9P0 234 aaPredicted RBP8.28□□□□□ -1.08
SHANK2-213ENST00000460048 ZCCHC13Q8WW36 166 aaKnown RBP8.28□□□□□ -1.08
SHANK2-213ENST00000460048 TAX1BP3O14907 124 aa8.27□□□□□ -1.09
SHANK2-213ENST00000460048 C8orf17Q9NRJ1 99 aa8.27□□□□□ -1.09
SHANK2-213ENST00000460048 IGKV3D-7A0A0C4DH55 119 aa8.26□□□□□ -1.09
SHANK2-213ENST00000460048 RBM12B-AS1Q9P1G2 102 aa8.26□□□□□ -1.09
SHANK2-213ENST00000460048 FAM236DA0A1B0GTK5 79 aa8.25□□□□□ -1.09
SHANK2-213ENST00000460048 FAM236CP0DP71 79 aa8.25□□□□□ -1.09
SHANK2-213ENST00000460048 KRTAP9-8Q9BYQ0 159 aa8.25□□□□□ -1.09
SHANK2-213ENST00000460048 A0A1W2PPM0 123 aa8.24□□□□□ -1.09
SHANK2-213ENST00000460048 H3BT86 120 aa8.24□□□□□ -1.09
SHANK2-213ENST00000460048 NREPQ16612 68 aa8.23□□□□□ -1.09
SHANK2-213ENST00000460048 PRR15Q8IV56 129 aa8.21□□□□□ -1.1
SHANK2-213ENST00000460048 MTURNQ8N3F0 131 aa8.2□□□□□ -1.1
SHANK2-213ENST00000460048 SPINK7P58062 85 aa8.19□□□□□ -1.1
SHANK2-213ENST00000460048 Q6ZVQ6 151 aa8.19□□□□□ -1.1
SHANK2-213ENST00000460048 MMP24-AS1A0A0U1RRL7 71 aa8.15□□□□□ -1.1
SHANK2-213ENST00000460048 TMEM254Q8TBM7 123 aa8.14□□□□□ -1.11
SHANK2-213ENST00000460048 MRPL34Q9BQ48 92 aaKnown RBP8.13□□□□□ -1.11
SHANK2-213ENST00000460048 K7EQZ3 153 aa8.12□□□□□ -1.11
SHANK2-213ENST00000460048 MT2AP02795 61 aa8.12□□□□□ -1.11
SHANK2-213ENST00000460048 SPCS1Q9Y6A9 102 aa8.12□□□□□ -1.11
SHANK2-213ENST00000460048 SMCPP49901 116 aaPredicted RBP8.09□□□□□ -1.11
SHANK2-213ENST00000460048 hDV103S1A0JD37 113 aa8.08□□□□□ -1.12
SHANK2-213ENST00000460048 BPY2O14599 106 aa8.07□□□□□ -1.12
SHANK2-213ENST00000460048 WFDC13Q8IUB5 93 aa8.07□□□□□ -1.12
SHANK2-213ENST00000460048 MT1FP04733 61 aa8.05□□□□□ -1.12
SHANK2-213ENST00000460048 COL5A1-AS1Q5SY13 56 aa8.04□□□□□ -1.12
SHANK2-213ENST00000460048 PRO0461Q9UI25 63 aa8.03□□□□□ -1.12
SHANK2-213ENST00000460048 NDUFS5O43920 106 aa8.02□□□□□ -1.13
SHANK2-213ENST00000460048 Q8N9L7 120 aa8□□□□□ -1.13
SHANK2-213ENST00000460048 K7EP34 96 aa7.99□□□□□ -1.13
SHANK2-213ENST00000460048 KRTAP9-3Q9BYQ3 159 aa7.99□□□□□ -1.13
SHANK2-213ENST00000460048 KRTAP10-10P60014 251 aa7.98□□□□□ -1.13
SHANK2-213ENST00000460048 SSPOA2VEC9 5147 aa7.98□□□□□ -1.13
SHANK2-213ENST00000460048 Q5W150 140 aa7.97□□□□□ -1.13
SHANK2-213ENST00000460048 USH2AO75445 5202 aa7.96□□□□□ -1.13
SHANK2-213ENST00000460048 CASC2Q6XLA1 102 aa7.96□□□□□ -1.14
SHANK2-213ENST00000460048 LINC00846Q9NV44 126 aa7.96□□□□□ -1.14
SHANK2-213ENST00000460048 LCE2BO14633 110 aa7.95□□□□□ -1.14
SHANK2-213ENST00000460048 UBL5Q9BZL1 73 aa7.93□□□□□ -1.14
SHANK2-213ENST00000460048 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.92□□□□□ -1.14
SHANK2-213ENST00000460048 HCG22E2RYF7 251 aa7.92□□□□□ -1.14
SHANK2-213ENST00000460048 IGKV2D-30A0A075B6S6 120 aa7.91□□□□□ -1.14
SHANK2-213ENST00000460048 IGKV2-30P06310 120 aa7.91□□□□□ -1.14
SHANK2-213ENST00000460048 H1FX-AS1Q4G0G2 97 aa7.91□□□□□ -1.14
SHANK2-213ENST00000460048 C7orf65Q6ZTY9 151 aa7.91□□□□□ -1.14
SHANK2-213ENST00000460048 KRTAP9-7A8MTY7 169 aa7.89□□□□□ -1.15
SHANK2-213ENST00000460048 CXCL6P80162 114 aa7.87□□□□□ -1.15
SHANK2-213ENST00000460048 GTF2H5Q6ZYL4 71 aa7.87□□□□□ -1.15
SHANK2-213ENST00000460048 PCP4L1A6NKN8 68 aa7.84□□□□□ -1.15
SHANK2-213ENST00000460048 F8W1H4 67 aa7.84□□□□□ -1.15
SHANK2-213ENST00000460048 FCGBPQ9Y6R7 5405 aaPredicted RBP7.82□□□□□ -1.16
SHANK2-213ENST00000460048 ETDBQ3ZM63 59 aa7.8□□□□□ -1.16
SHANK2-213ENST00000460048 C4orf26Q17RF5 130 aa7.79□□□□□ -1.16
SHANK2-213ENST00000460048 KRTAP19-1Q8IUB9 90 aa7.79□□□□□ -1.16
SHANK2-213ENST00000460048 TP53AIP1Q9HCN2 124 aa7.73□□□□□ -1.17
SHANK2-213ENST00000460048 KRTAP3-1Q9BYR8 98 aa7.71□□□□□ -1.18
SHANK2-213ENST00000460048 KRTAP19-6Q3LI70 58 aa7.67□□□□□ -1.18
SHANK2-213ENST00000460048 C1orf64Q8NEQ6 169 aa7.65□□□□□ -1.18
SHANK2-213ENST00000460048 ACYP1P07311 99 aa7.64□□□□□ -1.19
SHANK2-213ENST00000460048 C5orf47Q569G3 176 aa7.62□□□□□ -1.19
SHANK2-213ENST00000460048 S4R3F8 94 aa7.62□□□□□ -1.19
SHANK2-213ENST00000460048 MACF1Q9UPN3 7388 aaKnown RBP7.61□□□□□ -1.19
SHANK2-213ENST00000460048 FAM240AA0A1B0GVK7 77 aa7.6□□□□□ -1.19
SHANK2-213ENST00000460048 SYNE2Q8WXH0 6885 aaKnown RBP7.59□□□□□ -1.19
SHANK2-213ENST00000460048 LCA10Q71F78 164 aa7.58□□□□□ -1.2
SHANK2-213ENST00000460048 CYP4F30PQ9H0H9 118 aa7.58□□□□□ -1.2
SHANK2-213ENST00000460048 TRAV22A0A0B4J277 110 aa7.56□□□□□ -1.2
SHANK2-213ENST00000460048 ATP5EP2Q5VTU8 51 aa7.56□□□□□ -1.2
SHANK2-213ENST00000460048 CSAG1Q6PB30 78 aa7.56□□□□□ -1.2
SHANK2-213ENST00000460048 LOC101927531A0A1B0GV80 90 aa7.52□□□□□ -1.21
SHANK2-213ENST00000460048 FAM236AA0A1B0GUQ0 79 aa7.51□□□□□ -1.21
SHANK2-213ENST00000460048 FAM236BA0A1B0GV22 79 aa7.51□□□□□ -1.21
SHANK2-213ENST00000460048 HIST1H4AP62805 103 aaKnown RBP7.51□□□□□ -1.21
SHANK2-213ENST00000460048 KRTAP3-3Q9BYR6 98 aa7.51□□□□□ -1.21
SHANK2-213ENST00000460048 UQCRQO14949 82 aa7.48□□□□□ -1.21
SHANK2-213ENST00000460048 A0A087WVE0 104 aa7.45□□□□□ -1.22
SHANK2-213ENST00000460048 A0A1B0GV90 55 aa7.45□□□□□ -1.22
SHANK2-213ENST00000460048 LINC00643Q86TS7 51 aa7.45□□□□□ -1.22
SHANK2-213ENST00000460048 H0Y9P7 68 aa7.44□□□□□ -1.22
SHANK2-213ENST00000460048 SPRR2GQ9BYE4 73 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms