RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 DYNC2H1Q8NCM8 4307 aaKnown RBP3.36□□□□□ -1.87
RNU1-88P-201ENST00000459274 A0A087WVE0 104 aa3.36□□□□□ -1.87
RNU1-88P-201ENST00000459274 DSCR10P59022 87 aa3.36□□□□□ -1.87
RNU1-88P-201ENST00000459274 FP248Q71RG6 208 aaPredicted RBP3.36□□□□□ -1.87
RNU1-88P-201ENST00000459274 Q8N9L7 120 aa3.36□□□□□ -1.87
RNU1-88P-201ENST00000459274 TP53AIP1Q9HCN2 124 aa3.36□□□□□ -1.87
RNU1-88P-201ENST00000459274 KMT2AQ03164 3969 aa3.35□□□□□ -1.87
RNU1-88P-201ENST00000459274 KRTAP29-1A8MX34 341 aaPredicted RBP3.35□□□□□ -1.87
RNU1-88P-201ENST00000459274 MP68P56378 58 aa3.35□□□□□ -1.87
RNU1-88P-201ENST00000459274 KRTAP10-8P60410 259 aa3.35□□□□□ -1.87
RNU1-88P-201ENST00000459274 C8orf17Q9NRJ1 99 aa3.35□□□□□ -1.87
RNU1-88P-201ENST00000459274 PRR4Q16378 134 aa3.34□□□□□ -1.87
RNU1-88P-201ENST00000459274 TMEM254Q8TBM7 123 aa3.34□□□□□ -1.87
RNU1-88P-201ENST00000459274 Q96NJ1 140 aa3.34□□□□□ -1.87
RNU1-88P-201ENST00000459274 MRPL34Q9BQ48 92 aaKnown RBP3.34□□□□□ -1.87
RNU1-88P-201ENST00000459274 TRAV7A0A075B6U4 112 aa3.33□□□□□ -1.88
RNU1-88P-201ENST00000459274 UQCRQO14949 82 aa3.33□□□□□ -1.88
RNU1-88P-201ENST00000459274 C5orf47Q569G3 176 aa3.33□□□□□ -1.88
RNU1-88P-201ENST00000459274 SERP2Q8N6R1 65 aa3.33□□□□□ -1.88
RNU1-88P-201ENST00000459274 VPS13DQ5THJ4 4388 aa3.33□□□□□ -1.88
RNU1-88P-201ENST00000459274 IGLV7-46A0A075B6I9 117 aa3.32□□□□□ -1.88
RNU1-88P-201ENST00000459274 PCP4P48539 62 aa3.32□□□□□ -1.88
RNU1-88P-201ENST00000459274 PLECQ15149 4684 aaKnown RBP3.31□□□□□ -1.88
RNU1-88P-201ENST00000459274 RETNLBQ9BQ08 111 aa3.31□□□□□ -1.88
RNU1-88P-201ENST00000459274 MMP24-AS1A0A0U1RRL7 71 aa3.3□□□□□ -1.88
RNU1-88P-201ENST00000459274 COX7CP15954 63 aa3.3□□□□□ -1.88
RNU1-88P-201ENST00000459274 DNAH1Q9P2D7 4330 aa3.3□□□□□ -1.88
RNU1-88P-201ENST00000459274 DNAH6Q9C0G6 4158 aa3.3□□□□□ -1.88
RNU1-88P-201ENST00000459274 TRAV22A0A0B4J277 110 aa3.29□□□□□ -1.88
RNU1-88P-201ENST00000459274 C9orf92A6NGG3 77 aa3.29□□□□□ -1.88
RNU1-88P-201ENST00000459274 H3BPC8 53 aa3.29□□□□□ -1.88
RNU1-88P-201ENST00000459274 ATP11AUNQ6ZP68 121 aa3.29□□□□□ -1.88
RNU1-88P-201ENST00000459274 H0Y9P7 68 aa3.27□□□□□ -1.89
RNU1-88P-201ENST00000459274 NDUFC1O43677 76 aa3.27□□□□□ -1.89
RNU1-88P-201ENST00000459274 SRRM2Q9UQ35 2752 aaKnown RBP3.26□□□□□ -1.89
RNU1-88P-201ENST00000459274 MT1HL1P0DM35 61 aa3.26□□□□□ -1.89
RNU1-88P-201ENST00000459274 C20orf197Q8N268 126 aa3.26□□□□□ -1.89
RNU1-88P-201ENST00000459274 LINC00208Q96KT6 92 aa3.26□□□□□ -1.89
RNU1-88P-201ENST00000459274 OCR1Q9BZK8 76 aa3.26□□□□□ -1.89
RNU1-88P-201ENST00000459274 HYDINQ4G0P3 5121 aa3.26□□□□□ -1.89
RNU1-88P-201ENST00000459274 LOC101927531A0A1B0GV80 90 aa3.25□□□□□ -1.89
RNU1-88P-201ENST00000459274 C1orf64Q8NEQ6 169 aa3.25□□□□□ -1.89
RNU1-88P-201ENST00000459274 FLG2Q5D862 2391 aaPredicted RBP3.25□□□□□ -1.89
RNU1-88P-201ENST00000459274 DMBT1Q9UGM3 2413 aaPredicted RBP3.24□□□□□ -1.89
RNU1-88P-201ENST00000459274 Q8N9P0 234 aaPredicted RBP3.24□□□□□ -1.89
RNU1-88P-201ENST00000459274 DNAH10Q8IVF4 4471 aa3.24□□□□□ -1.89
RNU1-88P-201ENST00000459274 TPRXLQ17RH7 258 aa3.23□□□□□ -1.89
RNU1-88P-201ENST00000459274 Q75L30 129 aa3.23□□□□□ -1.89
RNU1-88P-201ENST00000459274 NOTCH2NLQ7Z3S9 236 aa3.23□□□□□ -1.89
RNU1-88P-201ENST00000459274 FRAS1Q86XX4 4008 aa3.22□□□□□ -1.89
RNU1-88P-201ENST00000459274 ZCCHC13Q8WW36 166 aaKnown RBP3.22□□□□□ -1.89
RNU1-88P-201ENST00000459274 DNAH17Q9UFH2 4485 aa3.21□□□□□ -1.9
RNU1-88P-201ENST00000459274 SEC61BP60468 96 aaKnown RBP3.21□□□□□ -1.9
RNU1-88P-201ENST00000459274 KLKP1Q107X0 134 aa3.21□□□□□ -1.9
RNU1-88P-201ENST00000459274 C20orf166-AS1Q96NR2 134 aa3.21□□□□□ -1.9
RNU1-88P-201ENST00000459274 SNURFQ9Y675 71 aa3.21□□□□□ -1.9
RNU1-88P-201ENST00000459274 PKD1P98161 4303 aa3.21□□□□□ -1.9
RNU1-88P-201ENST00000459274 IGKV2D-30A0A075B6S6 120 aa3.2□□□□□ -1.9
RNU1-88P-201ENST00000459274 A8MUU9 505 aa3.2□□□□□ -1.9
RNU1-88P-201ENST00000459274 CCDC179H3BU77 68 aa3.2□□□□□ -1.9
RNU1-88P-201ENST00000459274 IGKV2-30P06310 120 aa3.2□□□□□ -1.9
RNU1-88P-201ENST00000459274 ATP5EP56381 51 aaPredicted RBP3.2□□□□□ -1.9
RNU1-88P-201ENST00000459274 KRTAP13-3Q3SY46 172 aa3.2□□□□□ -1.9
RNU1-88P-201ENST00000459274 C7orf65Q6ZTY9 151 aa3.2□□□□□ -1.9
RNU1-88P-201ENST00000459274 A0A0U1RQV1 116 aa3.19□□□□□ -1.9
RNU1-88P-201ENST00000459274 KRTAP16-1A8MUX0 517 aa3.19□□□□□ -1.9
RNU1-88P-201ENST00000459274 RPL37P61927 97 aaKnown RBP3.19□□□□□ -1.9
RNU1-88P-201ENST00000459274 HECTD4Q9Y4D8 3996 aa3.19□□□□□ -1.9
RNU1-88P-201ENST00000459274 TMEM258P61165 79 aa3.18□□□□□ -1.9
RNU1-88P-201ENST00000459274 PCOTHQ58A44 107 aa3.17□□□□□ -1.9
RNU1-88P-201ENST00000459274 Q5W150 140 aa3.17□□□□□ -1.9
RNU1-88P-201ENST00000459274 RYR2Q92736 4967 aa3.17□□□□□ -1.9
RNU1-88P-201ENST00000459274 CYP4F30PQ9H0H9 118 aa3.16□□□□□ -1.9
RNU1-88P-201ENST00000459274 DNAH2Q9P225 4427 aa3.16□□□□□ -1.9
RNU1-88P-201ENST00000459274 FAT2Q9NYQ8 4349 aa3.15□□□□□ -1.9
RNU1-88P-201ENST00000459274 SPINK7P58062 85 aa3.15□□□□□ -1.91
RNU1-88P-201ENST00000459274 RBM12B-AS1Q9P1G2 102 aa3.15□□□□□ -1.91
RNU1-88P-201ENST00000459274 KMT2CQ8NEZ4 4911 aaKnown RBP3.14□□□□□ -1.91
RNU1-88P-201ENST00000459274 FAM236DA0A1B0GTK5 79 aa3.14□□□□□ -1.91
RNU1-88P-201ENST00000459274 FAM236CP0DP71 79 aa3.14□□□□□ -1.91
RNU1-88P-201ENST00000459274 ACYP2P14621 99 aa3.14□□□□□ -1.91
RNU1-88P-201ENST00000459274 KRTAP5-9P26371 169 aa3.14□□□□□ -1.91
RNU1-88P-201ENST00000459274 SPANXA2-OT1Q8N9U9 137 aa3.14□□□□□ -1.91
RNU1-88P-201ENST00000459274 CHKB-CPT1BH3BT56 60 aa3.13□□□□□ -1.91
RNU1-88P-201ENST00000459274 H7BZZ5 65 aa3.13□□□□□ -1.91
RNU1-88P-201ENST00000459274 SPTSSBQ8NFR3 76 aa3.13□□□□□ -1.91
RNU1-88P-201ENST00000459274 SVIPQ8NHG7 77 aa3.13□□□□□ -1.91
RNU1-88P-201ENST00000459274 A8MUN3 132 aa3.12□□□□□ -1.91
RNU1-88P-201ENST00000459274 PKHD1P08F94 4074 aa3.12□□□□□ -1.91
RNU1-88P-201ENST00000459274 SACSQ9NZJ4 4579 aa3.12□□□□□ -1.91
RNU1-88P-201ENST00000459274 HRES1P13985 223 aa3.11□□□□□ -1.91
RNU1-88P-201ENST00000459274 VPS13BQ7Z7G8 4022 aa3.08□□□□□ -1.92
RNU1-88P-201ENST00000459274 C4orf26Q17RF5 130 aa3.08□□□□□ -1.92
RNU1-88P-201ENST00000459274 SERP1Q9Y6X1 66 aa3.08□□□□□ -1.92
RNU1-88P-201ENST00000459274 DNAH11Q96DT5 4516 aa3.08□□□□□ -1.92
RNU1-88P-201ENST00000459274 COX6B2Q6YFQ2 88 aa3.07□□□□□ -1.92
RNU1-88P-201ENST00000459274 DNAH5Q8TE73 4624 aa3.07□□□□□ -1.92
RNU1-88P-201ENST00000459274 LRP1BQ9NZR2 4599 aa3.05□□□□□ -1.92
RNU1-88P-201ENST00000459274 SEC61GP60059 68 aa3.05□□□□□ -1.92
RNU1-88P-201ENST00000459274 RPS28P62857 69 aaKnown RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms