RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 C8orf87E5RJ46 101 aa12.16□□□□□ -0.46
CBX3-204ENST00000456948 NDUFB1O75438 58 aa12.15□□□□□ -0.46
CBX3-204ENST00000456948 H3BT86 120 aa12.14□□□□□ -0.47
CBX3-204ENST00000456948 C14orf132Q9NPU4 83 aa12.14□□□□□ -0.47
CBX3-204ENST00000456948 A0A1B0GVX0 72 aa12.13□□□□□ -0.47
CBX3-204ENST00000456948 LCE2CQ5TA81 110 aa12.13□□□□□ -0.47
CBX3-204ENST00000456948 KRTAP19-2Q3LHN2 52 aa12.11□□□□□ -0.47
CBX3-204ENST00000456948 KRTAP16-1A8MUX0 517 aa12.07□□□□□ -0.48
CBX3-204ENST00000456948 NREPQ16612 68 aa12.06□□□□□ -0.48
CBX3-204ENST00000456948 NOTCH2NLQ7Z3S9 236 aa12.06□□□□□ -0.48
CBX3-204ENST00000456948 COL5A1-AS1Q5SY13 56 aa12.05□□□□□ -0.48
CBX3-204ENST00000456948 SPCS1Q9Y6A9 102 aa12.05□□□□□ -0.48
CBX3-204ENST00000456948 MT1HP80294 61 aa12.03□□□□□ -0.48
CBX3-204ENST00000456948 A8MWP4 228 aa12.01□□□□□ -0.49
CBX3-204ENST00000456948 M0R2T5 61 aa12□□□□□ -0.49
CBX3-204ENST00000456948 MTURNQ8N3F0 131 aa12□□□□□ -0.49
CBX3-204ENST00000456948 KRTAP9-6A0A140TA67 174 aa11.94□□□□□ -0.5
CBX3-204ENST00000456948 C8orf17Q9NRJ1 99 aa11.92□□□□□ -0.5
CBX3-204ENST00000456948 IGKV3D-7A0A0C4DH55 119 aa11.9□□□□□ -0.5
CBX3-204ENST00000456948 LCE2DQ5TA82 110 aaPredicted RBP11.9□□□□□ -0.5
CBX3-204ENST00000456948 PRR15Q8IV56 129 aa11.9□□□□□ -0.5
CBX3-204ENST00000456948 ZCCHC13Q8WW36 166 aaKnown RBP11.87□□□□□ -0.51
CBX3-204ENST00000456948 Q8N9P0 234 aaPredicted RBP11.86□□□□□ -0.51
CBX3-204ENST00000456948 RBM12B-AS1Q9P1G2 102 aa11.86□□□□□ -0.51
CBX3-204ENST00000456948 K7EP34 96 aa11.85□□□□□ -0.51
CBX3-204ENST00000456948 Q6ZVQ6 151 aa11.85□□□□□ -0.51
CBX3-204ENST00000456948 BPY2O14599 106 aa11.84□□□□□ -0.51
CBX3-204ENST00000456948 FAM236DA0A1B0GTK5 79 aa11.83□□□□□ -0.52
CBX3-204ENST00000456948 FAM236CP0DP71 79 aa11.83□□□□□ -0.52
CBX3-204ENST00000456948 GTF2H5Q6ZYL4 71 aa11.83□□□□□ -0.52
CBX3-204ENST00000456948 FLGP20930 4061 aaPredicted RBP11.82□□□□□ -0.52
CBX3-204ENST00000456948 PCP4L1A6NKN8 68 aa11.82□□□□□ -0.52
CBX3-204ENST00000456948 SMCPP49901 116 aaPredicted RBP11.8□□□□□ -0.52
CBX3-204ENST00000456948 KRTAP10-6P60371 365 aaPredicted RBP11.79□□□□□ -0.52
CBX3-204ENST00000456948 TMEM254Q8TBM7 123 aa11.78□□□□□ -0.52
CBX3-204ENST00000456948 MRPL34Q9BQ48 92 aaKnown RBP11.76□□□□□ -0.53
CBX3-204ENST00000456948 hDV103S1A0JD37 113 aa11.75□□□□□ -0.53
CBX3-204ENST00000456948 LORP23490 312 aaPredicted RBP11.75□□□□□ -0.53
CBX3-204ENST00000456948 PRO0461Q9UI25 63 aa11.75□□□□□ -0.53
CBX3-204ENST00000456948 K7EQZ3 153 aa11.74□□□□□ -0.53
CBX3-204ENST00000456948 MMP24-AS1A0A0U1RRL7 71 aa11.73□□□□□ -0.53
CBX3-204ENST00000456948 SPINK7P58062 85 aa11.73□□□□□ -0.53
CBX3-204ENST00000456948 UBL5Q9BZL1 73 aa11.73□□□□□ -0.53
CBX3-204ENST00000456948 HRES1P13985 223 aa11.72□□□□□ -0.53
CBX3-204ENST00000456948 F8W1H4 67 aa11.71□□□□□ -0.53
CBX3-204ENST00000456948 NDUFS5O43920 106 aa11.71□□□□□ -0.53
CBX3-204ENST00000456948 MPLKIPQ8TAP9 179 aa11.68□□□□□ -0.54
CBX3-204ENST00000456948 FSIP2Q5CZC0 6907 aa11.66□□□□□ -0.54
CBX3-204ENST00000456948 CRCT1Q9UGL9 99 aa11.65□□□□□ -0.54
CBX3-204ENST00000456948 LINC00846Q9NV44 126 aa11.63□□□□□ -0.55
CBX3-204ENST00000456948 CASC2Q6XLA1 102 aa11.61□□□□□ -0.55
CBX3-204ENST00000456948 WFDC13Q8IUB5 93 aa11.59□□□□□ -0.55
CBX3-204ENST00000456948 Q8N9L7 120 aa11.58□□□□□ -0.56
CBX3-204ENST00000456948 ETDBQ3ZM63 59 aa11.56□□□□□ -0.56
CBX3-204ENST00000456948 HCG22E2RYF7 251 aa11.51□□□□□ -0.57
CBX3-204ENST00000456948 CXCL6P80162 114 aa11.49□□□□□ -0.57
CBX3-204ENST00000456948 C7orf65Q6ZTY9 151 aa11.45□□□□□ -0.58
CBX3-204ENST00000456948 IGKV2D-30A0A075B6S6 120 aa11.44□□□□□ -0.58
CBX3-204ENST00000456948 IGKV2-30P06310 120 aa11.44□□□□□ -0.58
CBX3-204ENST00000456948 ACYP1P07311 99 aa11.41□□□□□ -0.58
CBX3-204ENST00000456948 Q5W150 140 aa11.41□□□□□ -0.58
CBX3-204ENST00000456948 KRTAP9-8Q9BYQ0 159 aa11.39□□□□□ -0.59
CBX3-204ENST00000456948 TP53AIP1Q9HCN2 124 aa11.35□□□□□ -0.59
CBX3-204ENST00000456948 H1FX-AS1Q4G0G2 97 aa11.32□□□□□ -0.6
CBX3-204ENST00000456948 FAM240AA0A1B0GVK7 77 aa11.31□□□□□ -0.6
CBX3-204ENST00000456948 ATP5EP2Q5VTU8 51 aa11.26□□□□□ -0.61
CBX3-204ENST00000456948 MT2AP02795 61 aa11.25□□□□□ -0.61
CBX3-204ENST00000456948 KRTAP10-10P60014 251 aa11.24□□□□□ -0.61
CBX3-204ENST00000456948 C4orf26Q17RF5 130 aa11.19□□□□□ -0.62
CBX3-204ENST00000456948 HIST1H4AP62805 103 aaKnown RBP11.16□□□□□ -0.62
CBX3-204ENST00000456948 MT1FP04733 61 aa11.15□□□□□ -0.62
CBX3-204ENST00000456948 A0A1B0GV90 55 aa11.13□□□□□ -0.63
CBX3-204ENST00000456948 LINC00643Q86TS7 51 aa11.1□□□□□ -0.63
CBX3-204ENST00000456948 USH2AO75445 5202 aa11.07□□□□□ -0.64
CBX3-204ENST00000456948 TRAV22A0A0B4J277 110 aa11.05□□□□□ -0.64
CBX3-204ENST00000456948 C1orf64Q8NEQ6 169 aa11.05□□□□□ -0.64
CBX3-204ENST00000456948 KRTAP9-3Q9BYQ3 159 aa11.04□□□□□ -0.64
CBX3-204ENST00000456948 J3QR89 54 aa11.03□□□□□ -0.64
CBX3-204ENST00000456948 LOC101927531A0A1B0GV80 90 aa11.01□□□□□ -0.65
CBX3-204ENST00000456948 UQCRQO14949 82 aa11.01□□□□□ -0.65
CBX3-204ENST00000456948 CYP4F30PQ9H0H9 118 aa11□□□□□ -0.65
CBX3-204ENST00000456948 ATOX1O00244 68 aa10.98□□□□□ -0.65
CBX3-204ENST00000456948 S4R3F8 94 aa10.97□□□□□ -0.65
CBX3-204ENST00000456948 LCE2BO14633 110 aa10.95□□□□□ -0.66
CBX3-204ENST00000456948 SSPOA2VEC9 5147 aa10.94□□□□□ -0.66
CBX3-204ENST00000456948 KRTAP3-1Q9BYR8 98 aa10.93□□□□□ -0.66
CBX3-204ENST00000456948 C5orf47Q569G3 176 aa10.91□□□□□ -0.66
CBX3-204ENST00000456948 CSAG1Q6PB30 78 aa10.91□□□□□ -0.66
CBX3-204ENST00000456948 A0A087WVE0 104 aa10.9□□□□□ -0.66
CBX3-204ENST00000456948 H0Y9P7 68 aa10.9□□□□□ -0.66
CBX3-204ENST00000456948 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.84□□□□□ -0.67
CBX3-204ENST00000456948 KRTAP3-3Q9BYR6 98 aa10.84□□□□□ -0.67
CBX3-204ENST00000456948 KRTAP3-2Q9BYR7 98 aa10.84□□□□□ -0.67
CBX3-204ENST00000456948 LCA10Q71F78 164 aa10.83□□□□□ -0.68
CBX3-204ENST00000456948 KRTAP19-1Q8IUB9 90 aa10.82□□□□□ -0.68
CBX3-204ENST00000456948 MP68P56378 58 aa10.81□□□□□ -0.68
CBX3-204ENST00000456948 FAM236AA0A1B0GUQ0 79 aa10.8□□□□□ -0.68
CBX3-204ENST00000456948 FAM236BA0A1B0GV22 79 aa10.8□□□□□ -0.68
CBX3-204ENST00000456948 FCGBPQ9Y6R7 5405 aaPredicted RBP10.76□□□□□ -0.69
CBX3-204ENST00000456948 LINC00208Q96KT6 92 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms