RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 LRP1BQ9NZR2 4599 aa7.45□□□□□ -1.22
LINC00959-201ENST00000456581 MOBPQ13875 183 aa7.45□□□□□ -1.22
LINC00959-201ENST00000456581 Q8N9P0 234 aaPredicted RBP7.44□□□□□ -1.22
LINC00959-201ENST00000456581 IGHV6-1A0A0B4J1U7 121 aa7.44□□□□□ -1.22
LINC00959-201ENST00000456581 PRR15LQ9BU68 103 aa7.44□□□□□ -1.22
LINC00959-201ENST00000456581 PLAC8Q9NZF1 115 aa7.44□□□□□ -1.22
LINC00959-201ENST00000456581 CHKB-CPT1BH3BT56 60 aa7.43□□□□□ -1.22
LINC00959-201ENST00000456581 PKHD1P08F94 4074 aa7.43□□□□□ -1.22
LINC00959-201ENST00000456581 ALMS1Q8TCU4 4167 aa7.43□□□□□ -1.22
LINC00959-201ENST00000456581 NDUFS5O43920 106 aa7.42□□□□□ -1.22
LINC00959-201ENST00000456581 SACSQ9NZJ4 4579 aa7.42□□□□□ -1.22
LINC00959-201ENST00000456581 SPTSSBQ8NFR3 76 aa7.42□□□□□ -1.22
LINC00959-201ENST00000456581 CD164Q04900 197 aa7.41□□□□□ -1.22
LINC00959-201ENST00000456581 CIRBP-AS1Q8TBR5 109 aa7.39□□□□□ -1.23
LINC00959-201ENST00000456581 COA5Q86WW8 74 aa7.39□□□□□ -1.23
LINC00959-201ENST00000456581 ZNF861PO60384 105 aa7.37□□□□□ -1.23
LINC00959-201ENST00000456581 KRTAP10-1P60331 282 aa7.37□□□□□ -1.23
LINC00959-201ENST00000456581 SPINK6Q6UWN8 80 aa7.37□□□□□ -1.23
LINC00959-201ENST00000456581 LCA10Q71F78 164 aa7.37□□□□□ -1.23
LINC00959-201ENST00000456581 SPANXA2-OT1Q8N9U9 137 aa7.37□□□□□ -1.23
LINC00959-201ENST00000456581 C8orf17Q9NRJ1 99 aa7.37□□□□□ -1.23
LINC00959-201ENST00000456581 SPAG11AQ6PDA7 123 aa7.36□□□□□ -1.23
LINC00959-201ENST00000456581 VPS13BQ7Z7G8 4022 aa7.35□□□□□ -1.23
LINC00959-201ENST00000456581 LINC00483Q53H64 154 aa7.34□□□□□ -1.23
LINC00959-201ENST00000456581 ZNF706Q9Y5V0 76 aaPredicted RBP7.34□□□□□ -1.23
LINC00959-201ENST00000456581 A6NED7 52 aa7.33□□□□□ -1.24
LINC00959-201ENST00000456581 H3BPC8 53 aa7.33□□□□□ -1.24
LINC00959-201ENST00000456581 IGLV7-46A0A075B6I9 117 aa7.32□□□□□ -1.24
LINC00959-201ENST00000456581 IGLV7-43P04211 117 aa7.32□□□□□ -1.24
LINC00959-201ENST00000456581 A0A1B0GVX0 72 aa7.32□□□□□ -1.24
LINC00959-201ENST00000456581 LIMD2Q9BT23 127 aa7.32□□□□□ -1.24
LINC00959-201ENST00000456581 ASB16-AS1Q495Z4 193 aa7.31□□□□□ -1.24
LINC00959-201ENST00000456581 KMT2CQ8NEZ4 4911 aaKnown RBP7.3□□□□□ -1.24
LINC00959-201ENST00000456581 Q5W150 140 aa7.3□□□□□ -1.24
LINC00959-201ENST00000456581 HRES1P13985 223 aa7.28□□□□□ -1.24
LINC00959-201ENST00000456581 CDK2AP2O75956 126 aa7.28□□□□□ -1.24
LINC00959-201ENST00000456581 KTN1-AS1Q86SY8 53 aa7.28□□□□□ -1.24
LINC00959-201ENST00000456581 PRR26Q8N8Z3 221 aa7.28□□□□□ -1.24
LINC00959-201ENST00000456581 RETNLBQ9BQ08 111 aa7.28□□□□□ -1.24
LINC00959-201ENST00000456581 MRPL34Q9BQ48 92 aaKnown RBP7.27□□□□□ -1.25
LINC00959-201ENST00000456581 SPINK7P58062 85 aa7.27□□□□□ -1.25
LINC00959-201ENST00000456581 Q6ZSA8 131 aa7.27□□□□□ -1.25
LINC00959-201ENST00000456581 DYNC1H1Q14204 4646 aaKnown RBP7.26□□□□□ -1.25
LINC00959-201ENST00000456581 Q75L30 129 aa7.25□□□□□ -1.25
LINC00959-201ENST00000456581 TP53AIP1Q9HCN2 124 aa7.25□□□□□ -1.25
LINC00959-201ENST00000456581 ATP11AUNQ6ZP68 121 aa7.24□□□□□ -1.25
LINC00959-201ENST00000456581 LOC101927531A0A1B0GV80 90 aa7.24□□□□□ -1.25
LINC00959-201ENST00000456581 FAT1Q14517 4588 aa7.23□□□□□ -1.25
LINC00959-201ENST00000456581 RBM12B-AS1Q9P1G2 102 aa7.22□□□□□ -1.25
LINC00959-201ENST00000456581 A6NN06 94 aa7.2□□□□□ -1.26
LINC00959-201ENST00000456581 RYR2Q92736 4967 aa7.2□□□□□ -1.26
LINC00959-201ENST00000456581 KRTAP13-2Q52LG2 175 aa7.17□□□□□ -1.26
LINC00959-201ENST00000456581 CDC42SE1Q9NRR8 79 aa7.17□□□□□ -1.26
LINC00959-201ENST00000456581 SMR3BP02814 79 aaPredicted RBP7.16□□□□□ -1.26
LINC00959-201ENST00000456581 KRTAP13-3Q3SY46 172 aa7.15□□□□□ -1.26
LINC00959-201ENST00000456581 LINC01558Q9Y6Z2 57 aa7.15□□□□□ -1.26
LINC00959-201ENST00000456581 SSBP3-AS1Q7Z2R9 100 aa7.14□□□□□ -1.27
LINC00959-201ENST00000456581 APOBP04114 4563 aaKnown RBP7.13□□□□□ -1.27
LINC00959-201ENST00000456581 KRTAP1-4P0C5Y4 121 aa7.13□□□□□ -1.27
LINC00959-201ENST00000456581 C7orf65Q6ZTY9 151 aa7.09□□□□□ -1.27
LINC00959-201ENST00000456581 ADM2Q7Z4H4 148 aa7.08□□□□□ -1.28
LINC00959-201ENST00000456581 PLA2G1BP04054 148 aaKnown RBP7.08□□□□□ -1.28
LINC00959-201ENST00000456581 A0A1B0GVY2 172 aa7.07□□□□□ -1.28
LINC00959-201ENST00000456581 RYR3Q15413 4870 aa7.07□□□□□ -1.28
LINC00959-201ENST00000456581 PRAC1Q96KF2 57 aa7.06□□□□□ -1.28
LINC00959-201ENST00000456581 LINC00313P59037 77 aa7.06□□□□□ -1.28
LINC00959-201ENST00000456581 IGKV2D-30A0A075B6S6 120 aa7.01□□□□□ -1.29
LINC00959-201ENST00000456581 IGKV2-30P06310 120 aa7.01□□□□□ -1.29
LINC00959-201ENST00000456581 ACYP2P14621 99 aa7.01□□□□□ -1.29
LINC00959-201ENST00000456581 TYMSOSQ8TAI1 123 aa7.01□□□□□ -1.29
LINC00959-201ENST00000456581 C4orf48Q5BLP8 95 aa7□□□□□ -1.29
LINC00959-201ENST00000456581 DMAC1Q96GE9 116 aa6.99□□□□□ -1.29
LINC00959-201ENST00000456581 FLG2Q5D862 2391 aaPredicted RBP6.98□□□□□ -1.29
LINC00959-201ENST00000456581 KRTAP16-1A8MUX0 517 aa6.97□□□□□ -1.29
LINC00959-201ENST00000456581 C8orf87E5RJ46 101 aa6.97□□□□□ -1.29
LINC00959-201ENST00000456581 LRP1Q07954 4544 aaKnown RBP6.97□□□□□ -1.29
LINC00959-201ENST00000456581 FAM229AH3BQW9 127 aa6.96□□□□□ -1.3
LINC00959-201ENST00000456581 KRTAP10-4P60372 401 aaPredicted RBP6.96□□□□□ -1.3
LINC00959-201ENST00000456581 A0A1B0GU69 56 aa6.93□□□□□ -1.3
LINC00959-201ENST00000456581 SPINK1P00995 79 aa6.92□□□□□ -1.3
LINC00959-201ENST00000456581 HSPG2P98160 4391 aa6.91□□□□□ -1.3
LINC00959-201ENST00000456581 PKHD1L1Q86WI1 4243 aa6.91□□□□□ -1.3
LINC00959-201ENST00000456581 DMBT1Q9UGM3 2413 aaPredicted RBP6.91□□□□□ -1.3
LINC00959-201ENST00000456581 Q8N1X5 172 aa6.9□□□□□ -1.3
LINC00959-201ENST00000456581 LINC00304Q8N9R0 145 aa6.9□□□□□ -1.3
LINC00959-201ENST00000456581 KIAA1109Q2LD37 5005 aa6.9□□□□□ -1.31
LINC00959-201ENST00000456581 BIRC6Q9NR09 4857 aa6.85□□□□□ -1.31
LINC00959-201ENST00000456581 KRTAP17-1Q9BYP8 105 aa6.85□□□□□ -1.31
LINC00959-201ENST00000456581 RYR1P21817 5038 aa6.84□□□□□ -1.31
LINC00959-201ENST00000456581 MYCBP2O75592 4640 aa6.84□□□□□ -1.31
LINC00959-201ENST00000456581 EPPK1P58107 5090 aaKnown RBP6.83□□□□□ -1.32
LINC00959-201ENST00000456581 MIR22HGQ0VDD5 57 aa6.82□□□□□ -1.32
LINC00959-201ENST00000456581 C9orf92A6NGG3 77 aa6.8□□□□□ -1.32
LINC00959-201ENST00000456581 SPATA8Q6RVD6 105 aa6.8□□□□□ -1.32
LINC00959-201ENST00000456581 LINC01554Q52M75 96 aa6.79□□□□□ -1.32
LINC00959-201ENST00000456581 TNXBP22105 4242 aa6.79□□□□□ -1.32
LINC00959-201ENST00000456581 UQCR11O14957 56 aa6.77□□□□□ -1.33
LINC00959-201ENST00000456581 Q5VSD8 79 aa6.77□□□□□ -1.33
LINC00959-201ENST00000456581 RPS29P62273 56 aaKnown RBP6.76□□□□□ -1.33
LINC00959-201ENST00000456581 FAT3Q8TDW7 4589 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms