RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 HIST1H2BLQ99880 126 aa10.66□□□□□ -0.7
PTPRA-208ENST00000455631 TRIAP1O43715 76 aa10.64□□□□□ -0.71
PTPRA-208ENST00000455631 S100A2P29034 98 aa10.64□□□□□ -0.71
PTPRA-208ENST00000455631 H3BQ85 93 aa10.63□□□□□ -0.71
PTPRA-208ENST00000455631 J3KT08 172 aa10.63□□□□□ -0.71
PTPRA-208ENST00000455631 KRTAP5-9P26371 169 aa10.63□□□□□ -0.71
PTPRA-208ENST00000455631 TMEM256-PLSCR3K7ERE1 68 aa10.62□□□□□ -0.71
PTPRA-208ENST00000455631 HIST3H2BBQ8N257 126 aa10.62□□□□□ -0.71
PTPRA-208ENST00000455631 PRO1854Q9UHT4 67 aa10.62□□□□□ -0.71
PTPRA-208ENST00000455631 DSCR8Q96T75 97 aa10.61□□□□□ -0.71
PTPRA-208ENST00000455631 DLEU1O43261 78 aa10.6□□□□□ -0.71
PTPRA-208ENST00000455631 MT1BP07438 61 aa10.59□□□□□ -0.71
PTPRA-208ENST00000455631 IGKV3D-7A0A0C4DH55 119 aa10.58□□□□□ -0.72
PTPRA-208ENST00000455631 NDUFB1O75438 58 aa10.58□□□□□ -0.72
PTPRA-208ENST00000455631 MDN1Q9NU22 5596 aa10.58□□□□□ -0.72
PTPRA-208ENST00000455631 KMT2DO14686 5537 aa10.56□□□□□ -0.72
PTPRA-208ENST00000455631 Q5VV11 94 aa10.56□□□□□ -0.72
PTPRA-208ENST00000455631 C8orf17Q9NRJ1 99 aa10.56□□□□□ -0.72
PTPRA-208ENST00000455631 HIGD1BQ9P298 99 aa10.55□□□□□ -0.72
PTPRA-208ENST00000455631 C14orf144Q96I85 54 aa10.54□□□□□ -0.72
PTPRA-208ENST00000455631 TMEM238LA0A1B0GVL6 79 aa10.52□□□□□ -0.73
PTPRA-208ENST00000455631 A6NJY4 79 aa10.52□□□□□ -0.73
PTPRA-208ENST00000455631 UBE2V1Q13404 147 aa10.52□□□□□ -0.73
PTPRA-208ENST00000455631 CEND1Q8N111 149 aa10.52□□□□□ -0.73
PTPRA-208ENST00000455631 KRTAP10-5P60370 271 aa10.5□□□□□ -0.73
PTPRA-208ENST00000455631 FAM236AA0A1B0GUQ0 79 aa10.49□□□□□ -0.73
PTPRA-208ENST00000455631 FAM236BA0A1B0GV22 79 aa10.49□□□□□ -0.73
PTPRA-208ENST00000455631 KRTAP2-3P0C7H8 128 aa10.49□□□□□ -0.73
PTPRA-208ENST00000455631 KRTAP2-4Q9BYR9 128 aa10.49□□□□□ -0.73
PTPRA-208ENST00000455631 PSMB2P49721 201 aa10.48□□□□□ -0.73
PTPRA-208ENST00000455631 RBM3P98179 157 aaKnown RBP10.48□□□□□ -0.73
PTPRA-208ENST00000455631 C2orf91Q6ZV80 131 aa10.48□□□□□ -0.73
PTPRA-208ENST00000455631 Q6ZVQ6 151 aa10.48□□□□□ -0.73
PTPRA-208ENST00000455631 FXYD2P54710 66 aa10.45□□□□□ -0.74
PTPRA-208ENST00000455631 C21orf62-AS1Q17RA5 79 aa10.45□□□□□ -0.74
PTPRA-208ENST00000455631 Q6ZQT0 140 aa10.45□□□□□ -0.74
PTPRA-208ENST00000455631 KRTAP19-8Q3LI54 63 aa10.43□□□□□ -0.74
PTPRA-208ENST00000455631 PAM16Q9Y3D7 125 aa10.41□□□□□ -0.74
PTPRA-208ENST00000455631 COX6CP09669 75 aa10.4□□□□□ -0.74
PTPRA-208ENST00000455631 C9JAW5 83 aa10.38□□□□□ -0.75
PTPRA-208ENST00000455631 SPATA45Q537H7 98 aa10.38□□□□□ -0.75
PTPRA-208ENST00000455631 IGKV2D-30A0A075B6S6 120 aa10.37□□□□□ -0.75
PTPRA-208ENST00000455631 IGKV2-30P06310 120 aa10.37□□□□□ -0.75
PTPRA-208ENST00000455631 SPRR2GQ9BYE4 73 aa10.37□□□□□ -0.75
PTPRA-208ENST00000455631 C5orf47Q569G3 176 aa10.36□□□□□ -0.75
PTPRA-208ENST00000455631 K7ERJ3 54 aa10.35□□□□□ -0.75
PTPRA-208ENST00000455631 S100A6P06703 90 aa10.35□□□□□ -0.75
PTPRA-208ENST00000455631 MRPL34Q9BQ48 92 aaKnown RBP10.34□□□□□ -0.75
PTPRA-208ENST00000455631 TMEM254Q8TBM7 123 aa10.32□□□□□ -0.76
PTPRA-208ENST00000455631 NDUFS5O43920 106 aa10.31□□□□□ -0.76
PTPRA-208ENST00000455631 C7orf65Q6ZTY9 151 aa10.31□□□□□ -0.76
PTPRA-208ENST00000455631 PRR15Q8IV56 129 aa10.3□□□□□ -0.76
PTPRA-208ENST00000455631 MMP24-AS1A0A0U1RRL7 71 aa10.29□□□□□ -0.76
PTPRA-208ENST00000455631 VAMP8Q9BV40 100 aa10.27□□□□□ -0.77
PTPRA-208ENST00000455631 C4orf26Q17RF5 130 aa10.25□□□□□ -0.77
PTPRA-208ENST00000455631 IMUPQ9GZP8 106 aa10.25□□□□□ -0.77
PTPRA-208ENST00000455631 SPRR2EP22531 72 aa10.23□□□□□ -0.77
PTPRA-208ENST00000455631 SPRR2BP35325 72 aa10.23□□□□□ -0.77
PTPRA-208ENST00000455631 SPRR2AP35326 72 aa10.23□□□□□ -0.77
PTPRA-208ENST00000455631 hDV103S1A0JD37 113 aa10.21□□□□□ -0.77
PTPRA-208ENST00000455631 BAALC-AS2P0C853 105 aa10.21□□□□□ -0.77
PTPRA-208ENST00000455631 SPRR2FQ96RM1 72 aa10.2□□□□□ -0.78
PTPRA-208ENST00000455631 SCGB1C2P0DMR2 95 aa10.19□□□□□ -0.78
PTPRA-208ENST00000455631 A0A1B0GW54 56 aa10.18□□□□□ -0.78
PTPRA-208ENST00000455631 HSD52Q0P140 79 aa10.18□□□□□ -0.78
PTPRA-208ENST00000455631 Q5W150 140 aa10.18□□□□□ -0.78
PTPRA-208ENST00000455631 S100A1P23297 94 aa10.17□□□□□ -0.78
PTPRA-208ENST00000455631 S4R3F8 94 aa10.16□□□□□ -0.78
PTPRA-208ENST00000455631 CSAG1Q6PB30 78 aa10.15□□□□□ -0.78
PTPRA-208ENST00000455631 LOC110117498A0A087WWA1 95 aa10.13□□□□□ -0.79
PTPRA-208ENST00000455631 KLKP1Q107X0 134 aa10.13□□□□□ -0.79
PTPRA-208ENST00000455631 NREPQ16612 68 aa10.12□□□□□ -0.79
PTPRA-208ENST00000455631 KRTAP2-2Q9BYT5 123 aa10.12□□□□□ -0.79
PTPRA-208ENST00000455631 KRTAP2-1Q9BYU5 128 aa10.12□□□□□ -0.79
PTPRA-208ENST00000455631 K7EQZ3 153 aa10.11□□□□□ -0.79
PTPRA-208ENST00000455631 JMJD7-PLA2G4BH0Y9G9 81 aa10.1□□□□□ -0.79
PTPRA-208ENST00000455631 LCA10Q71F78 164 aa10.07□□□□□ -0.8
PTPRA-208ENST00000455631 PDE6GP18545 87 aa10.06□□□□□ -0.8
PTPRA-208ENST00000455631 C14orf132Q9NPU4 83 aa10.05□□□□□ -0.8
PTPRA-208ENST00000455631 SMCPP49901 116 aaPredicted RBP10.04□□□□□ -0.8
PTPRA-208ENST00000455631 KRTAP3-1Q9BYR8 98 aa10.04□□□□□ -0.8
PTPRA-208ENST00000455631 HCG22E2RYF7 251 aa9.97□□□□□ -0.81
PTPRA-208ENST00000455631 ATXN8Q156A1 80 aa9.96□□□□□ -0.82
PTPRA-208ENST00000455631 LCE1AQ5T7P2 110 aa9.96□□□□□ -0.82
PTPRA-208ENST00000455631 C1orf64Q8NEQ6 169 aa9.95□□□□□ -0.82
PTPRA-208ENST00000455631 KRTAP8-1Q8IUC2 63 aa9.92□□□□□ -0.82
PTPRA-208ENST00000455631 CRIPTQ9P021 101 aa9.92□□□□□ -0.82
PTPRA-208ENST00000455631 CASC2Q6XLA1 102 aa9.91□□□□□ -0.82
PTPRA-208ENST00000455631 SPRR2DP22532 72 aa9.9□□□□□ -0.82
PTPRA-208ENST00000455631 BPY2O14599 106 aa9.88□□□□□ -0.83
PTPRA-208ENST00000455631 CXCL6P80162 114 aa9.88□□□□□ -0.83
PTPRA-208ENST00000455631 Q8N9L7 120 aa9.84□□□□□ -0.83
PTPRA-208ENST00000455631 PRO2289Q9P1D8 64 aa9.83□□□□□ -0.84
PTPRA-208ENST00000455631 UQCR10Q9UDW1 63 aa9.81□□□□□ -0.84
PTPRA-208ENST00000455631 NAA38Q9BRA0 125 aaKnown RBP9.8□□□□□ -0.84
PTPRA-208ENST00000455631 MT1XP80297 61 aa9.75□□□□□ -0.85
PTPRA-208ENST00000455631 PYY3Q5JQD4 70 aa9.75□□□□□ -0.85
PTPRA-208ENST00000455631 LCE3BQ5TA77 95 aa9.68□□□□□ -0.86
PTPRA-208ENST00000455631 GPR98Q8WXG9 6306 aa9.66□□□□□ -0.86
PTPRA-208ENST00000455631 KRTAP12-2P59991 146 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 290.7 ms