RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 MTURNQ8N3F0 131 aa12.87□□□□□ -0.35
MSH2-203ENST00000454849 LOC110117498A0A087WWA1 95 aa12.86□□□□□ -0.35
MSH2-203ENST00000454849 A0A1B0GVX0 72 aa12.84□□□□□ -0.35
MSH2-203ENST00000454849 A0A1W2PPM0 123 aa12.83□□□□□ -0.36
MSH2-203ENST00000454849 M0R2T5 61 aa12.81□□□□□ -0.36
MSH2-203ENST00000454849 C21orf62-AS1Q17RA5 79 aa12.78□□□□□ -0.36
MSH2-203ENST00000454849 J3KT08 172 aa12.77□□□□□ -0.37
MSH2-203ENST00000454849 PDE6GP18545 87 aa12.77□□□□□ -0.37
MSH2-203ENST00000454849 C8orf87E5RJ46 101 aa12.76□□□□□ -0.37
MSH2-203ENST00000454849 KRTAP10-6P60371 365 aaPredicted RBP12.72□□□□□ -0.37
MSH2-203ENST00000454849 H3BT86 120 aa12.71□□□□□ -0.37
MSH2-203ENST00000454849 FLGP20930 4061 aaPredicted RBP12.71□□□□□ -0.37
MSH2-203ENST00000454849 NDUFB1O75438 58 aa12.7□□□□□ -0.38
MSH2-203ENST00000454849 A0A1B0GW54 56 aa12.69□□□□□ -0.38
MSH2-203ENST00000454849 LORP23490 312 aaPredicted RBP12.69□□□□□ -0.38
MSH2-203ENST00000454849 NREPQ16612 68 aa12.68□□□□□ -0.38
MSH2-203ENST00000454849 SPCS1Q9Y6A9 102 aa12.68□□□□□ -0.38
MSH2-203ENST00000454849 IGKV3D-7A0A0C4DH55 119 aa12.67□□□□□ -0.38
MSH2-203ENST00000454849 A8MWP4 228 aa12.67□□□□□ -0.38
MSH2-203ENST00000454849 C8orf17Q9NRJ1 99 aa12.65□□□□□ -0.38
MSH2-203ENST00000454849 LCE2DQ5TA82 110 aaPredicted RBP12.63□□□□□ -0.39
MSH2-203ENST00000454849 COL5A1-AS1Q5SY13 56 aa12.6□□□□□ -0.39
MSH2-203ENST00000454849 SMCPP49901 116 aaPredicted RBP12.58□□□□□ -0.4
MSH2-203ENST00000454849 ZCCHC13Q8WW36 166 aaKnown RBP12.58□□□□□ -0.4
MSH2-203ENST00000454849 HRES1P13985 223 aa12.57□□□□□ -0.4
MSH2-203ENST00000454849 PRR15Q8IV56 129 aa12.57□□□□□ -0.4
MSH2-203ENST00000454849 FAM236DA0A1B0GTK5 79 aa12.55□□□□□ -0.4
MSH2-203ENST00000454849 FAM236CP0DP71 79 aa12.55□□□□□ -0.4
MSH2-203ENST00000454849 Q8N9P0 234 aaPredicted RBP12.55□□□□□ -0.4
MSH2-203ENST00000454849 Q6ZVQ6 151 aa12.54□□□□□ -0.4
MSH2-203ENST00000454849 PCP4L1A6NKN8 68 aa12.52□□□□□ -0.41
MSH2-203ENST00000454849 KRTAP9-6A0A140TA67 174 aa12.51□□□□□ -0.41
MSH2-203ENST00000454849 K7EQZ3 153 aa12.5□□□□□ -0.41
MSH2-203ENST00000454849 MMP24-AS1A0A0U1RRL7 71 aa12.48□□□□□ -0.41
MSH2-203ENST00000454849 MPLKIPQ8TAP9 179 aa12.48□□□□□ -0.41
MSH2-203ENST00000454849 RBM12B-AS1Q9P1G2 102 aa12.48□□□□□ -0.41
MSH2-203ENST00000454849 K7EP34 96 aa12.47□□□□□ -0.41
MSH2-203ENST00000454849 SPINK7P58062 85 aa12.47□□□□□ -0.41
MSH2-203ENST00000454849 PRO0461Q9UI25 63 aa12.47□□□□□ -0.41
MSH2-203ENST00000454849 BPY2O14599 106 aa12.46□□□□□ -0.41
MSH2-203ENST00000454849 Q8N9L7 120 aa12.41□□□□□ -0.42
MSH2-203ENST00000454849 TMEM254Q8TBM7 123 aa12.41□□□□□ -0.42
MSH2-203ENST00000454849 MRPL34Q9BQ48 92 aaKnown RBP12.41□□□□□ -0.42
MSH2-203ENST00000454849 hDV103S1A0JD37 113 aa12.4□□□□□ -0.42
MSH2-203ENST00000454849 NDUFS5O43920 106 aa12.38□□□□□ -0.43
MSH2-203ENST00000454849 FSIP2Q5CZC0 6907 aa12.35□□□□□ -0.43
MSH2-203ENST00000454849 LINC00846Q9NV44 126 aa12.34□□□□□ -0.43
MSH2-203ENST00000454849 WFDC13Q8IUB5 93 aa12.33□□□□□ -0.44
MSH2-203ENST00000454849 KRTAP9-8Q9BYQ0 159 aa12.32□□□□□ -0.44
MSH2-203ENST00000454849 CRCT1Q9UGL9 99 aa12.31□□□□□ -0.44
MSH2-203ENST00000454849 GTF2H5Q6ZYL4 71 aa12.3□□□□□ -0.44
MSH2-203ENST00000454849 CASC2Q6XLA1 102 aa12.25□□□□□ -0.45
MSH2-203ENST00000454849 UBL5Q9BZL1 73 aa12.25□□□□□ -0.45
MSH2-203ENST00000454849 Q5W150 140 aa12.23□□□□□ -0.45
MSH2-203ENST00000454849 ETDBQ3ZM63 59 aa12.21□□□□□ -0.45
MSH2-203ENST00000454849 HCG22E2RYF7 251 aa12.2□□□□□ -0.46
MSH2-203ENST00000454849 F8W1H4 67 aa12.2□□□□□ -0.46
MSH2-203ENST00000454849 IGKV2D-30A0A075B6S6 120 aa12.18□□□□□ -0.46
MSH2-203ENST00000454849 MT2AP02795 61 aa12.18□□□□□ -0.46
MSH2-203ENST00000454849 IGKV2-30P06310 120 aa12.18□□□□□ -0.46
MSH2-203ENST00000454849 MT1FP04733 61 aa12.1□□□□□ -0.47
MSH2-203ENST00000454849 KRTAP10-10P60014 251 aa12.06□□□□□ -0.48
MSH2-203ENST00000454849 C7orf65Q6ZTY9 151 aa12.05□□□□□ -0.48
MSH2-203ENST00000454849 CXCL6P80162 114 aa12.03□□□□□ -0.48
MSH2-203ENST00000454849 H1FX-AS1Q4G0G2 97 aa11.99□□□□□ -0.49
MSH2-203ENST00000454849 C4orf26Q17RF5 130 aa11.95□□□□□ -0.5
MSH2-203ENST00000454849 KRTAP9-3Q9BYQ3 159 aa11.93□□□□□ -0.5
MSH2-203ENST00000454849 USH2AO75445 5202 aa11.9□□□□□ -0.5
MSH2-203ENST00000454849 LCE2BO14633 110 aa11.88□□□□□ -0.51
MSH2-203ENST00000454849 ACYP1P07311 99 aa11.82□□□□□ -0.52
MSH2-203ENST00000454849 TP53AIP1Q9HCN2 124 aa11.81□□□□□ -0.52
MSH2-203ENST00000454849 A0A1B0GV90 55 aa11.79□□□□□ -0.52
MSH2-203ENST00000454849 KRTAP3-1Q9BYR8 98 aa11.76□□□□□ -0.53
MSH2-203ENST00000454849 SSPOA2VEC9 5147 aa11.76□□□□□ -0.53
MSH2-203ENST00000454849 FAM240AA0A1B0GVK7 77 aa11.75□□□□□ -0.53
MSH2-203ENST00000454849 HIST1H4AP62805 103 aaKnown RBP11.74□□□□□ -0.53
MSH2-203ENST00000454849 C1orf64Q8NEQ6 169 aa11.71□□□□□ -0.53
MSH2-203ENST00000454849 C5orf47Q569G3 176 aa11.68□□□□□ -0.54
MSH2-203ENST00000454849 ATP5EP2Q5VTU8 51 aa11.68□□□□□ -0.54
MSH2-203ENST00000454849 CYP4F30PQ9H0H9 118 aa11.63□□□□□ -0.55
MSH2-203ENST00000454849 A0A087WVE0 104 aa11.62□□□□□ -0.55
MSH2-203ENST00000454849 KRTAP19-1Q8IUB9 90 aa11.62□□□□□ -0.55
MSH2-203ENST00000454849 S4R3F8 94 aa11.62□□□□□ -0.55
MSH2-203ENST00000454849 TRAV22A0A0B4J277 110 aa11.61□□□□□ -0.55
MSH2-203ENST00000454849 LINC00643Q86TS7 51 aa11.58□□□□□ -0.56
MSH2-203ENST00000454849 LCA10Q71F78 164 aa11.56□□□□□ -0.56
MSH2-203ENST00000454849 LOC101927531A0A1B0GV80 90 aa11.52□□□□□ -0.57
MSH2-203ENST00000454849 UQCRQO14949 82 aa11.52□□□□□ -0.57
MSH2-203ENST00000454849 H0Y9P7 68 aa11.51□□□□□ -0.57
MSH2-203ENST00000454849 CSAG1Q6PB30 78 aa11.49□□□□□ -0.57
MSH2-203ENST00000454849 FCGBPQ9Y6R7 5405 aaPredicted RBP11.49□□□□□ -0.57
MSH2-203ENST00000454849 FAM236AA0A1B0GUQ0 79 aa11.46□□□□□ -0.57
MSH2-203ENST00000454849 FAM236BA0A1B0GV22 79 aa11.46□□□□□ -0.57
MSH2-203ENST00000454849 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.45□□□□□ -0.58
MSH2-203ENST00000454849 KRTAP3-3Q9BYR6 98 aa11.41□□□□□ -0.58
MSH2-203ENST00000454849 ATOX1O00244 68 aa11.4□□□□□ -0.58
MSH2-203ENST00000454849 KRTAP19-6Q3LI70 58 aa11.35□□□□□ -0.59
MSH2-203ENST00000454849 LINC00208Q96KT6 92 aa11.35□□□□□ -0.59
MSH2-203ENST00000454849 J3QR89 54 aa11.33□□□□□ -0.6
MSH2-203ENST00000454849 OCR1Q9BZK8 76 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms