RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 H0Y9P7 68 aa6.44□□□□□ -1.38
GTF3C2-206ENST00000454704 A0A087WTM6 91 aa6.43□□□□□ -1.38
GTF3C2-206ENST00000454704 C1orf64Q8NEQ6 169 aa6.43□□□□□ -1.38
GTF3C2-206ENST00000454704 A0A0G2JQZ4 141 aa6.42□□□□□ -1.38
GTF3C2-206ENST00000454704 MMP24-AS1A0A0U1RRL7 71 aa6.42□□□□□ -1.38
GTF3C2-206ENST00000454704 KRTAP10-2P60368 255 aa6.42□□□□□ -1.38
GTF3C2-206ENST00000454704 DEFB116Q30KQ4 102 aa6.42□□□□□ -1.38
GTF3C2-206ENST00000454704 ASB16-AS1Q495Z4 193 aa6.42□□□□□ -1.38
GTF3C2-206ENST00000454704 LINC00208Q96KT6 92 aa6.42□□□□□ -1.38
GTF3C2-206ENST00000454704 FAM229BQ4G0N7 80 aa6.42□□□□□ -1.38
GTF3C2-206ENST00000454704 PLAC8Q9NZF1 115 aa6.42□□□□□ -1.38
GTF3C2-206ENST00000454704 IGLV5-52A0A0A0MRZ9 124 aa6.41□□□□□ -1.38
GTF3C2-206ENST00000454704 MYCBP2O75592 4640 aa6.4□□□□□ -1.39
GTF3C2-206ENST00000454704 VPS13BQ7Z7G8 4022 aa6.4□□□□□ -1.39
GTF3C2-206ENST00000454704 C1orf195Q5TG92 126 aa6.39□□□□□ -1.39
GTF3C2-206ENST00000454704 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.39□□□□□ -1.39
GTF3C2-206ENST00000454704 PANO1I0J062 215 aa6.38□□□□□ -1.39
GTF3C2-206ENST00000454704 ZNF861PO60384 105 aa6.38□□□□□ -1.39
GTF3C2-206ENST00000454704 Q96NJ1 140 aa6.38□□□□□ -1.39
GTF3C2-206ENST00000454704 A0A1B0GVX0 72 aa6.37□□□□□ -1.39
GTF3C2-206ENST00000454704 CD164Q04900 197 aa6.37□□□□□ -1.39
GTF3C2-206ENST00000454704 MPLKIPQ8TAP9 179 aa6.37□□□□□ -1.39
GTF3C2-206ENST00000454704 C8orf17Q9NRJ1 99 aa6.37□□□□□ -1.39
GTF3C2-206ENST00000454704 FLG2Q5D862 2391 aaPredicted RBP6.35□□□□□ -1.39
GTF3C2-206ENST00000454704 IGLV9-49A0A0B4J1Y8 123 aa6.35□□□□□ -1.39
GTF3C2-206ENST00000454704 PSORS1C2Q9UIG4 136 aa6.35□□□□□ -1.39
GTF3C2-206ENST00000454704 IGLV7-46A0A075B6I9 117 aa6.34□□□□□ -1.39
GTF3C2-206ENST00000454704 Q5VSD8 79 aa6.33□□□□□ -1.4
GTF3C2-206ENST00000454704 MRPL34Q9BQ48 92 aaKnown RBP6.33□□□□□ -1.4
GTF3C2-206ENST00000454704 LIMD2Q9BT23 127 aa6.33□□□□□ -1.4
GTF3C2-206ENST00000454704 SSBP3-AS1Q7Z2R9 100 aa6.32□□□□□ -1.4
GTF3C2-206ENST00000454704 BRK1Q8WUW1 75 aa6.32□□□□□ -1.4
GTF3C2-206ENST00000454704 DNAH8Q96JB1 4490 aa6.31□□□□□ -1.4
GTF3C2-206ENST00000454704 C8orf87E5RJ46 101 aa6.3□□□□□ -1.4
GTF3C2-206ENST00000454704 KRTAP10-1P60331 282 aa6.3□□□□□ -1.4
GTF3C2-206ENST00000454704 SRRM2Q9UQ35 2752 aaKnown RBP6.29□□□□□ -1.4
GTF3C2-206ENST00000454704 IGLV7-43P04211 117 aa6.29□□□□□ -1.4
GTF3C2-206ENST00000454704 SMR3BP02814 79 aaPredicted RBP6.28□□□□□ -1.4
GTF3C2-206ENST00000454704 LOC101927531A0A1B0GV80 90 aa6.27□□□□□ -1.41
GTF3C2-206ENST00000454704 IGHV6-1A0A0B4J1U7 121 aa6.26□□□□□ -1.41
GTF3C2-206ENST00000454704 PRR4Q16378 134 aa6.26□□□□□ -1.41
GTF3C2-206ENST00000454704 Q8N9P0 234 aaPredicted RBP6.25□□□□□ -1.41
GTF3C2-206ENST00000454704 NDUFS5O43920 106 aa6.24□□□□□ -1.41
GTF3C2-206ENST00000454704 COA5Q86WW8 74 aa6.24□□□□□ -1.41
GTF3C2-206ENST00000454704 FAM229AH3BQW9 127 aa6.23□□□□□ -1.41
GTF3C2-206ENST00000454704 J3QL48 77 aa6.22□□□□□ -1.41
GTF3C2-206ENST00000454704 HMCN2Q8NDA2 5059 aa6.22□□□□□ -1.41
GTF3C2-206ENST00000454704 LRP1Q07954 4544 aaKnown RBP6.19□□□□□ -1.42
GTF3C2-206ENST00000454704 PSPHP1O15172 72 aa6.19□□□□□ -1.42
GTF3C2-206ENST00000454704 Q5VV11 94 aa6.19□□□□□ -1.42
GTF3C2-206ENST00000454704 Q75L30 129 aa6.19□□□□□ -1.42
GTF3C2-206ENST00000454704 UBR4Q5T4S7 5183 aa6.19□□□□□ -1.42
GTF3C2-206ENST00000454704 A8MUN3 132 aa6.18□□□□□ -1.42
GTF3C2-206ENST00000454704 PCOTHQ58A44 107 aa6.18□□□□□ -1.42
GTF3C2-206ENST00000454704 LINC01558Q9Y6Z2 57 aa6.18□□□□□ -1.42
GTF3C2-206ENST00000454704 FAT3Q8TDW7 4589 aa6.18□□□□□ -1.42
GTF3C2-206ENST00000454704 KRTAP13-3Q3SY46 172 aa6.17□□□□□ -1.42
GTF3C2-206ENST00000454704 CIRBP-AS1Q8TBR5 109 aa6.17□□□□□ -1.42
GTF3C2-206ENST00000454704 Q6ZSA8 131 aa6.16□□□□□ -1.42
GTF3C2-206ENST00000454704 PRR15LQ9BU68 103 aa6.15□□□□□ -1.43
GTF3C2-206ENST00000454704 ANAPC11Q9NYG5 84 aa6.15□□□□□ -1.43
GTF3C2-206ENST00000454704 PLA2G1BP04054 148 aaKnown RBP6.14□□□□□ -1.43
GTF3C2-206ENST00000454704 LINC00313P59037 77 aa6.14□□□□□ -1.43
GTF3C2-206ENST00000454704 SPINK6Q6UWN8 80 aa6.14□□□□□ -1.43
GTF3C2-206ENST00000454704 PKHD1L1Q86WI1 4243 aa6.13□□□□□ -1.43
GTF3C2-206ENST00000454704 CHKB-CPT1BH3BT56 60 aa6.13□□□□□ -1.43
GTF3C2-206ENST00000454704 ACYP2P14621 99 aa6.13□□□□□ -1.43
GTF3C2-206ENST00000454704 A0A087X002 238 aa6.12□□□□□ -1.43
GTF3C2-206ENST00000454704 HRES1P13985 223 aa6.12□□□□□ -1.43
GTF3C2-206ENST00000454704 NOTCH2NLQ7Z3S9 236 aa6.12□□□□□ -1.43
GTF3C2-206ENST00000454704 DMAC1Q96GE9 116 aa6.08□□□□□ -1.44
GTF3C2-206ENST00000454704 CDC42SE1Q9NRR8 79 aa6.08□□□□□ -1.44
GTF3C2-206ENST00000454704 KRTAP10-4P60372 401 aaPredicted RBP6.08□□□□□ -1.44
GTF3C2-206ENST00000454704 Q5W150 140 aa6.08□□□□□ -1.44
GTF3C2-206ENST00000454704 ATP11AUNQ6ZP68 121 aa6.08□□□□□ -1.44
GTF3C2-206ENST00000454704 IGKV2-30P06310 120 aa6.07□□□□□ -1.44
GTF3C2-206ENST00000454704 RPS29P62273 56 aaKnown RBP6.07□□□□□ -1.44
GTF3C2-206ENST00000454704 KRTAP13-2Q52LG2 175 aa6.07□□□□□ -1.44
GTF3C2-206ENST00000454704 A6NED7 52 aa6.06□□□□□ -1.44
GTF3C2-206ENST00000454704 PRR26Q8N8Z3 221 aa6.06□□□□□ -1.44
GTF3C2-206ENST00000454704 SPINK1P00995 79 aa6.05□□□□□ -1.44
GTF3C2-206ENST00000454704 PMAIP1Q13794 54 aa6.05□□□□□ -1.44
GTF3C2-206ENST00000454704 C4orf48Q5BLP8 95 aa6.04□□□□□ -1.44
GTF3C2-206ENST00000454704 SPAG11AQ6PDA7 123 aa6.04□□□□□ -1.44
GTF3C2-206ENST00000454704 KRTAP16-1A8MUX0 517 aa6.03□□□□□ -1.44
GTF3C2-206ENST00000454704 KRTAP1-4P0C5Y4 121 aa6.03□□□□□ -1.44
GTF3C2-206ENST00000454704 TNXBP22105 4242 aa5.99□□□□□ -1.45
GTF3C2-206ENST00000454704 LCA10Q71F78 164 aa5.99□□□□□ -1.45
GTF3C2-206ENST00000454704 TYMSOSQ8TAI1 123 aa5.99□□□□□ -1.45
GTF3C2-206ENST00000454704 LRP2P98164 4655 aa5.97□□□□□ -1.45
GTF3C2-206ENST00000454704 RNF213Q63HN8 5207 aa5.97□□□□□ -1.45
GTF3C2-206ENST00000454704 KTN1-AS1Q86SY8 53 aa5.95□□□□□ -1.46
GTF3C2-206ENST00000454704 MT1HL1P0DM35 61 aa5.94□□□□□ -1.46
GTF3C2-206ENST00000454704 IGKV2D-30A0A075B6S6 120 aa5.93□□□□□ -1.46
GTF3C2-206ENST00000454704 C7orf65Q6ZTY9 151 aa5.92□□□□□ -1.46
GTF3C2-206ENST00000454704 LINC00304Q8N9R0 145 aa5.92□□□□□ -1.46
GTF3C2-206ENST00000454704 SPTSSBQ8NFR3 76 aa5.92□□□□□ -1.46
GTF3C2-206ENST00000454704 A0A1B0GU69 56 aa5.91□□□□□ -1.46
GTF3C2-206ENST00000454704 A6NN06 94 aa5.91□□□□□ -1.46
GTF3C2-206ENST00000454704 SPINK7P58062 85 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms