RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 TSTD3H0UI37 97 aa8.29□□□□□ -1.08
NCKIPSD-208ENST00000454134 FAM236DA0A1B0GTK5 79 aa8.28□□□□□ -1.08
NCKIPSD-208ENST00000454134 C8orf87E5RJ46 101 aa8.28□□□□□ -1.08
NCKIPSD-208ENST00000454134 FAM236CP0DP71 79 aa8.28□□□□□ -1.08
NCKIPSD-208ENST00000454134 KRTAP9-8Q9BYQ0 159 aa8.27□□□□□ -1.09
NCKIPSD-208ENST00000454134 HRES1P13985 223 aa8.26□□□□□ -1.09
NCKIPSD-208ENST00000454134 ATXN8Q156A1 80 aa8.26□□□□□ -1.09
NCKIPSD-208ENST00000454134 Q6ZQT0 140 aa8.26□□□□□ -1.09
NCKIPSD-208ENST00000454134 J3KT08 172 aa8.24□□□□□ -1.09
NCKIPSD-208ENST00000454134 MPLKIPQ8TAP9 179 aa8.24□□□□□ -1.09
NCKIPSD-208ENST00000454134 RBM12B-AS1Q9P1G2 102 aa8.23□□□□□ -1.09
NCKIPSD-208ENST00000454134 C21orf62-AS1Q17RA5 79 aa8.22□□□□□ -1.09
NCKIPSD-208ENST00000454134 JMJD7-PLA2G4BH0Y9G9 81 aa8.21□□□□□ -1.1
NCKIPSD-208ENST00000454134 ZCCHC13Q8WW36 166 aaKnown RBP8.2□□□□□ -1.1
NCKIPSD-208ENST00000454134 LOC110117498A0A087WWA1 95 aa8.19□□□□□ -1.1
NCKIPSD-208ENST00000454134 NDUFB1O75438 58 aa8.18□□□□□ -1.1
NCKIPSD-208ENST00000454134 C14orf132Q9NPU4 83 aa8.18□□□□□ -1.1
NCKIPSD-208ENST00000454134 A8MWP4 228 aa8.16□□□□□ -1.1
NCKIPSD-208ENST00000454134 IGKV3D-7A0A0C4DH55 119 aa8.15□□□□□ -1.1
NCKIPSD-208ENST00000454134 MT2AP02795 61 aa8.15□□□□□ -1.1
NCKIPSD-208ENST00000454134 SPINK7P58062 85 aa8.15□□□□□ -1.1
NCKIPSD-208ENST00000454134 BATFQ16520 125 aa8.15□□□□□ -1.1
NCKIPSD-208ENST00000454134 Q8N9P0 234 aaPredicted RBP8.15□□□□□ -1.1
NCKIPSD-208ENST00000454134 C8orf17Q9NRJ1 99 aa8.15□□□□□ -1.1
NCKIPSD-208ENST00000454134 PDE6GP18545 87 aa8.14□□□□□ -1.11
NCKIPSD-208ENST00000454134 A0A1B0GW54 56 aa8.13□□□□□ -1.11
NCKIPSD-208ENST00000454134 LYRM7Q5U5X0 104 aa8.13□□□□□ -1.11
NCKIPSD-208ENST00000454134 MT1FP04733 61 aa8.09□□□□□ -1.11
NCKIPSD-208ENST00000454134 NREPQ16612 68 aa8.09□□□□□ -1.11
NCKIPSD-208ENST00000454134 Q6ZVQ6 151 aa8.08□□□□□ -1.12
NCKIPSD-208ENST00000454134 MTURNQ8N3F0 131 aa8.08□□□□□ -1.12
NCKIPSD-208ENST00000454134 PRR15Q8IV56 129 aa8.07□□□□□ -1.12
NCKIPSD-208ENST00000454134 C9orf118A6NHY6 69 aa8.05□□□□□ -1.12
NCKIPSD-208ENST00000454134 WFDC13Q8IUB5 93 aa8.05□□□□□ -1.12
NCKIPSD-208ENST00000454134 KRTAP10-10P60014 251 aa8.04□□□□□ -1.12
NCKIPSD-208ENST00000454134 MMP24-AS1A0A0U1RRL7 71 aa8.03□□□□□ -1.12
NCKIPSD-208ENST00000454134 TAX1BP3O14907 124 aa8.03□□□□□ -1.12
NCKIPSD-208ENST00000454134 USH2AO75445 5202 aa8.02□□□□□ -1.13
NCKIPSD-208ENST00000454134 A0A1W2PPM0 123 aa8.01□□□□□ -1.13
NCKIPSD-208ENST00000454134 H3BT86 120 aa8.01□□□□□ -1.13
NCKIPSD-208ENST00000454134 MRPL34Q9BQ48 92 aaKnown RBP8.01□□□□□ -1.13
NCKIPSD-208ENST00000454134 K7EQZ3 153 aa8□□□□□ -1.13
NCKIPSD-208ENST00000454134 LCE2BO14633 110 aa8□□□□□ -1.13
NCKIPSD-208ENST00000454134 TMEM254Q8TBM7 123 aa8□□□□□ -1.13
NCKIPSD-208ENST00000454134 KRTAP9-3Q9BYQ3 159 aa8□□□□□ -1.13
NCKIPSD-208ENST00000454134 hDV103S1A0JD37 113 aa7.97□□□□□ -1.13
NCKIPSD-208ENST00000454134 NDUFS5O43920 106 aa7.96□□□□□ -1.14
NCKIPSD-208ENST00000454134 SSPOA2VEC9 5147 aa7.95□□□□□ -1.14
NCKIPSD-208ENST00000454134 BPY2O14599 106 aa7.94□□□□□ -1.14
NCKIPSD-208ENST00000454134 COL5A1-AS1Q5SY13 56 aa7.94□□□□□ -1.14
NCKIPSD-208ENST00000454134 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.91□□□□□ -1.14
NCKIPSD-208ENST00000454134 SPCS1Q9Y6A9 102 aa7.91□□□□□ -1.14
NCKIPSD-208ENST00000454134 Q8N9L7 120 aa7.9□□□□□ -1.14
NCKIPSD-208ENST00000454134 KRTAP19-1Q8IUB9 90 aa7.89□□□□□ -1.15
NCKIPSD-208ENST00000454134 Q5W150 140 aa7.88□□□□□ -1.15
NCKIPSD-208ENST00000454134 IGKV2D-30A0A075B6S6 120 aa7.87□□□□□ -1.15
NCKIPSD-208ENST00000454134 IGKV2-30P06310 120 aa7.87□□□□□ -1.15
NCKIPSD-208ENST00000454134 SMCPP49901 116 aaPredicted RBP7.87□□□□□ -1.15
NCKIPSD-208ENST00000454134 PCP4L1A6NKN8 68 aa7.85□□□□□ -1.15
NCKIPSD-208ENST00000454134 H1FX-AS1Q4G0G2 97 aa7.85□□□□□ -1.15
NCKIPSD-208ENST00000454134 CASC2Q6XLA1 102 aa7.84□□□□□ -1.15
NCKIPSD-208ENST00000454134 KRTAP9-7A8MTY7 169 aa7.82□□□□□ -1.16
NCKIPSD-208ENST00000454134 HCG22E2RYF7 251 aa7.82□□□□□ -1.16
NCKIPSD-208ENST00000454134 C7orf65Q6ZTY9 151 aa7.82□□□□□ -1.16
NCKIPSD-208ENST00000454134 K7EP34 96 aa7.81□□□□□ -1.16
NCKIPSD-208ENST00000454134 FCGBPQ9Y6R7 5405 aaPredicted RBP7.81□□□□□ -1.16
NCKIPSD-208ENST00000454134 LINC00846Q9NV44 126 aa7.79□□□□□ -1.16
NCKIPSD-208ENST00000454134 PRO0461Q9UI25 63 aa7.78□□□□□ -1.16
NCKIPSD-208ENST00000454134 GTF2H5Q6ZYL4 71 aa7.77□□□□□ -1.17
NCKIPSD-208ENST00000454134 C4orf26Q17RF5 130 aa7.75□□□□□ -1.17
NCKIPSD-208ENST00000454134 UBL5Q9BZL1 73 aa7.75□□□□□ -1.17
NCKIPSD-208ENST00000454134 CXCL6P80162 114 aa7.73□□□□□ -1.17
NCKIPSD-208ENST00000454134 F8W1H4 67 aa7.7□□□□□ -1.18
NCKIPSD-208ENST00000454134 KRTAP19-6Q3LI70 58 aa7.69□□□□□ -1.18
NCKIPSD-208ENST00000454134 C5orf47Q569G3 176 aa7.63□□□□□ -1.19
NCKIPSD-208ENST00000454134 KRTAP3-1Q9BYR8 98 aa7.63□□□□□ -1.19
NCKIPSD-208ENST00000454134 ETDBQ3ZM63 59 aa7.61□□□□□ -1.19
NCKIPSD-208ENST00000454134 C1orf64Q8NEQ6 169 aa7.58□□□□□ -1.2
NCKIPSD-208ENST00000454134 MACF1Q9UPN3 7388 aaKnown RBP7.58□□□□□ -1.2
NCKIPSD-208ENST00000454134 TP53AIP1Q9HCN2 124 aa7.56□□□□□ -1.2
NCKIPSD-208ENST00000454134 S4R3F8 94 aa7.56□□□□□ -1.2
NCKIPSD-208ENST00000454134 FAM236AA0A1B0GUQ0 79 aa7.53□□□□□ -1.2
NCKIPSD-208ENST00000454134 FAM236BA0A1B0GV22 79 aa7.53□□□□□ -1.2
NCKIPSD-208ENST00000454134 LCA10Q71F78 164 aa7.52□□□□□ -1.21
NCKIPSD-208ENST00000454134 CSAG1Q6PB30 78 aa7.5□□□□□ -1.21
NCKIPSD-208ENST00000454134 ACYP1P07311 99 aa7.48□□□□□ -1.21
NCKIPSD-208ENST00000454134 SYNE2Q8WXH0 6885 aaKnown RBP7.47□□□□□ -1.21
NCKIPSD-208ENST00000454134 CYP4F30PQ9H0H9 118 aa7.45□□□□□ -1.22
NCKIPSD-208ENST00000454134 FAM240AA0A1B0GVK7 77 aa7.44□□□□□ -1.22
NCKIPSD-208ENST00000454134 A0A1B0GV90 55 aa7.42□□□□□ -1.22
NCKIPSD-208ENST00000454134 TRAV22A0A0B4J277 110 aa7.41□□□□□ -1.22
NCKIPSD-208ENST00000454134 KRTAP3-3Q9BYR6 98 aa7.41□□□□□ -1.22
NCKIPSD-208ENST00000454134 MT1BP07438 61 aa7.4□□□□□ -1.22
NCKIPSD-208ENST00000454134 A0A087WVE0 104 aa7.39□□□□□ -1.23
NCKIPSD-208ENST00000454134 SPRR2GQ9BYE4 73 aa7.39□□□□□ -1.23
NCKIPSD-208ENST00000454134 Q5VV11 94 aa7.38□□□□□ -1.23
NCKIPSD-208ENST00000454134 LOC101927531A0A1B0GV80 90 aa7.37□□□□□ -1.23
NCKIPSD-208ENST00000454134 ATP5EP2Q5VTU8 51 aa7.37□□□□□ -1.23
NCKIPSD-208ENST00000454134 HIST1H4AP62805 103 aaKnown RBP7.36□□□□□ -1.23
NCKIPSD-208ENST00000454134 KRTAP19-8Q3LI54 63 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms