RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 PRR4Q16378 134 aa6.9□□□□□ -1.31
VTA1-203ENST00000452973 SSBP3-AS1Q7Z2R9 100 aa6.9□□□□□ -1.31
VTA1-203ENST00000452973 C8orf17Q9NRJ1 99 aa6.9□□□□□ -1.31
VTA1-203ENST00000452973 H0Y9P7 68 aa6.89□□□□□ -1.31
VTA1-203ENST00000452973 SACSQ9NZJ4 4579 aa6.88□□□□□ -1.31
VTA1-203ENST00000452973 PLA2G1BP04054 148 aaKnown RBP6.87□□□□□ -1.31
VTA1-203ENST00000452973 FP248Q71RG6 208 aaPredicted RBP6.86□□□□□ -1.31
VTA1-203ENST00000452973 ZCCHC13Q8WW36 166 aaKnown RBP6.85□□□□□ -1.31
VTA1-203ENST00000452973 SERP1Q9Y6X1 66 aa6.85□□□□□ -1.31
VTA1-203ENST00000452973 KRTAP1-4P0C5Y4 121 aa6.85□□□□□ -1.31
VTA1-203ENST00000452973 TRAV22A0A0B4J277 110 aa6.83□□□□□ -1.32
VTA1-203ENST00000452973 CD164Q04900 197 aa6.83□□□□□ -1.32
VTA1-203ENST00000452973 C1orf64Q8NEQ6 169 aa6.83□□□□□ -1.32
VTA1-203ENST00000452973 ATP5EP56381 51 aaPredicted RBP6.81□□□□□ -1.32
VTA1-203ENST00000452973 FAM229BQ4G0N7 80 aa6.81□□□□□ -1.32
VTA1-203ENST00000452973 TYMSOSQ8TAI1 123 aa6.81□□□□□ -1.32
VTA1-203ENST00000452973 MRPL34Q9BQ48 92 aaKnown RBP6.81□□□□□ -1.32
VTA1-203ENST00000452973 C4orf48Q5BLP8 95 aa6.8□□□□□ -1.32
VTA1-203ENST00000452973 ASB16-AS1Q495Z4 193 aa6.79□□□□□ -1.32
VTA1-203ENST00000452973 MPLKIPQ8TAP9 179 aa6.79□□□□□ -1.32
VTA1-203ENST00000452973 PRR26Q8N8Z3 221 aa6.79□□□□□ -1.32
VTA1-203ENST00000452973 A0A1B0GVY2 172 aa6.78□□□□□ -1.32
VTA1-203ENST00000452973 PCOTHQ58A44 107 aa6.78□□□□□ -1.32
VTA1-203ENST00000452973 KMT2CQ8NEZ4 4911 aaKnown RBP6.78□□□□□ -1.32
VTA1-203ENST00000452973 PMAIP1Q13794 54 aa6.77□□□□□ -1.32
VTA1-203ENST00000452973 TP53AIP1Q9HCN2 124 aa6.77□□□□□ -1.32
VTA1-203ENST00000452973 SMIM26A0A096LP01 95 aa6.77□□□□□ -1.33
VTA1-203ENST00000452973 RETNLBQ9BQ08 111 aa6.75□□□□□ -1.33
VTA1-203ENST00000452973 DYNC1H1Q14204 4646 aaKnown RBP6.75□□□□□ -1.33
VTA1-203ENST00000452973 LINC00313P59037 77 aa6.75□□□□□ -1.33
VTA1-203ENST00000452973 H3BPC8 53 aa6.74□□□□□ -1.33
VTA1-203ENST00000452973 LIMD2Q9BT23 127 aa6.73□□□□□ -1.33
VTA1-203ENST00000452973 FAT1Q14517 4588 aa6.72□□□□□ -1.33
VTA1-203ENST00000452973 Q5W150 140 aa6.72□□□□□ -1.33
VTA1-203ENST00000452973 RYR2Q92736 4967 aa6.7□□□□□ -1.34
VTA1-203ENST00000452973 C8orf87E5RJ46 101 aa6.7□□□□□ -1.34
VTA1-203ENST00000452973 LINC00304Q8N9R0 145 aa6.7□□□□□ -1.34
VTA1-203ENST00000452973 SPINK1P00995 79 aa6.69□□□□□ -1.34
VTA1-203ENST00000452973 CYP4F30PQ9H0H9 118 aa6.67□□□□□ -1.34
VTA1-203ENST00000452973 APOBP04114 4563 aaKnown RBP6.65□□□□□ -1.35
VTA1-203ENST00000452973 KRTAP10-4P60372 401 aaPredicted RBP6.65□□□□□ -1.35
VTA1-203ENST00000452973 SPANXA2-OT1Q8N9U9 137 aa6.65□□□□□ -1.35
VTA1-203ENST00000452973 IGLV7-46A0A075B6I9 117 aa6.62□□□□□ -1.35
VTA1-203ENST00000452973 LOC101927531A0A1B0GV80 90 aa6.61□□□□□ -1.35
VTA1-203ENST00000452973 Q8N9P0 234 aaPredicted RBP6.61□□□□□ -1.35
VTA1-203ENST00000452973 KRTAP16-1A8MUX0 517 aa6.61□□□□□ -1.35
VTA1-203ENST00000452973 KRTAP13-3Q3SY46 172 aa6.61□□□□□ -1.35
VTA1-203ENST00000452973 FAM229AH3BQW9 127 aa6.6□□□□□ -1.35
VTA1-203ENST00000452973 SPAG11AQ6PDA7 123 aa6.6□□□□□ -1.35
VTA1-203ENST00000452973 C9orf92A6NGG3 77 aa6.59□□□□□ -1.36
VTA1-203ENST00000452973 COA5Q86WW8 74 aa6.58□□□□□ -1.36
VTA1-203ENST00000452973 IGKV2D-30A0A075B6S6 120 aa6.57□□□□□ -1.36
VTA1-203ENST00000452973 A8MU10 97 aa6.57□□□□□ -1.36
VTA1-203ENST00000452973 IGKV2-30P06310 120 aa6.57□□□□□ -1.36
VTA1-203ENST00000452973 FLG2Q5D862 2391 aaPredicted RBP6.57□□□□□ -1.36
VTA1-203ENST00000452973 RBM12B-AS1Q9P1G2 102 aa6.57□□□□□ -1.36
VTA1-203ENST00000452973 PSPHP1O15172 72 aa6.56□□□□□ -1.36
VTA1-203ENST00000452973 RYR3Q15413 4870 aa6.55□□□□□ -1.36
VTA1-203ENST00000452973 Q5VSD8 79 aa6.54□□□□□ -1.36
VTA1-203ENST00000452973 HRES1P13985 223 aa6.53□□□□□ -1.36
VTA1-203ENST00000452973 RPS29P62273 56 aaKnown RBP6.53□□□□□ -1.36
VTA1-203ENST00000452973 DMBT1Q9UGM3 2413 aaPredicted RBP6.52□□□□□ -1.37
VTA1-203ENST00000452973 H3BS24 57 aa6.52□□□□□ -1.37
VTA1-203ENST00000452973 LRP1Q07954 4544 aaKnown RBP6.5□□□□□ -1.37
VTA1-203ENST00000452973 Q1T7F1 81 aa6.5□□□□□ -1.37
VTA1-203ENST00000452973 Q8N1X5 172 aa6.49□□□□□ -1.37
VTA1-203ENST00000452973 A8MUN3 132 aa6.48□□□□□ -1.37
VTA1-203ENST00000452973 KRTAP17-1Q9BYP8 105 aa6.46□□□□□ -1.38
VTA1-203ENST00000452973 HSPG2P98160 4391 aa6.46□□□□□ -1.38
VTA1-203ENST00000452973 PKHD1L1Q86WI1 4243 aa6.46□□□□□ -1.38
VTA1-203ENST00000452973 SPTSSBQ8NFR3 76 aa6.45□□□□□ -1.38
VTA1-203ENST00000452973 ACYP2P14621 99 aa6.44□□□□□ -1.38
VTA1-203ENST00000452973 PRR15LQ9BU68 103 aa6.44□□□□□ -1.38
VTA1-203ENST00000452973 CHKB-CPT1BH3BT56 60 aa6.43□□□□□ -1.38
VTA1-203ENST00000452973 KTN1-AS1Q86SY8 53 aa6.43□□□□□ -1.38
VTA1-203ENST00000452973 KIAA1109Q2LD37 5005 aa6.43□□□□□ -1.38
VTA1-203ENST00000452973 DMAC1Q96GE9 116 aa6.41□□□□□ -1.38
VTA1-203ENST00000452973 C7orf65Q6ZTY9 151 aa6.41□□□□□ -1.38
VTA1-203ENST00000452973 KRTAP10-8P60410 259 aa6.4□□□□□ -1.39
VTA1-203ENST00000452973 Q5VV11 94 aa6.38□□□□□ -1.39
VTA1-203ENST00000452973 A8MUU9 505 aa6.38□□□□□ -1.39
VTA1-203ENST00000452973 MYCBP2O75592 4640 aa6.37□□□□□ -1.39
VTA1-203ENST00000452973 C20orf166-AS1Q96NR2 134 aa6.37□□□□□ -1.39
VTA1-203ENST00000452973 RYR1P21817 5038 aa6.37□□□□□ -1.39
VTA1-203ENST00000452973 TNXBP22105 4242 aa6.35□□□□□ -1.39
VTA1-203ENST00000452973 EPPK1P58107 5090 aaKnown RBP6.34□□□□□ -1.39
VTA1-203ENST00000452973 SPINK7P58062 85 aa6.32□□□□□ -1.4
VTA1-203ENST00000452973 LINC01558Q9Y6Z2 57 aa6.32□□□□□ -1.4
VTA1-203ENST00000452973 A6NED7 52 aa6.3□□□□□ -1.4
VTA1-203ENST00000452973 FAT3Q8TDW7 4589 aa6.28□□□□□ -1.4
VTA1-203ENST00000452973 Q75L30 129 aa6.28□□□□□ -1.4
VTA1-203ENST00000452973 MT1HL1P0DM35 61 aa6.27□□□□□ -1.41
VTA1-203ENST00000452973 ATP11AUNQ6ZP68 121 aa6.27□□□□□ -1.41
VTA1-203ENST00000452973 LCA10Q71F78 164 aa6.25□□□□□ -1.41
VTA1-203ENST00000452973 A6NN06 94 aa6.24□□□□□ -1.41
VTA1-203ENST00000452973 KRTAP4-5Q9BYR2 181 aa6.24□□□□□ -1.41
VTA1-203ENST00000452973 A0A1B0GU69 56 aa6.23□□□□□ -1.41
VTA1-203ENST00000452973 XP32Q5T750 250 aa6.22□□□□□ -1.41
VTA1-203ENST00000452973 PRAC1Q96KF2 57 aa6.21□□□□□ -1.41
VTA1-203ENST00000452973 KRTAP3-1Q9BYR8 98 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms