RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 C9JAW5 83 aa6.94□□□□□ -1.3
CHD3-206ENST00000452447 H3BT86 120 aa6.94□□□□□ -1.3
CHD3-206ENST00000452447 UQCRQO14949 82 aa6.93□□□□□ -1.3
CHD3-206ENST00000452447 RPL37P61927 97 aaKnown RBP6.92□□□□□ -1.3
CHD3-206ENST00000452447 IGFL1Q6UW32 110 aa6.92□□□□□ -1.3
CHD3-206ENST00000452447 BAALC-AS2P0C853 105 aa6.91□□□□□ -1.3
CHD3-206ENST00000452447 LCE2CQ5TA81 110 aa6.91□□□□□ -1.3
CHD3-206ENST00000452447 JMJD7-PLA2G4BH0Y9G9 81 aa6.89□□□□□ -1.31
CHD3-206ENST00000452447 KRTAP19-2Q3LHN2 52 aa6.89□□□□□ -1.31
CHD3-206ENST00000452447 KRTAP9-6A0A140TA67 174 aa6.86□□□□□ -1.31
CHD3-206ENST00000452447 FSIP2Q5CZC0 6907 aa6.86□□□□□ -1.31
CHD3-206ENST00000452447 MT1HP80294 61 aa6.86□□□□□ -1.31
CHD3-206ENST00000452447 LINC00643Q86TS7 51 aa6.86□□□□□ -1.31
CHD3-206ENST00000452447 DSCR8Q96T75 97 aa6.84□□□□□ -1.31
CHD3-206ENST00000452447 COX7CP15954 63 aa6.83□□□□□ -1.32
CHD3-206ENST00000452447 RBM3P98179 157 aaKnown RBP6.83□□□□□ -1.32
CHD3-206ENST00000452447 OBSCN-AS1Q96MR7 158 aa6.83□□□□□ -1.32
CHD3-206ENST00000452447 FLGP20930 4061 aaPredicted RBP6.83□□□□□ -1.32
CHD3-206ENST00000452447 PDE6GP18545 87 aa6.82□□□□□ -1.32
CHD3-206ENST00000452447 TMEM258P61165 79 aa6.82□□□□□ -1.32
CHD3-206ENST00000452447 COX6B2Q6YFQ2 88 aa6.82□□□□□ -1.32
CHD3-206ENST00000452447 ATOX1O00244 68 aa6.82□□□□□ -1.32
CHD3-206ENST00000452447 FAM236AA0A1B0GUQ0 79 aa6.81□□□□□ -1.32
CHD3-206ENST00000452447 FAM236BA0A1B0GV22 79 aa6.81□□□□□ -1.32
CHD3-206ENST00000452447 ATP11AUNQ6ZP68 121 aa6.81□□□□□ -1.32
CHD3-206ENST00000452447 M0R2T5 61 aa6.79□□□□□ -1.32
CHD3-206ENST00000452447 Q75L30 129 aa6.79□□□□□ -1.32
CHD3-206ENST00000452447 HIST1H4AP62805 103 aaKnown RBP6.78□□□□□ -1.32
CHD3-206ENST00000452447 Q96NJ1 140 aa6.78□□□□□ -1.32
CHD3-206ENST00000452447 A0A087WSZ3 146 aa6.77□□□□□ -1.33
CHD3-206ENST00000452447 A0A1B0GW54 56 aa6.76□□□□□ -1.33
CHD3-206ENST00000452447 LOC110117498A0A087WWA1 95 aa6.75□□□□□ -1.33
CHD3-206ENST00000452447 TRBV7-4A0A0J9YYF1 115 aa6.74□□□□□ -1.33
CHD3-206ENST00000452447 C14orf132Q9NPU4 83 aa6.74□□□□□ -1.33
CHD3-206ENST00000452447 CCKP06307 115 aa6.74□□□□□ -1.33
CHD3-206ENST00000452447 KRTAP10-6P60371 365 aaPredicted RBP6.74□□□□□ -1.33
CHD3-206ENST00000452447 LORP23490 312 aaPredicted RBP6.73□□□□□ -1.33
CHD3-206ENST00000452447 SERP2Q8N6R1 65 aa6.72□□□□□ -1.33
CHD3-206ENST00000452447 Q6ZQT0 140 aa6.71□□□□□ -1.34
CHD3-206ENST00000452447 C20orf166-AS1Q96NR2 134 aa6.7□□□□□ -1.34
CHD3-206ENST00000452447 A0A1W2PNM2 257 aa6.69□□□□□ -1.34
CHD3-206ENST00000452447 CRCT1Q9UGL9 99 aa6.69□□□□□ -1.34
CHD3-206ENST00000452447 PRO0628Q9UI54 55 aa6.69□□□□□ -1.34
CHD3-206ENST00000452447 A8MUU9 505 aa6.69□□□□□ -1.34
CHD3-206ENST00000452447 DSCR10P59022 87 aa6.67□□□□□ -1.34
CHD3-206ENST00000452447 IGKV4-1P06312 121 aa6.65□□□□□ -1.34
CHD3-206ENST00000452447 LINC00313P59037 77 aa6.65□□□□□ -1.35
CHD3-206ENST00000452447 UBL5Q9BZL1 73 aa6.63□□□□□ -1.35
CHD3-206ENST00000452447 ATP5EP2Q5VTU8 51 aa6.62□□□□□ -1.35
CHD3-206ENST00000452447 SERP1Q9Y6X1 66 aa6.62□□□□□ -1.35
CHD3-206ENST00000452447 C4orf26Q17RF5 130 aa6.61□□□□□ -1.35
CHD3-206ENST00000452447 DEFB116Q30KQ4 102 aa6.61□□□□□ -1.35
CHD3-206ENST00000452447 NREPQ16612 68 aa6.6□□□□□ -1.35
CHD3-206ENST00000452447 LINC00472Q9H8W2 130 aa6.59□□□□□ -1.35
CHD3-206ENST00000452447 IGHV6-1A0A0B4J1U7 121 aa6.57□□□□□ -1.36
CHD3-206ENST00000452447 KRTAP16-1A8MUX0 517 aa6.57□□□□□ -1.36
CHD3-206ENST00000452447 SMIM26A0A096LP01 95 aa6.57□□□□□ -1.36
CHD3-206ENST00000452447 ATP5EP56381 51 aaPredicted RBP6.57□□□□□ -1.36
CHD3-206ENST00000452447 FAM236DA0A1B0GTK5 79 aa6.56□□□□□ -1.36
CHD3-206ENST00000452447 FAM236CP0DP71 79 aa6.56□□□□□ -1.36
CHD3-206ENST00000452447 NOTCH2NLQ7Z3S9 236 aa6.56□□□□□ -1.36
CHD3-206ENST00000452447 LINC00846Q9NV44 126 aa6.55□□□□□ -1.36
CHD3-206ENST00000452447 Q6ZVQ6 151 aa6.53□□□□□ -1.36
CHD3-206ENST00000452447 CYSTM1Q9H1C7 97 aa6.53□□□□□ -1.36
CHD3-206ENST00000452447 NDUFC1O43677 76 aa6.52□□□□□ -1.36
CHD3-206ENST00000452447 NDUFB1O75438 58 aa6.52□□□□□ -1.36
CHD3-206ENST00000452447 A0A1B0GVX0 72 aa6.52□□□□□ -1.37
CHD3-206ENST00000452447 C8orf87E5RJ46 101 aa6.52□□□□□ -1.37
CHD3-206ENST00000452447 BPY2O14599 106 aa6.52□□□□□ -1.37
CHD3-206ENST00000452447 V9GYY9 64 aa6.52□□□□□ -1.37
CHD3-206ENST00000452447 RBM12B-AS1Q9P1G2 102 aa6.51□□□□□ -1.37
CHD3-206ENST00000452447 TRAV7A0A075B6U4 112 aa6.5□□□□□ -1.37
CHD3-206ENST00000452447 CXCL6P80162 114 aa6.5□□□□□ -1.37
CHD3-206ENST00000452447 SEC61GP60059 68 aa6.49□□□□□ -1.37
CHD3-206ENST00000452447 KLKP1Q107X0 134 aa6.49□□□□□ -1.37
CHD3-206ENST00000452447 IGKV3D-7A0A0C4DH55 119 aa6.48□□□□□ -1.37
CHD3-206ENST00000452447 KRTAP9-8Q9BYQ0 159 aa6.47□□□□□ -1.37
CHD3-206ENST00000452447 H7BZZ5 65 aa6.46□□□□□ -1.38
CHD3-206ENST00000452447 HRES1P13985 223 aa6.46□□□□□ -1.38
CHD3-206ENST00000452447 A8MWP4 228 aa6.45□□□□□ -1.38
CHD3-206ENST00000452447 MPLKIPQ8TAP9 179 aa6.45□□□□□ -1.38
CHD3-206ENST00000452447 USH2AO75445 5202 aa6.44□□□□□ -1.38
CHD3-206ENST00000452447 C20orf197Q8N268 126 aa6.43□□□□□ -1.38
CHD3-206ENST00000452447 ZCCHC13Q8WW36 166 aaKnown RBP6.43□□□□□ -1.38
CHD3-206ENST00000452447 A0A087WVE0 104 aa6.42□□□□□ -1.38
CHD3-206ENST00000452447 SPINK7P58062 85 aa6.4□□□□□ -1.39
CHD3-206ENST00000452447 PRR15Q8IV56 129 aa6.4□□□□□ -1.39
CHD3-206ENST00000452447 SSPOA2VEC9 5147 aa6.39□□□□□ -1.39
CHD3-206ENST00000452447 Q8N9P0 234 aaPredicted RBP6.39□□□□□ -1.39
CHD3-206ENST00000452447 K7EQZ3 153 aa6.38□□□□□ -1.39
CHD3-206ENST00000452447 C8orf17Q9NRJ1 99 aa6.38□□□□□ -1.39
CHD3-206ENST00000452447 MT2AP02795 61 aa6.37□□□□□ -1.39
CHD3-206ENST00000452447 LCE2BO14633 110 aa6.36□□□□□ -1.39
CHD3-206ENST00000452447 HCG22E2RYF7 251 aa6.34□□□□□ -1.39
CHD3-206ENST00000452447 BRK1Q8WUW1 75 aa6.34□□□□□ -1.39
CHD3-206ENST00000452447 KRTAP10-10P60014 251 aa6.33□□□□□ -1.4
CHD3-206ENST00000452447 hDV103S1A0JD37 113 aa6.32□□□□□ -1.4
CHD3-206ENST00000452447 Q8N9L7 120 aa6.32□□□□□ -1.4
CHD3-206ENST00000452447 MT1FP04733 61 aa6.31□□□□□ -1.4
CHD3-206ENST00000452447 CASC2Q6XLA1 102 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms