RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 A0A1B0GVX0 72 aa13.41□□□□□ -0.26
USP42-204ENST00000451154 FCGBPQ9Y6R7 5405 aaPredicted RBP13.39□□□□□ -0.27
USP42-204ENST00000451154 C8orf87E5RJ46 101 aa13.39□□□□□ -0.27
USP42-204ENST00000451154 LCE2BO14633 110 aa13.39□□□□□ -0.27
USP42-204ENST00000451154 KRTAP10-10P60014 251 aa13.39□□□□□ -0.27
USP42-204ENST00000451154 RBM3P98179 157 aaKnown RBP13.38□□□□□ -0.27
USP42-204ENST00000451154 SCGB1C2P0DMR2 95 aa13.36□□□□□ -0.27
USP42-204ENST00000451154 KRTAP9-3Q9BYQ3 159 aa13.36□□□□□ -0.27
USP42-204ENST00000451154 DSCR8Q96T75 97 aa13.35□□□□□ -0.27
USP42-204ENST00000451154 ZCCHC13Q8WW36 166 aaKnown RBP13.31□□□□□ -0.28
USP42-204ENST00000451154 UQCR10Q9UDW1 63 aa13.3□□□□□ -0.28
USP42-204ENST00000451154 BAALC-AS2P0C853 105 aa13.28□□□□□ -0.28
USP42-204ENST00000451154 SPINK7P58062 85 aa13.28□□□□□ -0.28
USP42-204ENST00000451154 KRTAP19-1Q8IUB9 90 aa13.28□□□□□ -0.28
USP42-204ENST00000451154 MTURNQ8N3F0 131 aa13.28□□□□□ -0.28
USP42-204ENST00000451154 C9JAW5 83 aa13.26□□□□□ -0.29
USP42-204ENST00000451154 J3KT08 172 aa13.26□□□□□ -0.29
USP42-204ENST00000451154 Q6ZQT0 140 aa13.24□□□□□ -0.29
USP42-204ENST00000451154 C21orf62-AS1Q17RA5 79 aa13.19□□□□□ -0.3
USP42-204ENST00000451154 Q8N9P0 234 aaPredicted RBP13.19□□□□□ -0.3
USP42-204ENST00000451154 NDUFB1O75438 58 aa13.18□□□□□ -0.3
USP42-204ENST00000451154 C8orf17Q9NRJ1 99 aa13.13□□□□□ -0.31
USP42-204ENST00000451154 LYRM7Q5U5X0 104 aa13.12□□□□□ -0.31
USP42-204ENST00000451154 A8MWP4 228 aa13.1□□□□□ -0.31
USP42-204ENST00000451154 IGKV3D-7A0A0C4DH55 119 aa13.08□□□□□ -0.32
USP42-204ENST00000451154 WFDC13Q8IUB5 93 aa13.08□□□□□ -0.32
USP42-204ENST00000451154 TMA7Q9Y2S6 64 aaKnown RBP13.08□□□□□ -0.32
USP42-204ENST00000451154 NAA38Q9BRA0 125 aaKnown RBP13.06□□□□□ -0.32
USP42-204ENST00000451154 JMJD7-PLA2G4BH0Y9G9 81 aa13.05□□□□□ -0.32
USP42-204ENST00000451154 LOC110117498A0A087WWA1 95 aa13.04□□□□□ -0.32
USP42-204ENST00000451154 ATXN8Q156A1 80 aa13.04□□□□□ -0.32
USP42-204ENST00000451154 Q6ZVQ6 151 aa13.02□□□□□ -0.33
USP42-204ENST00000451154 A0A1B0GW54 56 aa13.01□□□□□ -0.33
USP42-204ENST00000451154 MACF1Q9UPN3 7388 aaKnown RBP13.01□□□□□ -0.33
USP42-204ENST00000451154 C14orf132Q9NPU4 83 aa12.98□□□□□ -0.33
USP42-204ENST00000451154 SYNE2Q8WXH0 6885 aaKnown RBP12.97□□□□□ -0.33
USP42-204ENST00000451154 PDE6GP18545 87 aa12.97□□□□□ -0.33
USP42-204ENST00000451154 PRR15Q8IV56 129 aa12.96□□□□□ -0.33
USP42-204ENST00000451154 M0R143 59 aa12.92□□□□□ -0.34
USP42-204ENST00000451154 NREPQ16612 68 aa12.92□□□□□ -0.34
USP42-204ENST00000451154 KRTAP19-6Q3LI70 58 aa12.92□□□□□ -0.34
USP42-204ENST00000451154 LINC00846Q9NV44 126 aa12.92□□□□□ -0.34
USP42-204ENST00000451154 MMP24-AS1A0A0U1RRL7 71 aa12.88□□□□□ -0.35
USP42-204ENST00000451154 MRPL34Q9BQ48 92 aaKnown RBP12.88□□□□□ -0.35
USP42-204ENST00000451154 TMEM254Q8TBM7 123 aa12.86□□□□□ -0.35
USP42-204ENST00000451154 H1FX-AS1Q4G0G2 97 aa12.83□□□□□ -0.36
USP42-204ENST00000451154 hDV103S1A0JD37 113 aa12.8□□□□□ -0.36
USP42-204ENST00000451154 NDUFS5O43920 106 aa12.8□□□□□ -0.36
USP42-204ENST00000451154 K7EQZ3 153 aa12.78□□□□□ -0.36
USP42-204ENST00000451154 IGKV2D-30A0A075B6S6 120 aa12.71□□□□□ -0.37
USP42-204ENST00000451154 IGKV2-30P06310 120 aa12.71□□□□□ -0.37
USP42-204ENST00000451154 Q5W150 140 aa12.69□□□□□ -0.38
USP42-204ENST00000451154 BATFQ16520 125 aa12.66□□□□□ -0.38
USP42-204ENST00000451154 BPY2O14599 106 aa12.65□□□□□ -0.38
USP42-204ENST00000451154 C7orf65Q6ZTY9 151 aa12.63□□□□□ -0.39
USP42-204ENST00000451154 H3BT86 120 aa12.6□□□□□ -0.39
USP42-204ENST00000451154 Q8N9L7 120 aa12.57□□□□□ -0.4
USP42-204ENST00000451154 SMIM6P0DI80 62 aa12.56□□□□□ -0.4
USP42-204ENST00000451154 C9orf118A6NHY6 69 aa12.54□□□□□ -0.4
USP42-204ENST00000451154 C4orf26Q17RF5 130 aa12.54□□□□□ -0.4
USP42-204ENST00000451154 CASC2Q6XLA1 102 aa12.54□□□□□ -0.4
USP42-204ENST00000451154 HCG22E2RYF7 251 aa12.53□□□□□ -0.4
USP42-204ENST00000451154 TSTD3H0UI37 97 aa12.51□□□□□ -0.41
USP42-204ENST00000451154 A0A1W2PPM0 123 aa12.5□□□□□ -0.41
USP42-204ENST00000451154 KRTAP6-3Q3LI67 103 aa12.5□□□□□ -0.41
USP42-204ENST00000451154 TAX1BP3O14907 124 aa12.48□□□□□ -0.41
USP42-204ENST00000451154 C5orf47Q569G3 176 aa12.43□□□□□ -0.42
USP42-204ENST00000451154 CXCL6P80162 114 aa12.41□□□□□ -0.42
USP42-204ENST00000451154 KRTAP3-1Q9BYR8 98 aa12.36□□□□□ -0.43
USP42-204ENST00000451154 FAM236AA0A1B0GUQ0 79 aa12.35□□□□□ -0.43
USP42-204ENST00000451154 FAM236BA0A1B0GV22 79 aa12.35□□□□□ -0.43
USP42-204ENST00000451154 SMCPP49901 116 aaPredicted RBP12.31□□□□□ -0.44
USP42-204ENST00000451154 SPCS1Q9Y6A9 102 aa12.29□□□□□ -0.44
USP42-204ENST00000451154 S4R3F8 94 aa12.29□□□□□ -0.44
USP42-204ENST00000451154 MT1BP07438 61 aa12.25□□□□□ -0.45
USP42-204ENST00000451154 C1orf64Q8NEQ6 169 aa12.25□□□□□ -0.45
USP42-204ENST00000451154 A6NN06 94 aa12.24□□□□□ -0.45
USP42-204ENST00000451154 CSAG1Q6PB30 78 aa12.24□□□□□ -0.45
USP42-204ENST00000451154 UBL5Q9BZL1 73 aa12.24□□□□□ -0.45
USP42-204ENST00000451154 LCA10Q71F78 164 aa12.22□□□□□ -0.45
USP42-204ENST00000451154 Q5VV11 94 aa12.2□□□□□ -0.46
USP42-204ENST00000451154 NEBP20929 6669 aa12.18□□□□□ -0.46
USP42-204ENST00000451154 SPRR2GQ9BYE4 73 aa12.17□□□□□ -0.46
USP42-204ENST00000451154 KRTAP19-8Q3LI54 63 aa12.16□□□□□ -0.46
USP42-204ENST00000451154 PRO0461Q9UI25 63 aa12.14□□□□□ -0.47
USP42-204ENST00000451154 LOC105371267A0A1B0GV96 52 aa12.13□□□□□ -0.47
USP42-204ENST00000451154 MUC12Q9UKN1 5478 aa12.1□□□□□ -0.47
USP42-204ENST00000451154 TP53AIP1Q9HCN2 124 aa12.07□□□□□ -0.48
USP42-204ENST00000451154 KLKP1Q107X0 134 aa12.04□□□□□ -0.48
USP42-204ENST00000451154 KRTAP10-5P60370 271 aa12.02□□□□□ -0.49
USP42-204ENST00000451154 KRTAP3-3Q9BYR6 98 aa12.02□□□□□ -0.49
USP42-204ENST00000451154 K7EP34 96 aa12□□□□□ -0.49
USP42-204ENST00000451154 COL5A1-AS1Q5SY13 56 aa12□□□□□ -0.49
USP42-204ENST00000451154 CYP4F30PQ9H0H9 118 aa11.94□□□□□ -0.5
USP42-204ENST00000451154 A0A087WVE0 104 aa11.92□□□□□ -0.5
USP42-204ENST00000451154 CRIPTQ9P021 101 aa11.82□□□□□ -0.52
USP42-204ENST00000451154 ETDBQ3ZM63 59 aa11.81□□□□□ -0.52
USP42-204ENST00000451154 IMUPQ9GZP8 106 aa11.79□□□□□ -0.52
USP42-204ENST00000451154 KMT2DO14686 5537 aa11.78□□□□□ -0.52
USP42-204ENST00000451154 TRAV22A0A0B4J277 110 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms