RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 FLG2Q5D862 2391 aaPredicted RBP6.81□□□□□ -1.32
SYVN1-204ENST00000449943 MRPL34Q9BQ48 92 aaKnown RBP6.8□□□□□ -1.32
SYVN1-204ENST00000449943 IGKV2D-30A0A075B6S6 120 aa6.79□□□□□ -1.32
SYVN1-204ENST00000449943 IGKV2-30P06310 120 aa6.79□□□□□ -1.32
SYVN1-204ENST00000449943 DYNC2H1Q8NCM8 4307 aaKnown RBP6.79□□□□□ -1.32
SYVN1-204ENST00000449943 SPAG11AQ6PDA7 123 aa6.79□□□□□ -1.32
SYVN1-204ENST00000449943 COA5Q86WW8 74 aa6.79□□□□□ -1.32
SYVN1-204ENST00000449943 PLAC8Q9NZF1 115 aa6.78□□□□□ -1.32
SYVN1-204ENST00000449943 A0A1B0GVX0 72 aa6.78□□□□□ -1.32
SYVN1-204ENST00000449943 LINC00483Q53H64 154 aa6.78□□□□□ -1.32
SYVN1-204ENST00000449943 CD164Q04900 197 aa6.77□□□□□ -1.33
SYVN1-204ENST00000449943 A0A087X002 238 aa6.77□□□□□ -1.33
SYVN1-204ENST00000449943 PMAIP1Q13794 54 aa6.77□□□□□ -1.33
SYVN1-204ENST00000449943 NOTCH2NLQ7Z3S9 236 aa6.77□□□□□ -1.33
SYVN1-204ENST00000449943 Q8N9P0 234 aaPredicted RBP6.77□□□□□ -1.33
SYVN1-204ENST00000449943 K7ERS5 55 aa6.77□□□□□ -1.33
SYVN1-204ENST00000449943 A8MU10 97 aa6.76□□□□□ -1.33
SYVN1-204ENST00000449943 SMR3BP02814 79 aaPredicted RBP6.76□□□□□ -1.33
SYVN1-204ENST00000449943 Q5VV11 94 aa6.76□□□□□ -1.33
SYVN1-204ENST00000449943 LINC00304Q8N9R0 145 aa6.76□□□□□ -1.33
SYVN1-204ENST00000449943 STARD9Q9P2P6 4700 aa6.75□□□□□ -1.33
SYVN1-204ENST00000449943 IGLV7-46A0A075B6I9 117 aa6.75□□□□□ -1.33
SYVN1-204ENST00000449943 LOC101927531A0A1B0GV80 90 aa6.75□□□□□ -1.33
SYVN1-204ENST00000449943 FRAS1Q86XX4 4008 aa6.74□□□□□ -1.33
SYVN1-204ENST00000449943 ASB16-AS1Q495Z4 193 aa6.73□□□□□ -1.33
SYVN1-204ENST00000449943 ACYP2P14621 99 aa6.71□□□□□ -1.34
SYVN1-204ENST00000449943 DNAH8Q96JB1 4490 aa6.71□□□□□ -1.34
SYVN1-204ENST00000449943 Q6ZR54 194 aa6.71□□□□□ -1.34
SYVN1-204ENST00000449943 VPS13DQ5THJ4 4388 aa6.7□□□□□ -1.34
SYVN1-204ENST00000449943 SPINK1P00995 79 aa6.69□□□□□ -1.34
SYVN1-204ENST00000449943 HECTD4Q9Y4D8 3996 aa6.69□□□□□ -1.34
SYVN1-204ENST00000449943 KMT2AQ03164 3969 aa6.68□□□□□ -1.34
SYVN1-204ENST00000449943 C7orf65Q6ZTY9 151 aa6.68□□□□□ -1.34
SYVN1-204ENST00000449943 DNAH2Q9P225 4427 aa6.67□□□□□ -1.34
SYVN1-204ENST00000449943 TGP01266 2768 aa6.67□□□□□ -1.34
SYVN1-204ENST00000449943 HRES1P13985 223 aa6.65□□□□□ -1.34
SYVN1-204ENST00000449943 Q5W150 140 aa6.65□□□□□ -1.34
SYVN1-204ENST00000449943 PRKDCP78527 4128 aaKnown RBP6.65□□□□□ -1.35
SYVN1-204ENST00000449943 DNAH17Q9UFH2 4485 aa6.64□□□□□ -1.35
SYVN1-204ENST00000449943 ATP11AUNQ6ZP68 121 aa6.63□□□□□ -1.35
SYVN1-204ENST00000449943 MEGF8Q7Z7M0 2845 aa6.63□□□□□ -1.35
SYVN1-204ENST00000449943 Q75L30 129 aa6.62□□□□□ -1.35
SYVN1-204ENST00000449943 KRTAP21-3Q3LHN1 58 aa6.62□□□□□ -1.35
SYVN1-204ENST00000449943 LCA10Q71F78 164 aa6.61□□□□□ -1.35
SYVN1-204ENST00000449943 KRTAP10-2P60368 255 aa6.6□□□□□ -1.35
SYVN1-204ENST00000449943 FBN3Q75N90 2809 aa6.6□□□□□ -1.35
SYVN1-204ENST00000449943 PRR26Q8N8Z3 221 aa6.6□□□□□ -1.35
SYVN1-204ENST00000449943 KRTAP10-1P60331 282 aa6.59□□□□□ -1.35
SYVN1-204ENST00000449943 LINC01558Q9Y6Z2 57 aa6.58□□□□□ -1.36
SYVN1-204ENST00000449943 COX6B2Q6YFQ2 88 aa6.58□□□□□ -1.36
SYVN1-204ENST00000449943 A0A1B0GU69 56 aa6.57□□□□□ -1.36
SYVN1-204ENST00000449943 C9orf92A6NGG3 77 aa6.56□□□□□ -1.36
SYVN1-204ENST00000449943 SPINK7P58062 85 aa6.55□□□□□ -1.36
SYVN1-204ENST00000449943 DNAH6Q9C0G6 4158 aa6.55□□□□□ -1.36
SYVN1-204ENST00000449943 KRTAP13-3Q3SY46 172 aa6.55□□□□□ -1.36
SYVN1-204ENST00000449943 ALMS1Q8TCU4 4167 aa6.54□□□□□ -1.36
SYVN1-204ENST00000449943 CDC42SE1Q9NRR8 79 aa6.53□□□□□ -1.36
SYVN1-204ENST00000449943 DNAH11Q96DT5 4516 aa6.53□□□□□ -1.36
SYVN1-204ENST00000449943 KRTAP13-2Q52LG2 175 aa6.52□□□□□ -1.37
SYVN1-204ENST00000449943 DNAH5Q8TE73 4624 aa6.49□□□□□ -1.37
SYVN1-204ENST00000449943 KTN1-AS1Q86SY8 53 aa6.46□□□□□ -1.38
SYVN1-204ENST00000449943 DMAC1Q96GE9 116 aa6.46□□□□□ -1.38
SYVN1-204ENST00000449943 DNHD1Q96M86 4753 aa6.45□□□□□ -1.38
SYVN1-204ENST00000449943 LRP1BQ9NZR2 4599 aa6.45□□□□□ -1.38
SYVN1-204ENST00000449943 A6NN06 94 aa6.44□□□□□ -1.38
SYVN1-204ENST00000449943 KRTAP16-1A8MUX0 517 aa6.41□□□□□ -1.38
SYVN1-204ENST00000449943 KRTAP1-4P0C5Y4 121 aa6.4□□□□□ -1.38
SYVN1-204ENST00000449943 Q6ZSA8 131 aa6.39□□□□□ -1.39
SYVN1-204ENST00000449943 Q5VSD8 79 aa6.39□□□□□ -1.39
SYVN1-204ENST00000449943 Q8N1X5 172 aa6.37□□□□□ -1.39
SYVN1-204ENST00000449943 UQCR11O14957 56 aa6.37□□□□□ -1.39
SYVN1-204ENST00000449943 HYDINQ4G0P3 5121 aa6.36□□□□□ -1.39
SYVN1-204ENST00000449943 RBM12B-AS1Q9P1G2 102 aa6.35□□□□□ -1.39
SYVN1-204ENST00000449943 PKD1P98161 4303 aa6.34□□□□□ -1.4
SYVN1-204ENST00000449943 VPS13BQ7Z7G8 4022 aa6.33□□□□□ -1.4
SYVN1-204ENST00000449943 FAT2Q9NYQ8 4349 aa6.32□□□□□ -1.4
SYVN1-204ENST00000449943 MIR22HGQ0VDD5 57 aa6.28□□□□□ -1.4
SYVN1-204ENST00000449943 RPS29P62273 56 aaKnown RBP6.28□□□□□ -1.4
SYVN1-204ENST00000449943 PRAC1Q96KF2 57 aa6.27□□□□□ -1.41
SYVN1-204ENST00000449943 M0R2T5 61 aa6.26□□□□□ -1.41
SYVN1-204ENST00000449943 SPATA8Q6RVD6 105 aa6.24□□□□□ -1.41
SYVN1-204ENST00000449943 ADM2Q7Z4H4 148 aa6.24□□□□□ -1.41
SYVN1-204ENST00000449943 PKHD1P08F94 4074 aa6.21□□□□□ -1.42
SYVN1-204ENST00000449943 LINC01554Q52M75 96 aa6.19□□□□□ -1.42
SYVN1-204ENST00000449943 SEC61BP60468 96 aaKnown RBP6.15□□□□□ -1.42
SYVN1-204ENST00000449943 FAT1Q14517 4588 aa6.13□□□□□ -1.43
SYVN1-204ENST00000449943 SPINT4Q6UDR6 99 aa6.12□□□□□ -1.43
SYVN1-204ENST00000449943 DYNC1H1Q14204 4646 aaKnown RBP6.12□□□□□ -1.43
SYVN1-204ENST00000449943 A0A1B0GU33 70 aa6.12□□□□□ -1.43
SYVN1-204ENST00000449943 SACSQ9NZJ4 4579 aa6.11□□□□□ -1.43
SYVN1-204ENST00000449943 CSAG1Q6PB30 78 aa6.1□□□□□ -1.43
SYVN1-204ENST00000449943 A8MUU9 505 aa6.09□□□□□ -1.43
SYVN1-204ENST00000449943 S4R3F8 94 aa6.09□□□□□ -1.43
SYVN1-204ENST00000449943 C20orf166-AS1Q96NR2 134 aa6.09□□□□□ -1.43
SYVN1-204ENST00000449943 KRTAP3-1Q9BYR8 98 aa6.07□□□□□ -1.44
SYVN1-204ENST00000449943 CRIPTQ9P021 101 aa6.07□□□□□ -1.44
SYVN1-204ENST00000449943 A0A0D9SG42 100 aa6.05□□□□□ -1.44
SYVN1-204ENST00000449943 H0YAA0 97 aa6.05□□□□□ -1.44
SYVN1-204ENST00000449943 KRTAP10-4P60372 401 aaPredicted RBP6.02□□□□□ -1.45
SYVN1-204ENST00000449943 APOBP04114 4563 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms